RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 MSH2P43246 934 aa13.64□□□□□ -0.23
COL12A1-205ENST00000425443 MAGEA4P43358 317 aa13.64□□□□□ -0.23
COL12A1-205ENST00000425443 ARSEP51690 589 aa13.64□□□□□ -0.23
COL12A1-205ENST00000425443 CAV1Q03135 178 aa13.64□□□□□ -0.23
COL12A1-205ENST00000425443 TARBP2Q15633 366 aaKnown RBP13.64□□□□□ -0.23
COL12A1-205ENST00000425443 PKN2Q16513 984 aaKnown RBP13.64□□□□□ -0.23
COL12A1-205ENST00000425443 PLEKHA7Q6IQ23 1121 aa13.64□□□□□ -0.23
COL12A1-205ENST00000425443 GPAT2Q6NUI2 795 aa13.64□□□□□ -0.23
COL12A1-205ENST00000425443 TRAPPC12Q8WVT3 735 aa13.64□□□□□ -0.23
COL12A1-205ENST00000425443 ANKRD36BP1Q96IX9 119 aa13.64□□□□□ -0.23
COL12A1-205ENST00000425443 PPP1R16BQ96T49 567 aa13.64□□□□□ -0.23
COL12A1-205ENST00000425443 LBHD1Q9BQE6 289 aaPredicted RBP13.64□□□□□ -0.23
COL12A1-205ENST00000425443 TMEM121Q9BTD3 319 aa13.64□□□□□ -0.23
COL12A1-205ENST00000425443 NIF3L1Q9GZT8 377 aa13.64□□□□□ -0.23
COL12A1-205ENST00000425443 ZWILCHQ9H900 591 aa13.64□□□□□ -0.23
COL12A1-205ENST00000425443 WDR91A4D1P6 747 aa13.64□□□□□ -0.23
COL12A1-205ENST00000425443 ASS1P00966 412 aaKnown RBP13.64□□□□□ -0.23
COL12A1-205ENST00000425443 ATP5DP30049 168 aa13.64□□□□□ -0.23
COL12A1-205ENST00000425443 IREB2P48200 963 aaKnown RBP13.64□□□□□ -0.23
COL12A1-205ENST00000425443 ZNF252P-AS1Q0IIN9 211 aa13.64□□□□□ -0.23
COL12A1-205ENST00000425443 NFX1Q12986 1120 aaKnown RBP13.64□□□□□ -0.23
COL12A1-205ENST00000425443 CCNG2Q16589 344 aa13.64□□□□□ -0.23
COL12A1-205ENST00000425443 MFSD7Q6UXD7 560 aa13.64□□□□□ -0.23
COL12A1-205ENST00000425443 KATNAL2Q8IYT4 538 aa13.64□□□□□ -0.23
COL12A1-205ENST00000425443 BBOF1Q8ND07 529 aa13.64□□□□□ -0.23
COL12A1-205ENST00000425443 EXD1Q8NHP7 514 aa13.64□□□□□ -0.23
COL12A1-205ENST00000425443 RBM41Q96IZ5 413 aaKnown RBP13.64□□□□□ -0.23
COL12A1-205ENST00000425443 CCDC77Q9BR77 488 aa13.64□□□□□ -0.23
COL12A1-205ENST00000425443 NKX1-2Q9UD57 310 aaPredicted RBP13.64□□□□□ -0.23
COL12A1-205ENST00000425443 ADGRA2Q96PE1 1338 aa13.64□□□□□ -0.23
COL12A1-205ENST00000425443 A0A1W2PPM1 405 aa13.63□□□□□ -0.23
COL12A1-205ENST00000425443 ADM5C9JUS6 153 aa13.63□□□□□ -0.23
COL12A1-205ENST00000425443 SGK1O00141 431 aa13.63□□□□□ -0.23
COL12A1-205ENST00000425443 MSCO60682 206 aa13.63□□□□□ -0.23
COL12A1-205ENST00000425443 CDH16O75309 829 aa13.63□□□□□ -0.23
COL12A1-205ENST00000425443 ASMTLO95671 621 aa13.63□□□□□ -0.23
COL12A1-205ENST00000425443 GJB1P08034 283 aa13.63□□□□□ -0.23
COL12A1-205ENST00000425443 PTP4A2Q12974 167 aa13.63□□□□□ -0.23
COL12A1-205ENST00000425443 SURF1Q15526 300 aa13.63□□□□□ -0.23
COL12A1-205ENST00000425443 APBB1IPQ7Z5R6 666 aaPredicted RBP13.63□□□□□ -0.23
COL12A1-205ENST00000425443 ZBED8Q8IZ13 594 aa13.63□□□□□ -0.23
COL12A1-205ENST00000425443 NLGN2Q8NFZ4 835 aa13.63□□□□□ -0.23
COL12A1-205ENST00000425443 ACO2Q99798 780 aaKnown RBP13.63□□□□□ -0.23
COL12A1-205ENST00000425443 C12orf65Q9H3J6 166 aaKnown RBP13.63□□□□□ -0.23
COL12A1-205ENST00000425443 AGTPBP1Q9UPW5 1226 aa13.63□□□□□ -0.23
COL12A1-205ENST00000425443 CHKBQ9Y259 395 aa13.63□□□□□ -0.23
COL12A1-205ENST00000425443 POLR2AP24928 1970 aaKnown RBP13.63□□□□□ -0.23
COL12A1-205ENST00000425443 PIK3R2O00459 728 aa13.63□□□□□ -0.23
COL12A1-205ENST00000425443 DDNO94850 711 aaPredicted RBP13.63□□□□□ -0.23
COL12A1-205ENST00000425443 TJP3O95049 919 aa13.63□□□□□ -0.23
COL12A1-205ENST00000425443 CCNB1P14635 433 aa13.63□□□□□ -0.23
COL12A1-205ENST00000425443 MMP8P22894 467 aa13.63□□□□□ -0.23
COL12A1-205ENST00000425443 RPA3P35244 121 aaPredicted RBP13.63□□□□□ -0.23
COL12A1-205ENST00000425443 LMNB2Q03252 620 aa13.63□□□□□ -0.23
COL12A1-205ENST00000425443 TFDP1Q14186 410 aa13.63□□□□□ -0.23
COL12A1-205ENST00000425443 PITPNM3Q9BZ71 974 aa13.63□□□□□ -0.23
COL12A1-205ENST00000425443 ASCC2Q9H1I8 757 aaPredicted RBP13.63□□□□□ -0.23
COL12A1-205ENST00000425443 C2orf40Q9H1Z8 148 aa13.63□□□□□ -0.23
COL12A1-205ENST00000425443 GOLGA8RI6L899 631 aa13.62□□□□□ -0.23
COL12A1-205ENST00000425443 ARIH2O95376 493 aa13.62□□□□□ -0.23
COL12A1-205ENST00000425443 NAT2P11245 290 aa13.62□□□□□ -0.23
COL12A1-205ENST00000425443 TARSP26639 723 aaKnown RBP13.62□□□□□ -0.23
COL12A1-205ENST00000425443 NRLP54845 237 aa13.62□□□□□ -0.23
COL12A1-205ENST00000425443 EFTUD2Q15029 972 aaKnown RBP eCLIP13.62□□□□□ -0.23
COL12A1-205ENST00000425443 SLC1A5Q15758 541 aa13.62□□□□□ -0.23
COL12A1-205ENST00000425443 ATF7IP2Q5U623 682 aa13.62□□□□□ -0.23
COL12A1-205ENST00000425443 TRABD2AQ86V40 505 aa13.62□□□□□ -0.23
COL12A1-205ENST00000425443 FBXO16Q8IX29 292 aaPredicted RBP13.62□□□□□ -0.23
COL12A1-205ENST00000425443 RCOR2Q8IZ40 523 aa13.62□□□□□ -0.23
COL12A1-205ENST00000425443 DENND1AQ8TEH3 1009 aa13.62□□□□□ -0.23
COL12A1-205ENST00000425443 KLF6Q99612 283 aaPredicted RBP13.62□□□□□ -0.23
COL12A1-205ENST00000425443 GM2AP17900 193 aa13.62□□□□□ -0.23
COL12A1-205ENST00000425443 OGDHQ02218 1023 aa13.62□□□□□ -0.23
COL12A1-205ENST00000425443 ETNK1Q9HBU6 452 aa13.62□□□□□ -0.23
COL12A1-205ENST00000425443 ALG13Q9NP73 1137 aaKnown RBP13.62□□□□□ -0.23
COL12A1-205ENST00000425443 TJP2Q9UDY2 1190 aa13.62□□□□□ -0.23
COL12A1-205ENST00000425443 LIASO43766 372 aa13.62□□□□□ -0.23
COL12A1-205ENST00000425443 CSDE1O75534 798 aaKnown RBP13.62□□□□□ -0.23
COL12A1-205ENST00000425443 TXNP10599 105 aaKnown RBP13.62□□□□□ -0.23
COL12A1-205ENST00000425443 CLCN3P51790 818 aa13.62□□□□□ -0.23
COL12A1-205ENST00000425443 WDR72Q3MJ13 1102 aa13.62□□□□□ -0.23
COL12A1-205ENST00000425443 RNF43Q68DV7 783 aa13.62□□□□□ -0.23
COL12A1-205ENST00000425443 EFCAB12Q6NXP0 572 aa13.62□□□□□ -0.23
COL12A1-205ENST00000425443 ARHGEF18Q6ZSZ5 1173 aa13.62□□□□□ -0.23
COL12A1-205ENST00000425443 ZCCHC9Q8N567 271 aaKnown RBP13.62□□□□□ -0.23
COL12A1-205ENST00000425443 ERP27Q96DN0 273 aa13.62□□□□□ -0.23
COL12A1-205ENST00000425443 GPR20Q99678 358 aa13.62□□□□□ -0.23
COL12A1-205ENST00000425443 EPAS1Q99814 870 aa13.62□□□□□ -0.23
COL12A1-205ENST00000425443 SLX1AQ9BQ83 275 aa13.62□□□□□ -0.23
COL12A1-205ENST00000425443 TRIM4Q9C037 500 aa13.62□□□□□ -0.23
COL12A1-205ENST00000425443 RPF1Q9H9Y2 349 aaKnown RBP13.62□□□□□ -0.23
COL12A1-205ENST00000425443 HAO1Q9UJM8 370 aa13.62□□□□□ -0.23
COL12A1-205ENST00000425443 PHTF1Q9UMS5 762 aa13.62□□□□□ -0.23
COL12A1-205ENST00000425443 FAM47DPA6NHR8 397 aa13.61□□□□□ -0.23
COL12A1-205ENST00000425443 UNC5CO95185 931 aa13.61□□□□□ -0.23
COL12A1-205ENST00000425443 POLR2BP30876 1174 aaKnown RBP13.61□□□□□ -0.23
COL12A1-205ENST00000425443 YWHAEP62258 255 aaKnown RBP13.61□□□□□ -0.23
COL12A1-205ENST00000425443 MPP3Q13368 585 aa13.61□□□□□ -0.23
COL12A1-205ENST00000425443 MPZL3Q6UWV2 235 aa13.61□□□□□ -0.23
COL12A1-205ENST00000425443 COPS5Q92905 334 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms