RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 DIAPH2O60879 1101 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 CABYRO75952 493 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 CNPP09543 421 aaKnown RBP5.96□□□□□ -1.46
HERC4-206ENST00000427635 GUCY2CP25092 1073 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 TYK2P29597 1187 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 HOXC12P31275 282 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 RGS7P49802 495 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 HSD17B7P56937 341 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 EIF3EP60228 445 aaKnown RBP5.96□□□□□ -1.46
HERC4-206ENST00000427635 ACTR2P61160 394 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 ATP2C1P98194 919 aaPredicted RBP5.96□□□□□ -1.46
HERC4-206ENST00000427635 ELF2Q15723 593 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 PTGISQ16647 500 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 ZNF827Q17R98 1081 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 KNOP1Q1ED39 458 aaKnown RBP5.96□□□□□ -1.46
HERC4-206ENST00000427635 CLEC16AQ2KHT3 1053 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 SGO1Q5FBB7 561 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 USP17L6PQ6QN14 398 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 PACS1Q6VY07 963 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 JAMLQ86YT9 394 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 RHOT1Q8IXI2 618 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 FIBCD1Q8N539 461 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 PPM1NQ8N819 430 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 C18orf8Q96DM3 657 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 MOV10L1Q9BXT6 1211 aaKnown RBP5.96□□□□□ -1.46
HERC4-206ENST00000427635 PRKD2Q9BZL6 878 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 BCL2L14Q9BZR8 327 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 TRIM4Q9C037 500 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 MYLK2Q9H1R3 596 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 XPNPEP3Q9NQH7 507 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 MRPS17Q9Y2R5 130 aaKnown RBP5.96□□□□□ -1.46
HERC4-206ENST00000427635 PCDHGB3Q9Y5G1 929 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 BIVM-ERCC5R4GMW8 1640 aa5.96□□□□□ -1.46
HERC4-206ENST00000427635 A0A087WUV0 522 aaPredicted RBP5.95□□□□□ -1.46
HERC4-206ENST00000427635 PDZK1P1A8MUH7 402 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 TBC1D4O60343 1298 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 OR6A2O95222 327 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 MYCLP1P12525 358 aaPredicted RBP5.95□□□□□ -1.46
HERC4-206ENST00000427635 PSMC3P17980 439 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 PRIM2P49643 509 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 PSMD7P51665 324 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 EIF3BP55884 814 aaKnown RBP5.95□□□□□ -1.46
HERC4-206ENST00000427635 RPS7P62081 194 aaKnown RBP5.95□□□□□ -1.46
HERC4-206ENST00000427635 QRICH1Q2TAL8 776 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 COLGALT2Q8IYK4 626 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 C12orf50Q8NA57 414 aaPredicted RBP5.95□□□□□ -1.46
HERC4-206ENST00000427635 S100A13Q99584 98 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 EPB41L5Q9HCM4 733 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 NOVA2Q9UNW9 492 aaKnown RBP5.95□□□□□ -1.46
HERC4-206ENST00000427635 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.95□□□□□ -1.46
HERC4-206ENST00000427635 ABCA8O94911 1581 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 KLHL33A6NCF5 533 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 PDHXO00330 501 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 FTCDO95954 541 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 PDX1P52945 283 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 SCRN1Q12765 414 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 INAQ16352 499 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 PRAMEF18Q5VWM3 479 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 XRRA1Q6P2D8 792 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 NLRP9Q7RTR0 991 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 CD302Q8IX05 232 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 EAF2Q96CJ1 260 aaPredicted RBP5.95□□□□□ -1.46
HERC4-206ENST00000427635 LRRC46Q96FV0 321 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 RPRD1AQ96P16 312 aaPredicted RBP5.95□□□□□ -1.46
HERC4-206ENST00000427635 HEMGNQ9BXL5 484 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 ADGRE3Q9BY15 652 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 EPN3Q9H201 632 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 WDCPQ9H6R7 721 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 KRT84Q9NSB2 600 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 USE1Q9NZ43 259 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 AHSPQ9NZD4 102 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 RNF103-CHMP3A0A140T963 221 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 MTSS1O43312 755 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 SOAT2O75908 522 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 WDR47O94967 919 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 ATP5BP06576 529 aaKnown RBP5.95□□□□□ -1.46
HERC4-206ENST00000427635 NDUFA8P51970 172 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 ZNF132P52740 706 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 HNRNPH2P55795 449 aaKnown RBP5.95□□□□□ -1.46
HERC4-206ENST00000427635 TBL3Q12788 808 aaKnown RBP5.95□□□□□ -1.46
HERC4-206ENST00000427635 PDK1Q15118 436 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 CCDC142Q17RM4 750 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 WDR72Q3MJ13 1102 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 CAPRIN2Q6IMN6 1127 aaKnown RBP5.95□□□□□ -1.46
HERC4-206ENST00000427635 LVRNQ6Q4G3 990 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 USP50Q70EL3 339 aaPredicted RBP5.95□□□□□ -1.46
HERC4-206ENST00000427635 LINC00523Q86TU6 105 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 MCEMP1Q8IX19 187 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 ENAHQ8N8S7 591 aaPredicted RBP5.95□□□□□ -1.46
HERC4-206ENST00000427635 FBXO22Q8NEZ5 403 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 TBC1D16Q8TBP0 767 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 SSH3Q8TE77 659 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 MTMR8Q96EF0 704 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 SERAC1Q96JX3 654 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 WNT8AQ9H1J5 351 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 TMEM60Q9H2L4 133 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 ZSWIM6Q9HCJ5 1215 aa5.95□□□□□ -1.46
HERC4-206ENST00000427635 PIH1D3Q9NQM4 214 aaKnown RBP5.95□□□□□ -1.46
HERC4-206ENST00000427635 TDRKHQ9Y2W6 561 aaKnown RBP5.95□□□□□ -1.46
HERC4-206ENST00000427635 POTEFA5A3E0 1075 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms