RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 STMN2Q93045 179 aa14.03□□□□□ -0.16
USP42-203ENST00000426246 DDX27Q96GQ7 796 aaKnown RBP14.03□□□□□ -0.16
USP42-203ENST00000426246 MYH9P35579 1960 aaKnown RBP14.03□□□□□ -0.16
USP42-203ENST00000426246 PLXNA1Q9UIW2 1896 aa14.03□□□□□ -0.16
USP42-203ENST00000426246 TXNDC9O14530 226 aa14.02□□□□□ -0.16
USP42-203ENST00000426246 GGPS1O95749 300 aa14.02□□□□□ -0.16
USP42-203ENST00000426246 TOP3BO95985 862 aaKnown RBP14.02□□□□□ -0.16
USP42-203ENST00000426246 ZBTB48P10074 688 aaPredicted RBP14.02□□□□□ -0.16
USP42-203ENST00000426246 TROVE2P10155 538 aaKnown RBP eCLIP14.02□□□□□ -0.16
USP42-203ENST00000426246 GLRA4Q5JXX5 417 aa14.02□□□□□ -0.16
USP42-203ENST00000426246 ABHD15Q6UXT9 468 aa14.02□□□□□ -0.16
USP42-203ENST00000426246 ABRAQ8N0Z2 381 aa14.02□□□□□ -0.16
USP42-203ENST00000426246 MCPH1Q8NEM0 835 aa14.02□□□□□ -0.16
USP42-203ENST00000426246 OLIG1Q8TAK6 271 aa14.02□□□□□ -0.16
USP42-203ENST00000426246 MAIP1Q8WWC4 291 aa14.02□□□□□ -0.16
USP42-203ENST00000426246 PSPC1Q8WXF1 523 aaKnown RBP14.02□□□□□ -0.16
USP42-203ENST00000426246 COPS5Q92905 334 aa14.02□□□□□ -0.16
USP42-203ENST00000426246 PLXNB2O15031 1838 aa14.02□□□□□ -0.16
USP42-203ENST00000426246 ASAP2O43150 1006 aa14.02□□□□□ -0.17
USP42-203ENST00000426246 LPXNO60711 386 aa14.02□□□□□ -0.17
USP42-203ENST00000426246 TAC1P20366 129 aa14.02□□□□□ -0.17
USP42-203ENST00000426246 EPHB1P54762 984 aa14.02□□□□□ -0.17
USP42-203ENST00000426246 ALDH18A1P54886 795 aaKnown RBP14.02□□□□□ -0.17
USP42-203ENST00000426246 TMPRSS15P98073 1019 aa14.02□□□□□ -0.17
USP42-203ENST00000426246 SIX1Q15475 284 aaPredicted RBP14.02□□□□□ -0.17
USP42-203ENST00000426246 TTC7BQ86TV6 843 aa14.02□□□□□ -0.17
USP42-203ENST00000426246 FAM149B1Q96BN6 582 aa14.02□□□□□ -0.17
USP42-203ENST00000426246 ACAP3Q96P50 834 aa14.02□□□□□ -0.17
USP42-203ENST00000426246 UNKQ9C0B0 810 aaKnown RBP14.02□□□□□ -0.17
USP42-203ENST00000426246 LRRC19Q9H756 370 aa14.02□□□□□ -0.17
USP42-203ENST00000426246 INPP5FQ9Y2H2 1132 aa14.02□□□□□ -0.17
USP42-203ENST00000426246 GYG2O15488 501 aa14.02□□□□□ -0.17
USP42-203ENST00000426246 CXCL8P10145 99 aa14.02□□□□□ -0.17
USP42-203ENST00000426246 GMPRP36959 345 aa14.02□□□□□ -0.17
USP42-203ENST00000426246 YARSP54577 528 aaKnown RBP14.02□□□□□ -0.17
USP42-203ENST00000426246 OGDHQ02218 1023 aa14.02□□□□□ -0.17
USP42-203ENST00000426246 CLUL1Q15846 466 aa14.02□□□□□ -0.17
USP42-203ENST00000426246 NAIF1Q69YI7 327 aaPredicted RBP14.02□□□□□ -0.17
USP42-203ENST00000426246 FASTKD5Q7L8L6 764 aaKnown RBP14.02□□□□□ -0.17
USP42-203ENST00000426246 CKAP2Q8WWK9 683 aa14.02□□□□□ -0.17
USP42-203ENST00000426246 PGLYRP2Q96PD5 576 aa14.02□□□□□ -0.17
USP42-203ENST00000426246 SYT11Q9BT88 431 aa14.02□□□□□ -0.17
USP42-203ENST00000426246 WHRNQ9P202 907 aa14.02□□□□□ -0.17
USP42-203ENST00000426246 NKX1-2Q9UD57 310 aaPredicted RBP14.02□□□□□ -0.17
USP42-203ENST00000426246 ATG7O95352 703 aa14.01□□□□□ -0.17
USP42-203ENST00000426246 MAPTP10636 758 aaKnown RBP14.01□□□□□ -0.17
USP42-203ENST00000426246 RFX1P22670 979 aa14.01□□□□□ -0.17
USP42-203ENST00000426246 GBP1P32455 592 aa14.01□□□□□ -0.17
USP42-203ENST00000426246 MAN1A1P33908 653 aa14.01□□□□□ -0.17
USP42-203ENST00000426246 PREPLQ4J6C6 727 aaPredicted RBP14.01□□□□□ -0.17
USP42-203ENST00000426246 DENND1BQ6P3S1 775 aa14.01□□□□□ -0.17
USP42-203ENST00000426246 CES3Q6UWW8 571 aa14.01□□□□□ -0.17
USP42-203ENST00000426246 SPOCD1Q6ZMY3 1216 aa14.01□□□□□ -0.17
USP42-203ENST00000426246 NLRP9Q7RTR0 991 aa14.01□□□□□ -0.17
USP42-203ENST00000426246 UNC45BQ8IWX7 931 aa14.01□□□□□ -0.17
USP42-203ENST00000426246 TMEM192Q8IY95 271 aa14.01□□□□□ -0.17
USP42-203ENST00000426246 RFWD2Q8NHY2 731 aa14.01□□□□□ -0.17
USP42-203ENST00000426246 CCDC110Q8TBZ0 833 aa14.01□□□□□ -0.17
USP42-203ENST00000426246 FAM161BQ96MY7 647 aa14.01□□□□□ -0.17
USP42-203ENST00000426246 PAFAH2Q99487 392 aa14.01□□□□□ -0.17
USP42-203ENST00000426246 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.01□□□□□ -0.17
USP42-203ENST00000426246 AKT3Q9Y243 479 aa14.01□□□□□ -0.17
USP42-203ENST00000426246 LOC100653049A0A140TA62 436 aa14.01□□□□□ -0.17
USP42-203ENST00000426246 KCNN4O15554 427 aa14.01□□□□□ -0.17
USP42-203ENST00000426246 EXTL3O43909 919 aa14.01□□□□□ -0.17
USP42-203ENST00000426246 KRT34O76011 436 aa14.01□□□□□ -0.17
USP42-203ENST00000426246 PYGBP11216 843 aa14.01□□□□□ -0.17
USP42-203ENST00000426246 GPC3P51654 580 aa14.01□□□□□ -0.17
USP42-203ENST00000426246 IFRD2Q12894 506 aaPredicted RBP14.01□□□□□ -0.17
USP42-203ENST00000426246 XRCC4Q13426 336 aa14.01□□□□□ -0.17
USP42-203ENST00000426246 NFIL3Q16649 462 aa14.01□□□□□ -0.17
USP42-203ENST00000426246 PIGWQ7Z7B1 504 aa14.01□□□□□ -0.17
USP42-203ENST00000426246 CROCCP2Q86T23 111 aa14.01□□□□□ -0.17
USP42-203ENST00000426246 ARMC2Q8NEN0 867 aa14.01□□□□□ -0.17
USP42-203ENST00000426246 TFAP2BQ92481 460 aa14.01□□□□□ -0.17
USP42-203ENST00000426246 CPB2Q96IY4 423 aa14.01□□□□□ -0.17
USP42-203ENST00000426246 PDLIM7Q9NR12 457 aa14.01□□□□□ -0.17
USP42-203ENST00000426246 SIP14410 1827 aa14.01□□□□□ -0.17
USP42-203ENST00000426246 ESRRAP11474 423 aaPredicted RBP14.01□□□□□ -0.17
USP42-203ENST00000426246 GLRA2P23416 452 aa14.01□□□□□ -0.17
USP42-203ENST00000426246 SERPINB3P29508 390 aa14.01□□□□□ -0.17
USP42-203ENST00000426246 NOMO3P69849 1222 aa14.01□□□□□ -0.17
USP42-203ENST00000426246 MGAT5Q09328 741 aa14.01□□□□□ -0.17
USP42-203ENST00000426246 STAT4Q14765 748 aa14.01□□□□□ -0.17
USP42-203ENST00000426246 STXBP2Q15833 593 aa14.01□□□□□ -0.17
USP42-203ENST00000426246 MSS51Q4VC12 460 aa14.01□□□□□ -0.17
USP42-203ENST00000426246 SLC9A9Q8IVB4 645 aa14.01□□□□□ -0.17
USP42-203ENST00000426246 PRR11Q96HE9 360 aaPredicted RBP14.01□□□□□ -0.17
USP42-203ENST00000426246 AGAP3Q96P47 875 aa14.01□□□□□ -0.17
USP42-203ENST00000426246 LPIN3Q9BQK8 851 aa14.01□□□□□ -0.17
USP42-203ENST00000426246 FAM49AQ9H0Q0 323 aaPredicted RBP14.01□□□□□ -0.17
USP42-203ENST00000426246 IP6K2Q9UHH9 426 aa14.01□□□□□ -0.17
USP42-203ENST00000426246 MCF2LO15068 1137 aa14□□□□□ -0.17
USP42-203ENST00000426246 PDGFRBP09619 1106 aa14□□□□□ -0.17
USP42-203ENST00000426246 ATP4AP20648 1035 aa14□□□□□ -0.17
USP42-203ENST00000426246 STAT5BP51692 787 aa14□□□□□ -0.17
USP42-203ENST00000426246 SNAPC2Q13487 334 aa14□□□□□ -0.17
USP42-203ENST00000426246 FNBP1LQ5T0N5 605 aa14□□□□□ -0.17
USP42-203ENST00000426246 C12orf29Q8N999 325 aa14□□□□□ -0.17
USP42-203ENST00000426246 DDX1Q92499 740 aaKnown RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms