RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 RPN1P04843 607 aaKnown RBP13.64□□□□□ -0.23
SGCE-203ENST00000425444 HOXC13P31276 330 aa13.64□□□□□ -0.23
SGCE-203ENST00000425444 CCR2P41597 374 aa13.64□□□□□ -0.23
SGCE-203ENST00000425444 RAP1GAPP47736 663 aa13.64□□□□□ -0.23
SGCE-203ENST00000425444 TUFMP49411 452 aaKnown RBP13.64□□□□□ -0.23
SGCE-203ENST00000425444 CDR1P51861 262 aa13.64□□□□□ -0.23
SGCE-203ENST00000425444 MYL7Q01449 175 aa13.64□□□□□ -0.23
SGCE-203ENST00000425444 STK4Q13043 487 aa13.64□□□□□ -0.23
SGCE-203ENST00000425444 PSMD2Q13200 908 aa13.64□□□□□ -0.23
SGCE-203ENST00000425444 VEPH1Q14D04 833 aa13.64□□□□□ -0.23
SGCE-203ENST00000425444 FAM78AQ5JUQ0 283 aa13.64□□□□□ -0.23
SGCE-203ENST00000425444 PRSS36Q5K4E3 855 aa13.64□□□□□ -0.23
SGCE-203ENST00000425444 PLA2G2CQ5R387 149 aa13.64□□□□□ -0.23
SGCE-203ENST00000425444 SH3PXD2AQ5TCZ1 1133 aa13.64□□□□□ -0.23
SGCE-203ENST00000425444 TCEAL6Q6IPX3 200 aa13.64□□□□□ -0.23
SGCE-203ENST00000425444 Q6ZS52 159 aa13.64□□□□□ -0.23
SGCE-203ENST00000425444 KBTBD6Q86V97 674 aa13.64□□□□□ -0.23
SGCE-203ENST00000425444 TMEM86AQ8N2M4 240 aa13.64□□□□□ -0.23
SGCE-203ENST00000425444 PDCL2Q8N4E4 241 aa13.64□□□□□ -0.23
SGCE-203ENST00000425444 KIAA0895Q8NCT3 520 aa13.64□□□□□ -0.23
SGCE-203ENST00000425444 SPPL2BQ8TCT7 592 aa13.64□□□□□ -0.23
SGCE-203ENST00000425444 C2orf15Q8WU43 125 aaKnown RBP13.64□□□□□ -0.23
SGCE-203ENST00000425444 TCEAL3Q969E4 200 aa13.64□□□□□ -0.23
SGCE-203ENST00000425444 CCDC127Q96BQ5 260 aa13.64□□□□□ -0.23
SGCE-203ENST00000425444 CCDC34Q96HJ3 373 aa13.64□□□□□ -0.23
SGCE-203ENST00000425444 CGRRF1Q99675 332 aa13.64□□□□□ -0.23
SGCE-203ENST00000425444 C2orf42Q9NWW7 574 aa13.64□□□□□ -0.23
SGCE-203ENST00000425444 DDX43Q9NXZ2 648 aaKnown RBP13.64□□□□□ -0.23
SGCE-203ENST00000425444 SIX4Q9UIU6 781 aa13.64□□□□□ -0.23
SGCE-203ENST00000425444 L1RE1Q9UN81 338 aa13.64□□□□□ -0.23
SGCE-203ENST00000425444 A0A1W2PQ27 194 aa13.63□□□□□ -0.23
SGCE-203ENST00000425444 A0A1W2PQ64 194 aa13.63□□□□□ -0.23
SGCE-203ENST00000425444 A0A1W2PQD8 194 aa13.63□□□□□ -0.23
SGCE-203ENST00000425444 GOLGA6L4A6NEF3 574 aa13.63□□□□□ -0.23
SGCE-203ENST00000425444 RPP40O75818 363 aaKnown RBP13.63□□□□□ -0.23
SGCE-203ENST00000425444 MICAL2O94851 1124 aa13.63□□□□□ -0.23
SGCE-203ENST00000425444 GJA1P17302 382 aa13.63□□□□□ -0.23
SGCE-203ENST00000425444 PSMC3P17980 439 aa13.63□□□□□ -0.23
SGCE-203ENST00000425444 MPLP40238 635 aa13.63□□□□□ -0.23
SGCE-203ENST00000425444 NUCB2P80303 420 aa13.63□□□□□ -0.23
SGCE-203ENST00000425444 CYP24A1Q07973 514 aa13.63□□□□□ -0.23
SGCE-203ENST00000425444 SMARCB1Q12824 385 aa13.63□□□□□ -0.23
SGCE-203ENST00000425444 PSMD6Q15008 389 aa13.63□□□□□ -0.23
SGCE-203ENST00000425444 TAF12Q16514 161 aa13.63□□□□□ -0.23
SGCE-203ENST00000425444 DAB2IPQ5VWQ8 1189 aa13.63□□□□□ -0.23
SGCE-203ENST00000425444 ITIH5Q86UX2 942 aa13.63□□□□□ -0.23
SGCE-203ENST00000425444 ADGRF2Q8IZF7 708 aa13.63□□□□□ -0.23
SGCE-203ENST00000425444 TTC9BQ8N6N2 239 aa13.63□□□□□ -0.23
SGCE-203ENST00000425444 TOP6BLQ8N6T0 577 aa13.63□□□□□ -0.23
SGCE-203ENST00000425444 GAB3Q8WWW8 586 aa13.63□□□□□ -0.23
SGCE-203ENST00000425444 HPDLQ96IR7 371 aa13.63□□□□□ -0.23
SGCE-203ENST00000425444 EDEM2Q9BV94 578 aa13.63□□□□□ -0.23
SGCE-203ENST00000425444 TRPV5Q9NQA5 729 aa13.63□□□□□ -0.23
SGCE-203ENST00000425444 VPS45Q9NRW7 570 aa13.63□□□□□ -0.23
SGCE-203ENST00000425444 HSFX1Q9UBD0 423 aa13.63□□□□□ -0.23
SGCE-203ENST00000425444 ASB3Q9Y575 518 aa13.63□□□□□ -0.23
SGCE-203ENST00000425444 PCDHB5Q9Y5E4 795 aa13.63□□□□□ -0.23
SGCE-203ENST00000425444 PCDHGA5Q9Y5G8 931 aa13.63□□□□□ -0.23
SGCE-203ENST00000425444 TENM4Q6N022 2769 aa13.62□□□□□ -0.23
SGCE-203ENST00000425444 APC2O95996 2303 aa13.62□□□□□ -0.23
SGCE-203ENST00000425444 ASCC3Q8N3C0 2202 aaKnown RBP13.62□□□□□ -0.23
SGCE-203ENST00000425444 FAM237AA0A1B0GTK4 181 aa13.62□□□□□ -0.23
SGCE-203ENST00000425444 A0A1W2PRU2 124 aa13.62□□□□□ -0.23
SGCE-203ENST00000425444 PCNX2A6NKB5 2137 aa13.62□□□□□ -0.23
SGCE-203ENST00000425444 NRG2O14511 850 aaPredicted RBP13.62□□□□□ -0.23
SGCE-203ENST00000425444 ZNF263O14978 683 aa13.62□□□□□ -0.23
SGCE-203ENST00000425444 KIF20AO95235 890 aa13.62□□□□□ -0.23
SGCE-203ENST00000425444 PRR29P0C7W0 189 aa13.62□□□□□ -0.23
SGCE-203ENST00000425444 CCDC192P0DO97 292 aa13.62□□□□□ -0.23
SGCE-203ENST00000425444 ACAT1P24752 427 aaKnown RBP13.62□□□□□ -0.23
SGCE-203ENST00000425444 HOXA6P31267 233 aa13.62□□□□□ -0.23
SGCE-203ENST00000425444 PXNP49023 591 aaPredicted RBP13.62□□□□□ -0.23
SGCE-203ENST00000425444 EPHA5P54756 1037 aa13.62□□□□□ -0.23
SGCE-203ENST00000425444 TEAD2Q15562 447 aa13.62□□□□□ -0.23
SGCE-203ENST00000425444 NFE2Q16621 373 aaPredicted RBP13.62□□□□□ -0.23
SGCE-203ENST00000425444 SOWAHCQ53LP3 525 aaPredicted RBP13.62□□□□□ -0.23
SGCE-203ENST00000425444 SCARA3Q6AZY7 606 aa13.62□□□□□ -0.23
SGCE-203ENST00000425444 VITQ6UXI7 678 aa13.62□□□□□ -0.23
SGCE-203ENST00000425444 KRBA2Q6ZNG9 492 aa13.62□□□□□ -0.23
SGCE-203ENST00000425444 TRAPPC11Q7Z392 1133 aa13.62□□□□□ -0.23
SGCE-203ENST00000425444 TMC8Q8IU68 726 aa13.62□□□□□ -0.23
SGCE-203ENST00000425444 C12orf56Q8IXR9 622 aa13.62□□□□□ -0.23
SGCE-203ENST00000425444 CXorf38Q8TB03 319 aa13.62□□□□□ -0.23
SGCE-203ENST00000425444 PSMG2Q969U7 264 aa13.62□□□□□ -0.23
SGCE-203ENST00000425444 ASB16Q96NS5 453 aa13.62□□□□□ -0.23
SGCE-203ENST00000425444 GCNAQ96QF7 691 aa13.62□□□□□ -0.23
SGCE-203ENST00000425444 DNAJC25Q9H1X3 360 aa13.62□□□□□ -0.23
SGCE-203ENST00000425444 GOLPH3LQ9H4A5 285 aa13.62□□□□□ -0.23
SGCE-203ENST00000425444 GDAP2Q9NXN4 497 aa13.62□□□□□ -0.23
SGCE-203ENST00000425444 COL4A2P08572 1712 aa13.61□□□□□ -0.23
SGCE-203ENST00000425444 ADAMTS20P59510 1910 aa13.61□□□□□ -0.23
SGCE-203ENST00000425444 FGF19O95750 216 aa13.61□□□□□ -0.23
SGCE-203ENST00000425444 PCSK1P29120 753 aa13.61□□□□□ -0.23
SGCE-203ENST00000425444 LHX1P48742 406 aa13.61□□□□□ -0.23
SGCE-203ENST00000425444 TRPC3Q13507 836 aa13.61□□□□□ -0.23
SGCE-203ENST00000425444 ARHGAP15Q53QZ3 475 aa13.61□□□□□ -0.23
SGCE-203ENST00000425444 INTS6LQ5JSJ4 861 aaKnown RBP13.61□□□□□ -0.23
SGCE-203ENST00000425444 KIAA1211LQ6NV74 962 aa13.61□□□□□ -0.23
SGCE-203ENST00000425444 DNAJB7Q7Z6W7 309 aaPredicted RBP13.61□□□□□ -0.23
SGCE-203ENST00000425444 LRRTM3Q86VH5 581 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms