RNA–Protein interactions for RNA: ENST00000427414.2

SH3D19-204, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-204ENST00000427414 CD99L2Q8TCZ2 262 aa9□□□□□ -0.97
SH3D19-204ENST00000427414 MAGOHBQ96A72 148 aaKnown RBP9□□□□□ -0.97
SH3D19-204ENST00000427414 ARHGEF26Q96DR7 871 aa9□□□□□ -0.97
SH3D19-204ENST00000427414 RSRC1Q96IZ7 334 aaKnown RBP9□□□□□ -0.97
SH3D19-204ENST00000427414 ZSWIM1Q9BR11 485 aa9□□□□□ -0.97
SH3D19-204ENST00000427414 FRMD8P1Q9BZ68 369 aaPredicted RBP9□□□□□ -0.97
SH3D19-204ENST00000427414 ELAC1Q9H777 363 aaKnown RBP9□□□□□ -0.97
SH3D19-204ENST00000427414 PRDM16Q9HAZ2 1276 aa9□□□□□ -0.97
SH3D19-204ENST00000427414 FAM105AQ9NUU6 356 aa9□□□□□ -0.97
SH3D19-204ENST00000427414 ADAM22Q9P0K1 906 aa9□□□□□ -0.97
SH3D19-204ENST00000427414 WDR3Q9UNX4 943 aaKnown RBP eCLIP9□□□□□ -0.97
SH3D19-204ENST00000427414 NOC2LQ9Y3T9 749 aaKnown RBP9□□□□□ -0.97
SH3D19-204ENST00000427414 CARNS1A5YM72 827 aa8.99□□□□□ -0.97
SH3D19-204ENST00000427414 C5orf60A6NFR6 353 aa8.99□□□□□ -0.97
SH3D19-204ENST00000427414 SIGLEC16A6NMB1 481 aa8.99□□□□□ -0.97
SH3D19-204ENST00000427414 KCNK3O14649 394 aa8.99□□□□□ -0.97
SH3D19-204ENST00000427414 MGRN1O60291 552 aa8.99□□□□□ -0.97
SH3D19-204ENST00000427414 CHRNA1P02708 482 aa8.99□□□□□ -0.97
SH3D19-204ENST00000427414 TAF6P49848 677 aa8.99□□□□□ -0.97
SH3D19-204ENST00000427414 PEX5P50542 639 aa8.99□□□□□ -0.97
SH3D19-204ENST00000427414 ELF3P78545 371 aaPredicted RBP8.99□□□□□ -0.97
SH3D19-204ENST00000427414 CUL1Q13616 776 aa8.99□□□□□ -0.97
SH3D19-204ENST00000427414 BYSLQ13895 437 aaKnown RBP8.99□□□□□ -0.97
SH3D19-204ENST00000427414 CYP1B1Q16678 543 aa8.99□□□□□ -0.97
SH3D19-204ENST00000427414 SEZ6Q53EL9 994 aa8.99□□□□□ -0.97
SH3D19-204ENST00000427414 C1orf53Q5VUE5 145 aa8.99□□□□□ -0.97
SH3D19-204ENST00000427414 TLDC1Q6P9B6 456 aa8.99□□□□□ -0.97
SH3D19-204ENST00000427414 CXCL17Q6UXB2 119 aa8.99□□□□□ -0.97
SH3D19-204ENST00000427414 POLNQ7Z5Q5 900 aa8.99□□□□□ -0.97
SH3D19-204ENST00000427414 PALB2Q86YC2 1186 aa8.99□□□□□ -0.97
SH3D19-204ENST00000427414 TMEM40Q8WWA1 233 aa8.99□□□□□ -0.97
SH3D19-204ENST00000427414 CCT6BQ92526 530 aa8.99□□□□□ -0.97
SH3D19-204ENST00000427414 P3H4Q92791 437 aa8.99□□□□□ -0.97
SH3D19-204ENST00000427414 NOD2Q9HC29 1040 aa8.99□□□□□ -0.97
SH3D19-204ENST00000427414 COG5Q9UP83 839 aa8.99□□□□□ -0.97
SH3D19-204ENST00000427414 A0A0U1RQF3 1178 aa8.99□□□□□ -0.97
SH3D19-204ENST00000427414 NDC80O14777 642 aa8.99□□□□□ -0.97
SH3D19-204ENST00000427414 ATP6V1G2O95670 118 aa8.99□□□□□ -0.97
SH3D19-204ENST00000427414 ITGA4P13612 1032 aa8.99□□□□□ -0.97
SH3D19-204ENST00000427414 ECHS1P30084 290 aa8.99□□□□□ -0.97
SH3D19-204ENST00000427414 GRK4P32298 578 aa8.99□□□□□ -0.97
SH3D19-204ENST00000427414 VEGFBP49765 207 aa8.99□□□□□ -0.97
SH3D19-204ENST00000427414 FAM189BP81408 668 aa8.99□□□□□ -0.97
SH3D19-204ENST00000427414 SF3A3Q12874 501 aaKnown RBP eCLIP8.99□□□□□ -0.972e-6■□□□□ 11.3
SH3D19-204ENST00000427414 KCTD19Q17RG1 926 aaPredicted RBP8.99□□□□□ -0.97
SH3D19-204ENST00000427414 KRT71Q3SY84 523 aa8.99□□□□□ -0.97
SH3D19-204ENST00000427414 ACCSLQ4AC99 568 aa8.99□□□□□ -0.97
SH3D19-204ENST00000427414 NAIF1Q69YI7 327 aaPredicted RBP8.99□□□□□ -0.97
SH3D19-204ENST00000427414 C12orf50Q8NA57 414 aaPredicted RBP8.99□□□□□ -0.97
SH3D19-204ENST00000427414 APBB2Q92870 758 aa8.99□□□□□ -0.97
SH3D19-204ENST00000427414 SLCO2A1Q92959 643 aa8.99□□□□□ -0.97
SH3D19-204ENST00000427414 TNIP3Q96KP6 325 aa8.99□□□□□ -0.97
SH3D19-204ENST00000427414 EIF2AQ9BY44 585 aaKnown RBP8.99□□□□□ -0.97
SH3D19-204ENST00000427414 KDM4CQ9H3R0 1056 aa8.99□□□□□ -0.97
SH3D19-204ENST00000427414 DDX56Q9NY93 547 aaKnown RBP8.99□□□□□ -0.97
SH3D19-204ENST00000427414 DSEQ9UL01 958 aa8.99□□□□□ -0.97
SH3D19-204ENST00000427414 ST3GAL5Q9UNP4 418 aa8.99□□□□□ -0.97
SH3D19-204ENST00000427414 GOLGB1Q14789 3259 aaKnown RBP8.99□□□□□ -0.97
SH3D19-204ENST00000427414 GOLGA6L10A0A0M3HER8 536 aa8.98□□□□□ -0.97
SH3D19-204ENST00000427414 FAM187AA6NFU0 413 aa8.98□□□□□ -0.97
SH3D19-204ENST00000427414 TMEM191CA6NGB0 347 aa8.98□□□□□ -0.97
SH3D19-204ENST00000427414 DCDC2CA8MYV0 355 aa8.98□□□□□ -0.97
SH3D19-204ENST00000427414 ZNF487B1APH4 448 aa8.98□□□□□ -0.97
SH3D19-204ENST00000427414 ARVCFO00192 962 aa8.98□□□□□ -0.97
SH3D19-204ENST00000427414 CEP104O60308 925 aa8.98□□□□□ -0.97
SH3D19-204ENST00000427414 SKAP2O75563 359 aaPredicted RBP8.98□□□□□ -0.97
SH3D19-204ENST00000427414 DNAJC8O75937 253 aaPredicted RBP8.98□□□□□ -0.97
SH3D19-204ENST00000427414 PGK1P00558 417 aa8.98□□□□□ -0.97
SH3D19-204ENST00000427414 KRT19P08727 400 aa8.98□□□□□ -0.97
SH3D19-204ENST00000427414 CETN2P41208 172 aa8.98□□□□□ -0.97
SH3D19-204ENST00000427414 ACADSBP45954 432 aa8.98□□□□□ -0.97
SH3D19-204ENST00000427414 CDK7P50613 346 aa8.98□□□□□ -0.97
SH3D19-204ENST00000427414 DRG2P55039 364 aaKnown RBP8.98□□□□□ -0.97
SH3D19-204ENST00000427414 RWDD2BP57060 319 aa8.98□□□□□ -0.97
SH3D19-204ENST00000427414 MAMLD1Q13495 774 aa8.98□□□□□ -0.97
SH3D19-204ENST00000427414 DHX34Q14147 1143 aaKnown RBP8.98□□□□□ -0.97
SH3D19-204ENST00000427414 PKDCCQ504Y2 493 aa8.98□□□□□ -0.97
SH3D19-204ENST00000427414 AGBL2Q5U5Z8 902 aa8.98□□□□□ -0.97
SH3D19-204ENST00000427414 SYDE1Q6ZW31 735 aaPredicted RBP8.98□□□□□ -0.97
SH3D19-204ENST00000427414 TAX1BP1Q86VP1 789 aa8.98□□□□□ -0.97
SH3D19-204ENST00000427414 ERICH1Q86X53 443 aa8.98□□□□□ -0.97
SH3D19-204ENST00000427414 KATNAL2Q8IYT4 538 aa8.98□□□□□ -0.97
SH3D19-204ENST00000427414 CCDC26Q8TAB7 109 aa8.98□□□□□ -0.97
SH3D19-204ENST00000427414 LENG1Q96BZ8 264 aaPredicted RBP8.98□□□□□ -0.97
SH3D19-204ENST00000427414 ZBTB10Q96DT7 871 aa8.98□□□□□ -0.97
SH3D19-204ENST00000427414 AP1M1Q9BXS5 423 aa8.98□□□□□ -0.97
SH3D19-204ENST00000427414 NEUROG2Q9H2A3 272 aa8.98□□□□□ -0.97
SH3D19-204ENST00000427414 KPNA7A9QM74 516 aa8.98□□□□□ -0.97
SH3D19-204ENST00000427414 TMEM189-UBE2V1I3L0A0 370 aa8.98□□□□□ -0.97
SH3D19-204ENST00000427414 O00370 1275 aa8.98□□□□□ -0.97
SH3D19-204ENST00000427414 PITPNM1O00562 1244 aa8.98□□□□□ -0.97
SH3D19-204ENST00000427414 ZNF189O75820 626 aaPredicted RBP8.98□□□□□ -0.97
SH3D19-204ENST00000427414 INHAP05111 366 aa8.98□□□□□ -0.97
SH3D19-204ENST00000427414 GHRP10912 638 aa8.98□□□□□ -0.97
SH3D19-204ENST00000427414 ABCB4P21439 1286 aa8.98□□□□□ -0.97
SH3D19-204ENST00000427414 CALRP27797 417 aaKnown RBP8.98□□□□□ -0.97
SH3D19-204ENST00000427414 FLT3P36888 993 aa8.98□□□□□ -0.97
SH3D19-204ENST00000427414 LHX1P48742 406 aa8.98□□□□□ -0.97
SH3D19-204ENST00000427414 GRIK3Q13003 919 aa8.98□□□□□ -0.97
SH3D19-204ENST00000427414 BFSP2Q13515 415 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms