RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 TRIM65Q6PJ69 517 aa26.71■■□□□ 1.87
HERPUD2-205ENST00000427455 ARHGEF19Q8IW93 802 aa26.71■■□□□ 1.87
HERPUD2-205ENST00000427455 AOPEPQ8N6M6 819 aa26.71■■□□□ 1.87
HERPUD2-205ENST00000427455 UBR7Q8N806 425 aa26.71■■□□□ 1.87
HERPUD2-205ENST00000427455 SLC2A14Q8TDB8 520 aa26.71■■□□□ 1.87
HERPUD2-205ENST00000427455 CRACR2AQ9BSW2 395 aa26.71■■□□□ 1.87
HERPUD2-205ENST00000427455 KRT82Q9NSB4 513 aa26.71■■□□□ 1.87
HERPUD2-205ENST00000427455 GDE1Q9NZC3 331 aa26.71■■□□□ 1.87
HERPUD2-205ENST00000427455 SLC38A8A6NNN8 435 aa26.7■■□□□ 1.86
HERPUD2-205ENST00000427455 F8VP50 259 aa26.7■■□□□ 1.86
HERPUD2-205ENST00000427455 DLL1O00548 723 aa26.7■■□□□ 1.86
HERPUD2-205ENST00000427455 MOSPD3O75425 235 aa26.7■■□□□ 1.86
HERPUD2-205ENST00000427455 HMGA1P17096 107 aaKnown RBP26.7■■□□□ 1.86
HERPUD2-205ENST00000427455 CACNA2D1P54289 1103 aa26.7■■□□□ 1.86
HERPUD2-205ENST00000427455 RAD23BP54727 409 aa26.7■■□□□ 1.86
HERPUD2-205ENST00000427455 NCAPHQ15003 741 aa26.7■■□□□ 1.86
HERPUD2-205ENST00000427455 PAQR9Q6ZVX9 377 aa26.7■■□□□ 1.86
HERPUD2-205ENST00000427455 SLC4A11Q8NBS3 891 aa26.7■■□□□ 1.86
HERPUD2-205ENST00000427455 STKLD1Q8NE28 680 aa26.7■■□□□ 1.86
HERPUD2-205ENST00000427455 SHKBP1Q8TBC3 707 aa26.7■■□□□ 1.86
HERPUD2-205ENST00000427455 TRMT2BQ96GJ1 504 aaKnown RBP26.7■■□□□ 1.86
HERPUD2-205ENST00000427455 TMEM176AQ96HP8 235 aa26.7■■□□□ 1.86
HERPUD2-205ENST00000427455 GCNAQ96QF7 691 aa26.7■■□□□ 1.86
HERPUD2-205ENST00000427455 DMAP1Q9NPF5 467 aaPredicted RBP26.7■■□□□ 1.86
HERPUD2-205ENST00000427455 UXTQ9UBK9 157 aaPredicted RBP26.7■■□□□ 1.86
HERPUD2-205ENST00000427455 LIMD1Q9UGP4 676 aa26.7■■□□□ 1.86
HERPUD2-205ENST00000427455 A0A1W2PRU2 124 aa26.69■■□□□ 1.86
HERPUD2-205ENST00000427455 NRG2O14511 850 aaPredicted RBP26.69■■□□□ 1.86
HERPUD2-205ENST00000427455 GABRR2P28476 465 aa26.69■■□□□ 1.86
HERPUD2-205ENST00000427455 CDC25CP30307 473 aa26.69■■□□□ 1.86
HERPUD2-205ENST00000427455 MTMR3Q13615 1198 aa26.69■■□□□ 1.86
HERPUD2-205ENST00000427455 PHLDB3Q6NSJ2 640 aa26.69■■□□□ 1.86
HERPUD2-205ENST00000427455 GAREM2Q75VX8 874 aa26.69■■□□□ 1.86
HERPUD2-205ENST00000427455 RRAGAQ7L523 313 aa26.69■■□□□ 1.86
HERPUD2-205ENST00000427455 KAT5Q92993 513 aa26.69■■□□□ 1.86
HERPUD2-205ENST00000427455 MYRFLQ96LU7 910 aa26.69■■□□□ 1.86
HERPUD2-205ENST00000427455 HNRNPABQ99729 332 aaKnown RBP26.69■■□□□ 1.86
HERPUD2-205ENST00000427455 IL21Q9HBE4 155 aa26.69■■□□□ 1.86
HERPUD2-205ENST00000427455 TMEM30AQ9NV96 361 aa26.69■■□□□ 1.86
HERPUD2-205ENST00000427455 TAB2Q9NYJ8 693 aa26.69■■□□□ 1.86
HERPUD2-205ENST00000427455 MAGED2Q9UNF1 606 aaPredicted RBP26.69■■□□□ 1.86
HERPUD2-205ENST00000427455 PES1O00541 588 aaKnown RBP26.68■■□□□ 1.86
HERPUD2-205ENST00000427455 AP1G2O75843 785 aa26.68■■□□□ 1.86
HERPUD2-205ENST00000427455 TPM2P07951 284 aa26.68■■□□□ 1.86
HERPUD2-205ENST00000427455 KRT31Q15323 416 aa26.68■■□□□ 1.86
HERPUD2-205ENST00000427455 TEAD2Q15562 447 aa26.68■■□□□ 1.86
HERPUD2-205ENST00000427455 ZSCAN23Q3MJ62 389 aa26.68■■□□□ 1.86
HERPUD2-205ENST00000427455 DENND5BQ6ZUT9 1274 aa26.68■■□□□ 1.86
HERPUD2-205ENST00000427455 ANKRD20A12PQ8NF67 263 aa26.68■■□□□ 1.86
HERPUD2-205ENST00000427455 CYFIP2Q96F07 1278 aa26.68■■□□□ 1.86
HERPUD2-205ENST00000427455 FAM81BQ96LP2 452 aa26.68■■□□□ 1.86
HERPUD2-205ENST00000427455 HEXIM2Q96MH2 286 aaKnown RBP26.68■■□□□ 1.86
HERPUD2-205ENST00000427455 ATXN3LQ9H3M9 355 aa26.68■■□□□ 1.86
HERPUD2-205ENST00000427455 EHD2Q9NZN4 543 aa26.68■■□□□ 1.86
HERPUD2-205ENST00000427455 IGSF9Q9P2J2 1179 aa26.68■■□□□ 1.86
HERPUD2-205ENST00000427455 MUTYHQ9UIF7 546 aa26.68■■□□□ 1.86
HERPUD2-205ENST00000427455 GREB1Q4ZG55 1949 aa26.67■■□□□ 1.86
HERPUD2-205ENST00000427455 FAM200BP0CF97 657 aa26.67■■□□□ 1.86
HERPUD2-205ENST00000427455 ZNF18P17022 549 aa26.67■■□□□ 1.86
HERPUD2-205ENST00000427455 GJA1P17302 382 aa26.67■■□□□ 1.86
HERPUD2-205ENST00000427455 SLC9A1P19634 815 aa26.67■■□□□ 1.86
HERPUD2-205ENST00000427455 ACO1P21399 889 aaKnown RBP26.67■■□□□ 1.86
HERPUD2-205ENST00000427455 PON1P27169 355 aa26.67■■□□□ 1.86
HERPUD2-205ENST00000427455 ADORA2BP29275 332 aa26.67■■□□□ 1.86
HERPUD2-205ENST00000427455 ZNF165P49910 485 aa26.67■■□□□ 1.86
HERPUD2-205ENST00000427455 NFKBIBQ15653 356 aa26.67■■□□□ 1.86
HERPUD2-205ENST00000427455 PTPN21Q16825 1174 aa26.67■■□□□ 1.86
HERPUD2-205ENST00000427455 MTSS1LQ765P7 747 aa26.67■■□□□ 1.86
HERPUD2-205ENST00000427455 ENOSF1Q7L5Y1 443 aa26.67■■□□□ 1.86
HERPUD2-205ENST00000427455 NXPE3Q969Y0 559 aa26.67■■□□□ 1.86
HERPUD2-205ENST00000427455 JAKMIP2Q96AA8 810 aa26.67■■□□□ 1.86
HERPUD2-205ENST00000427455 MCRS1Q96EZ8 462 aa26.67■■□□□ 1.86
HERPUD2-205ENST00000427455 KREMEN1Q96MU8 473 aa26.67■■□□□ 1.86
HERPUD2-205ENST00000427455 KCNK12Q9HB15 430 aa26.67■■□□□ 1.86
HERPUD2-205ENST00000427455 APEX2Q9UBZ4 518 aa26.67■■□□□ 1.86
HERPUD2-205ENST00000427455 PCDHB4Q9Y5E5 795 aa26.67■■□□□ 1.86
HERPUD2-205ENST00000427455 SMTNL1A8MU46 457 aa26.66■■□□□ 1.86
HERPUD2-205ENST00000427455 ANHXE9PGG2 379 aa26.66■■□□□ 1.86
HERPUD2-205ENST00000427455 ASGR2P07307 311 aa26.66■■□□□ 1.86
HERPUD2-205ENST00000427455 HTR4Q13639 388 aa26.66■■□□□ 1.86
HERPUD2-205ENST00000427455 ARHGAP15Q53QZ3 475 aa26.66■■□□□ 1.86
HERPUD2-205ENST00000427455 TMEM270Q6UE05 265 aa26.66■■□□□ 1.86
HERPUD2-205ENST00000427455 KHSRPQ92945 711 aaKnown RBP eCLIP26.66■■□□□ 1.86
HERPUD2-205ENST00000427455 GPR88Q9GZN0 384 aa26.66■■□□□ 1.86
HERPUD2-205ENST00000427455 HSD3B7Q9H2F3 369 aa26.66■■□□□ 1.86
HERPUD2-205ENST00000427455 SLITRK6Q9H5Y7 841 aa26.66■■□□□ 1.86
HERPUD2-205ENST00000427455 CSNK1G1Q9HCP0 422 aa26.66■■□□□ 1.86
HERPUD2-205ENST00000427455 UBE2TQ9NPD8 197 aaPredicted RBP26.66■■□□□ 1.86
HERPUD2-205ENST00000427455 DCXO43602 365 aa26.65■■□□□ 1.86
HERPUD2-205ENST00000427455 PPP1R26Q5T8A7 1209 aaPredicted RBP26.65■■□□□ 1.86
HERPUD2-205ENST00000427455 ARHGAP17Q68EM7 881 aa26.65■■□□□ 1.86
HERPUD2-205ENST00000427455 DHX40Q8IX18 779 aaKnown RBP26.65■■□□□ 1.86
HERPUD2-205ENST00000427455 KCNK16Q96T55 309 aa26.65■■□□□ 1.86
HERPUD2-205ENST00000427455 SMOQ99835 787 aa26.65■■□□□ 1.86
HERPUD2-205ENST00000427455 TTLL2Q9BWV7 592 aa26.65■■□□□ 1.86
HERPUD2-205ENST00000427455 LIMA1Q9UHB6 759 aaKnown RBP26.65■■□□□ 1.86
HERPUD2-205ENST00000427455 SORCS3Q9UPU3 1222 aa26.65■■□□□ 1.86
HERPUD2-205ENST00000427455 PATJQ8NI35 1801 aa26.65■■□□□ 1.86
HERPUD2-205ENST00000427455 OBSL1O75147 1896 aa26.64■■□□□ 1.86
HERPUD2-205ENST00000427455 F11P03951 625 aa26.64■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms