RNA–Protein interactions for RNA: ENST00000427947.7

USP40-204, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2

Gene USP40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-204ENST00000427947 PTDSS1P48651 473 aaKnown RBP5□□□□□ -1.61
USP40-204ENST00000427947 CPT1AP50416 773 aa5□□□□□ -1.61
USP40-204ENST00000427947 DGKEP52429 567 aa5□□□□□ -1.61
USP40-204ENST00000427947 ZXDAP98168 799 aa5□□□□□ -1.61
USP40-204ENST00000427947 EIF2B5Q13144 721 aaKnown RBP5□□□□□ -1.61
USP40-204ENST00000427947 PMS2P11Q13670 270 aa5□□□□□ -1.61
USP40-204ENST00000427947 ARHGEF7Q14155 803 aa5□□□□□ -1.61
USP40-204ENST00000427947 RRAGBQ5VZM2 374 aa5□□□□□ -1.61
USP40-204ENST00000427947 HIBCHQ6NVY1 386 aaPredicted RBP5□□□□□ -1.61
USP40-204ENST00000427947 XRRA1Q6P2D8 792 aa5□□□□□ -1.61
USP40-204ENST00000427947 VWA1Q6PCB0 445 aa5□□□□□ -1.61
USP40-204ENST00000427947 Q6ZNX1 250 aa5□□□□□ -1.61
USP40-204ENST00000427947 ZNF627Q7L945 461 aa5□□□□□ -1.61
USP40-204ENST00000427947 KCTD20Q7Z5Y7 419 aa5□□□□□ -1.61
USP40-204ENST00000427947 MORC1Q86VD1 984 aa5□□□□□ -1.61
USP40-204ENST00000427947 SLC15A3Q8IY34 581 aa5□□□□□ -1.61
USP40-204ENST00000427947 SDR16C5Q8N3Y7 309 aa5□□□□□ -1.61
USP40-204ENST00000427947 SAMD3Q8N6K7 520 aa5□□□□□ -1.61
USP40-204ENST00000427947 BEND2Q8NDZ0 799 aa5□□□□□ -1.61
USP40-204ENST00000427947 ACRBPQ8NEB7 543 aa5□□□□□ -1.61
USP40-204ENST00000427947 SUPT20HQ8NEM7 779 aa5□□□□□ -1.61
USP40-204ENST00000427947 PPP2R3CQ969Q6 453 aa5□□□□□ -1.61
USP40-204ENST00000427947 FBXL20Q96IG2 436 aa5□□□□□ -1.61
USP40-204ENST00000427947 ZC3H10Q96K80 434 aaKnown RBP5□□□□□ -1.61
USP40-204ENST00000427947 SGCZQ96LD1 299 aa5□□□□□ -1.61
USP40-204ENST00000427947 COLEC11Q9BWP8 271 aa5□□□□□ -1.61
USP40-204ENST00000427947 GJB4Q9NTQ9 266 aa5□□□□□ -1.61
USP40-204ENST00000427947 CDY1Q9Y6F8 540 aa5□□□□□ -1.61
USP40-204ENST00000427947 GRID2IPA4D2P6 1211 aa4.99□□□□□ -1.61
USP40-204ENST00000427947 RGS10O43665 173 aa4.99□□□□□ -1.61
USP40-204ENST00000427947 RRP9O43818 475 aaKnown RBP4.99□□□□□ -1.61
USP40-204ENST00000427947 SRGAP2O75044 1071 aa4.99□□□□□ -1.61
USP40-204ENST00000427947 PEX14O75381 377 aa4.99□□□□□ -1.61
USP40-204ENST00000427947 CSF1RP07333 972 aa4.99□□□□□ -1.61
USP40-204ENST00000427947 TPH1P17752 444 aa4.99□□□□□ -1.61
USP40-204ENST00000427947 ADORA2AP29274 412 aa4.99□□□□□ -1.61
USP40-204ENST00000427947 SERPINB3P29508 390 aa4.99□□□□□ -1.61
USP40-204ENST00000427947 NXPH1P58417 271 aa4.99□□□□□ -1.61
USP40-204ENST00000427947 SP2Q02086 613 aa4.99□□□□□ -1.61
USP40-204ENST00000427947 LCE1DQ5T752 114 aa4.99□□□□□ -1.61
USP40-204ENST00000427947 DEPDC1Q5TB30 811 aa4.99□□□□□ -1.61
USP40-204ENST00000427947 USP51Q70EK9 711 aa4.99□□□□□ -1.61
USP40-204ENST00000427947 SPARTQ8N0X7 666 aa4.99□□□□□ -1.61
USP40-204ENST00000427947 SMCR8Q8TEV9 937 aaPredicted RBP4.99□□□□□ -1.61
USP40-204ENST00000427947 TMEM171Q8WVE6 324 aa4.99□□□□□ -1.61
USP40-204ENST00000427947 ATG4AQ8WYN0 398 aa4.99□□□□□ -1.61
USP40-204ENST00000427947 KIAA1191Q96A73 305 aa4.99□□□□□ -1.61
USP40-204ENST00000427947 LRRC46Q96FV0 321 aa4.99□□□□□ -1.61
USP40-204ENST00000427947 SLC39A13Q96H72 371 aa4.99□□□□□ -1.61
USP40-204ENST00000427947 SYBUQ9NX95 663 aa4.99□□□□□ -1.61
USP40-204ENST00000427947 DNMT3BQ9UBC3 853 aaKnown RBP4.99□□□□□ -1.61
USP40-204ENST00000427947 MYO1AQ9UBC5 1043 aa4.99□□□□□ -1.61
USP40-204ENST00000427947 MAST3O60307 1309 aa4.98□□□□□ -1.61
USP40-204ENST00000427947 VWC2LB2RUY7 222 aa4.98□□□□□ -1.61
USP40-204ENST00000427947 PIAS2O75928 621 aa4.98□□□□□ -1.61
USP40-204ENST00000427947 INMTO95050 263 aa4.98□□□□□ -1.61
USP40-204ENST00000427947 HARSP12081 509 aaKnown RBP4.98□□□□□ -1.61
USP40-204ENST00000427947 BTF3P20290 206 aaKnown RBP4.98□□□□□ -1.61
USP40-204ENST00000427947 ABCB4P21439 1286 aa4.98□□□□□ -1.61
USP40-204ENST00000427947 TGM1P22735 817 aa4.98□□□□□ -1.61
USP40-204ENST00000427947 FOLR3P41439 243 aa4.98□□□□□ -1.61
USP40-204ENST00000427947 PDE6CP51160 858 aa4.98□□□□□ -1.61
USP40-204ENST00000427947 FSTL1Q12841 308 aa4.98□□□□□ -1.61
USP40-204ENST00000427947 STK3Q13188 491 aa4.98□□□□□ -1.61
USP40-204ENST00000427947 MPP3Q13368 585 aa4.98□□□□□ -1.61
USP40-204ENST00000427947 OS9Q13438 667 aaPredicted RBP4.98□□□□□ -1.61
USP40-204ENST00000427947 BIRC2Q13490 618 aa4.98□□□□□ -1.61
USP40-204ENST00000427947 PTCHD3Q3KNS1 767 aa4.98□□□□□ -1.61
USP40-204ENST00000427947 ARL13BQ3SXY8 428 aa4.98□□□□□ -1.61
USP40-204ENST00000427947 IZUMO3Q5VZ72 239 aa4.98□□□□□ -1.61
USP40-204ENST00000427947 FCRL6Q6DN72 434 aa4.98□□□□□ -1.61
USP40-204ENST00000427947 BEND5Q7L4P6 421 aa4.98□□□□□ -1.61
USP40-204ENST00000427947 SKAP1Q86WV1 359 aa4.98□□□□□ -1.61
USP40-204ENST00000427947 ULK2Q8IYT8 1036 aa4.98□□□□□ -1.61
USP40-204ENST00000427947 DEPTORQ8TB45 409 aa4.98□□□□□ -1.61
USP40-204ENST00000427947 DNAJB14Q8TBM8 379 aa4.98□□□□□ -1.61
USP40-204ENST00000427947 LINC00476Q8WZB0 136 aa4.98□□□□□ -1.61
USP40-204ENST00000427947 TFAP2BQ92481 460 aa4.98□□□□□ -1.61
USP40-204ENST00000427947 FKBP10Q96AY3 582 aa4.98□□□□□ -1.61
USP40-204ENST00000427947 PGBD1Q96JS3 809 aa4.98□□□□□ -1.61
USP40-204ENST00000427947 COQ10AQ96MF6 247 aa4.98□□□□□ -1.61
USP40-204ENST00000427947 RPS6KC1Q96S38 1066 aa4.98□□□□□ -1.61
USP40-204ENST00000427947 DHX36Q9H2U1 1008 aaKnown RBP4.98□□□□□ -1.61
USP40-204ENST00000427947 GBA2Q9HCG7 927 aaPredicted RBP4.98□□□□□ -1.61
USP40-204ENST00000427947 HEYLQ9NQ87 328 aaPredicted RBP4.98□□□□□ -1.61
USP40-204ENST00000427947 PCDHGB2Q9Y5G2 931 aa4.98□□□□□ -1.61
USP40-204ENST00000427947 CACNA1AO00555 2505 aa4.98□□□□□ -1.61
USP40-204ENST00000427947 ADGRA2Q96PE1 1338 aa4.97□□□□□ -1.61
USP40-204ENST00000427947 TMEM191CA6NGB0 347 aa4.97□□□□□ -1.61
USP40-204ENST00000427947 AQP7P3A6NL99 342 aa4.97□□□□□ -1.61
USP40-204ENST00000427947 CLCA1A8K7I4 914 aa4.97□□□□□ -1.61
USP40-204ENST00000427947 FGF18O76093 207 aa4.97□□□□□ -1.61
USP40-204ENST00000427947 A1BGP04217 495 aa4.97□□□□□ -1.61
USP40-204ENST00000427947 KRT4P19013 534 aa4.97□□□□□ -1.61
USP40-204ENST00000427947 GDF5P43026 501 aa4.97□□□□□ -1.61
USP40-204ENST00000427947 HTR3AP46098 478 aa4.97□□□□□ -1.61
USP40-204ENST00000427947 CLCN2P51788 898 aa4.97□□□□□ -1.61
USP40-204ENST00000427947 SEC24CP53992 1094 aa4.97□□□□□ -1.61
USP40-204ENST00000427947 TAP1Q03518 808 aa4.97□□□□□ -1.61
USP40-204ENST00000427947 BTKQ06187 659 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms