RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 EXD1Q8NHP7 514 aa16.01■□□□□ 0.15
ACTB-204ENST00000425660 SLC2A14Q8TDB8 520 aa16.01■□□□□ 0.15
ACTB-204ENST00000425660 HSFY1Q96LI6 401 aa16.01■□□□□ 0.15
ACTB-204ENST00000425660 TMEM161AQ9NX61 479 aa16.01■□□□□ 0.15
ACTB-204ENST00000425660 DDX43Q9NXZ2 648 aaKnown RBP16.01■□□□□ 0.15
ACTB-204ENST00000425660 INPP5FQ9Y2H2 1132 aa16.01■□□□□ 0.15
ACTB-204ENST00000425660 RAD51CO43502 376 aa16.01■□□□□ 0.15
ACTB-204ENST00000425660 GABBR2O75899 941 aa16.01■□□□□ 0.15
ACTB-204ENST00000425660 GLI1P08151 1106 aa16.01■□□□□ 0.15
ACTB-204ENST00000425660 TKTP29401 623 aaKnown RBP16.01■□□□□ 0.15
ACTB-204ENST00000425660 SCNN1AP37088 669 aa16.01■□□□□ 0.15
ACTB-204ENST00000425660 CTCFP49711 727 aaPredicted RBP16.01■□□□□ 0.15
ACTB-204ENST00000425660 SLC7A5Q01650 507 aa16.01■□□□□ 0.15
ACTB-204ENST00000425660 PLCB3Q01970 1234 aa16.01■□□□□ 0.15
ACTB-204ENST00000425660 SIX1Q15475 284 aaPredicted RBP16.01■□□□□ 0.15
ACTB-204ENST00000425660 CYP1B1Q16678 543 aa16.01■□□□□ 0.15
ACTB-204ENST00000425660 FAM102AQ5T9C2 384 aaPredicted RBP16.01■□□□□ 0.15
ACTB-204ENST00000425660 KIAA0319Q5VV43 1072 aa16.01■□□□□ 0.15
ACTB-204ENST00000425660 DCLRE1AQ6PJP8 1040 aa16.01■□□□□ 0.15
ACTB-204ENST00000425660 DSTYKQ6XUX3 929 aa16.01■□□□□ 0.15
ACTB-204ENST00000425660 CCNI2Q6ZMN8 369 aaPredicted RBP16.01■□□□□ 0.15
ACTB-204ENST00000425660 FAM183BPQ6ZVS7 135 aa16.01■□□□□ 0.15
ACTB-204ENST00000425660 KLHL7Q8IXQ5 586 aa16.01■□□□□ 0.15
ACTB-204ENST00000425660 ZDHHC14Q8IZN3 488 aa16.01■□□□□ 0.15
ACTB-204ENST00000425660 DBF4BQ8NFT6 615 aa16.01■□□□□ 0.15
ACTB-204ENST00000425660 APBB2Q92870 758 aa16.01■□□□□ 0.15
ACTB-204ENST00000425660 TOX2Q96NM4 488 aa16.01■□□□□ 0.15
ACTB-204ENST00000425660 DDX47Q9H0S4 455 aaKnown RBP16.01■□□□□ 0.15
ACTB-204ENST00000425660 GDF3Q9NR23 364 aa16.01■□□□□ 0.15
ACTB-204ENST00000425660 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.01■□□□□ 0.153e-20■■■■□ 20.1
ACTB-204ENST00000425660 KANSL3Q9P2N6 904 aa16.01■□□□□ 0.15
ACTB-204ENST00000425660 C2CD4BA6NLJ0 364 aa16■□□□□ 0.15
ACTB-204ENST00000425660 BHMG1C9JSJ3 638 aaPredicted RBP16■□□□□ 0.15
ACTB-204ENST00000425660 PQBP1O60828 265 aaKnown RBP16■□□□□ 0.15
ACTB-204ENST00000425660 LRCH4O75427 683 aa16■□□□□ 0.15
ACTB-204ENST00000425660 ODC1P11926 461 aa16■□□□□ 0.15
ACTB-204ENST00000425660 PSMA2P25787 234 aa16■□□□□ 0.15
ACTB-204ENST00000425660 ZNF143P52747 638 aaPredicted RBP16■□□□□ 0.15
ACTB-204ENST00000425660 SLC39A5Q6ZMH5 540 aa16■□□□□ 0.15
ACTB-204ENST00000425660 PAQR9Q6ZVX9 377 aa16■□□□□ 0.15
ACTB-204ENST00000425660 ARCQ7LC44 396 aa16■□□□□ 0.15
ACTB-204ENST00000425660 ARFGAP1Q8N6T3 406 aa16■□□□□ 0.15
ACTB-204ENST00000425660 PRELID2Q8N945 189 aa16■□□□□ 0.15
ACTB-204ENST00000425660 PIWIL1Q96J94 861 aaKnown RBP16■□□□□ 0.15
ACTB-204ENST00000425660 ZNF333Q96JL9 665 aa16■□□□□ 0.15
ACTB-204ENST00000425660 DSEQ9UL01 958 aa16■□□□□ 0.15
ACTB-204ENST00000425660 CDH9Q9ULB4 789 aa16■□□□□ 0.15
ACTB-204ENST00000425660 USTQ9Y2C2 406 aa16■□□□□ 0.15
ACTB-204ENST00000425660 TMEM189-UBE2V1I3L0A0 370 aa15.99■□□□□ 0.15
ACTB-204ENST00000425660 ENPP3O14638 875 aa15.99■□□□□ 0.15
ACTB-204ENST00000425660 XPO1O14980 1071 aaKnown RBP15.99■□□□□ 0.15
ACTB-204ENST00000425660 PAPSS1O43252 624 aaPredicted RBP15.99■□□□□ 0.15
ACTB-204ENST00000425660 ATP8B1O43520 1251 aa15.99■□□□□ 0.15
ACTB-204ENST00000425660 ATP2C2O75185 946 aa15.99■□□□□ 0.15
ACTB-204ENST00000425660 ZMYND10O75800 440 aa15.99■□□□□ 0.15
ACTB-204ENST00000425660 PARNO95453 639 aaKnown RBP15.99■□□□□ 0.15
ACTB-204ENST00000425660 TCF4P15884 667 aa15.99■□□□□ 0.15
ACTB-204ENST00000425660 ADORA2BP29275 332 aa15.99■□□□□ 0.15
ACTB-204ENST00000425660 ACADSBP45954 432 aa15.99■□□□□ 0.15
ACTB-204ENST00000425660 RGS7P49802 495 aa15.99■□□□□ 0.15
ACTB-204ENST00000425660 SLC6A3Q01959 620 aa15.99■□□□□ 0.15
ACTB-204ENST00000425660 SLC25A11Q02978 314 aaKnown RBP15.99■□□□□ 0.15
ACTB-204ENST00000425660 NOMO2Q5JPE7 1267 aa15.99■□□□□ 0.15
ACTB-204ENST00000425660 MAATS1Q7Z4T9 603 aa15.99■□□□□ 0.15
ACTB-204ENST00000425660 CRIPAKQ8N1N5 446 aa15.99■□□□□ 0.15
ACTB-204ENST00000425660 EMC1Q8N766 993 aa15.99■□□□□ 0.15
ACTB-204ENST00000425660 C12orf50Q8NA57 414 aaPredicted RBP15.99■□□□□ 0.15
ACTB-204ENST00000425660 KHSRPQ92945 711 aaKnown RBP eCLIP15.99■□□□□ 0.15
ACTB-204ENST00000425660 DUSP16Q9BY84 665 aa15.99■□□□□ 0.15
ACTB-204ENST00000425660 CRTAC1Q9NQ79 661 aa15.99■□□□□ 0.15
ACTB-204ENST00000425660 MTUS1Q9ULD2 1270 aa15.99■□□□□ 0.15
ACTB-204ENST00000425660 TDRD15B5MCY1 1934 aaKnown RBP15.99■□□□□ 0.15
ACTB-204ENST00000425660 PHF2O75151 1096 aa15.98■□□□□ 0.15
ACTB-204ENST00000425660 HEXIM1O94992 359 aaKnown RBP15.98■□□□□ 0.15
ACTB-204ENST00000425660 CXCL10P02778 98 aa15.98■□□□□ 0.15
ACTB-204ENST00000425660 NPR3P17342 541 aa15.98■□□□□ 0.15
ACTB-204ENST00000425660 ACAT1P24752 427 aaKnown RBP15.98■□□□□ 0.15
ACTB-204ENST00000425660 PCSK1P29120 753 aa15.98■□□□□ 0.15
ACTB-204ENST00000425660 CHRNA3P32297 505 aa15.98■□□□□ 0.15
ACTB-204ENST00000425660 MRPS25P82663 173 aaKnown RBP15.98■□□□□ 0.15
ACTB-204ENST00000425660 KLF1Q13351 362 aaPredicted RBP15.98■□□□□ 0.15
ACTB-204ENST00000425660 MAP9Q49MG5 647 aa15.98■□□□□ 0.15
ACTB-204ENST00000425660 OR6B2Q6IFH4 312 aa15.98■□□□□ 0.15
ACTB-204ENST00000425660 SCUBE3Q8IX30 993 aa15.98■□□□□ 0.15
ACTB-204ENST00000425660 EIF1ADQ8N9N8 165 aaKnown RBP15.98■□□□□ 0.15
ACTB-204ENST00000425660 CCDC26Q8TAB7 109 aa15.98■□□□□ 0.15
ACTB-204ENST00000425660 URGCPQ8TCY9 931 aa15.98■□□□□ 0.15
ACTB-204ENST00000425660 RSPH1Q8WYR4 309 aa15.98■□□□□ 0.15
ACTB-204ENST00000425660 SEC14L1Q92503 715 aa15.98■□□□□ 0.15
ACTB-204ENST00000425660 SEPT8Q92599 483 aa15.98■□□□□ 0.15
ACTB-204ENST00000425660 SUSD3Q96L08 255 aa15.98■□□□□ 0.15
ACTB-204ENST00000425660 RTP3Q9BQQ7 232 aa15.98■□□□□ 0.15
ACTB-204ENST00000425660 SYT15Q9BQS2 421 aa15.98■□□□□ 0.15
ACTB-204ENST00000425660 ACBD6Q9BR61 282 aa15.98■□□□□ 0.15
ACTB-204ENST00000425660 AMACRQ9UHK6 382 aa15.98■□□□□ 0.15
ACTB-204ENST00000425660 TCRBV7S2A1N4TA0A589 114 aa15.98■□□□□ 0.15
ACTB-204ENST00000425660 ARHGEF37A1IGU5 675 aa15.98■□□□□ 0.15
ACTB-204ENST00000425660 DPYSL4O14531 572 aa15.98■□□□□ 0.15
ACTB-204ENST00000425660 B4GALT3O60512 393 aa15.98■□□□□ 0.15
ACTB-204ENST00000425660 DDHD2O94830 711 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms