RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 A0A1W2PQD8 194 aa13.9□□□□□ -0.18
VRK3-203ENST00000424804 PRR5-ARHGAP8B1AHC4 643 aa13.9□□□□□ -0.18
VRK3-203ENST00000424804 TGFB1I1O43294 461 aa13.9□□□□□ -0.18
VRK3-203ENST00000424804 PRR29P0C7W0 189 aa13.9□□□□□ -0.18
VRK3-203ENST00000424804 CSH1P0DML2 217 aa13.9□□□□□ -0.18
VRK3-203ENST00000424804 CSH2P0DML3 217 aa13.9□□□□□ -0.18
VRK3-203ENST00000424804 ARHGAP8P85298 464 aa13.9□□□□□ -0.18
VRK3-203ENST00000424804 ZXDBP98169 803 aa13.9□□□□□ -0.18
VRK3-203ENST00000424804 TSPY1Q01534 308 aa13.9□□□□□ -0.18
VRK3-203ENST00000424804 BFSP1Q12934 665 aa13.9□□□□□ -0.18
VRK3-203ENST00000424804 SIM2Q14190 667 aaPredicted RBP13.9□□□□□ -0.18
VRK3-203ENST00000424804 NFE2Q16621 373 aaPredicted RBP13.9□□□□□ -0.18
VRK3-203ENST00000424804 CFAP221Q4G0U5 840 aa13.9□□□□□ -0.18
VRK3-203ENST00000424804 CBWD2Q8IUF1 395 aa13.9□□□□□ -0.18
VRK3-203ENST00000424804 GPD1LQ8N335 351 aa13.9□□□□□ -0.18
VRK3-203ENST00000424804 TOP6BLQ8N6T0 577 aa13.9□□□□□ -0.18
VRK3-203ENST00000424804 SPATA18Q8TC71 538 aa13.9□□□□□ -0.18
VRK3-203ENST00000424804 CACTINQ8WUQ7 758 aaKnown RBP13.9□□□□□ -0.18
VRK3-203ENST00000424804 CCDC47Q96A33 483 aaKnown RBP13.9□□□□□ -0.18
VRK3-203ENST00000424804 EBF3Q9H4W6 596 aa13.9□□□□□ -0.18
VRK3-203ENST00000424804 CRTAC1Q9NQ79 661 aa13.9□□□□□ -0.18
VRK3-203ENST00000424804 ZMYM5Q9UJ78 669 aa13.9□□□□□ -0.18
VRK3-203ENST00000424804 SNX9Q9Y5X1 595 aa13.9□□□□□ -0.18
VRK3-203ENST00000424804 EPG5Q9HCE0 2579 aa13.9□□□□□ -0.18
VRK3-203ENST00000424804 ACACBO00763 2458 aa13.89□□□□□ -0.19
VRK3-203ENST00000424804 PVALEFA0A1B0GWK0 134 aa13.89□□□□□ -0.19
VRK3-203ENST00000424804 DCDC2BA2VCK2 349 aa13.89□□□□□ -0.19
VRK3-203ENST00000424804 CLIC2O15247 247 aa13.89□□□□□ -0.19
VRK3-203ENST00000424804 EIF3DO15371 548 aaKnown RBP eCLIP13.89□□□□□ -0.19
VRK3-203ENST00000424804 HUS1O60921 280 aa13.89□□□□□ -0.19
VRK3-203ENST00000424804 ZNF202O95125 648 aa13.89□□□□□ -0.19
VRK3-203ENST00000424804 CST3P01034 146 aaPredicted RBP13.89□□□□□ -0.19
VRK3-203ENST00000424804 EGFP01133 1207 aa13.89□□□□□ -0.19
VRK3-203ENST00000424804 CNR2P34972 360 aa13.89□□□□□ -0.19
VRK3-203ENST00000424804 GALK1P51570 392 aa13.89□□□□□ -0.19
VRK3-203ENST00000424804 CYP2J2P51589 502 aa13.89□□□□□ -0.19
VRK3-203ENST00000424804 RBP5P82980 135 aa13.89□□□□□ -0.19
VRK3-203ENST00000424804 LMNB2Q03252 620 aa13.89□□□□□ -0.19
VRK3-203ENST00000424804 EHHADHQ08426 723 aa13.89□□□□□ -0.19
VRK3-203ENST00000424804 PPP2R5DQ14738 602 aa13.89□□□□□ -0.19
VRK3-203ENST00000424804 ZNF77Q15935 545 aa13.89□□□□□ -0.19
VRK3-203ENST00000424804 KMT5BQ4FZB7 885 aa13.89□□□□□ -0.19
VRK3-203ENST00000424804 HEATR6Q6AI08 1181 aaKnown RBP13.89□□□□□ -0.19
VRK3-203ENST00000424804 CNNM4Q6P4Q7 775 aa13.89□□□□□ -0.19
VRK3-203ENST00000424804 KRBA2Q6ZNG9 492 aa13.89□□□□□ -0.19
VRK3-203ENST00000424804 DPH6Q7L8W6 267 aa13.89□□□□□ -0.19
VRK3-203ENST00000424804 ZNF507Q8TCN5 953 aa13.89□□□□□ -0.19
VRK3-203ENST00000424804 SECISBP2LQ93073 1101 aaKnown RBP13.89□□□□□ -0.19
VRK3-203ENST00000424804 THG1LQ9NWX6 298 aaKnown RBP13.89□□□□□ -0.19
VRK3-203ENST00000424804 GMEB2Q9UKD1 530 aa13.89□□□□□ -0.19
VRK3-203ENST00000424804 USP18Q9UMW8 372 aa13.89□□□□□ -0.19
VRK3-203ENST00000424804 MAGED2Q9UNF1 606 aaPredicted RBP13.89□□□□□ -0.19
VRK3-203ENST00000424804 HELZP42694 1942 aaKnown RBP13.89□□□□□ -0.19
VRK3-203ENST00000424804 KMT2BQ9UMN6 2715 aaPredicted RBP13.88□□□□□ -0.19
VRK3-203ENST00000424804 MYOFQ9NZM1 2061 aa13.88□□□□□ -0.19
VRK3-203ENST00000424804 ANTXRLA6NF34 631 aa13.88□□□□□ -0.19
VRK3-203ENST00000424804 KLRC4O43908 158 aa13.88□□□□□ -0.19
VRK3-203ENST00000424804 GDF9O60383 454 aa13.88□□□□□ -0.19
VRK3-203ENST00000424804 LRP3O75074 770 aa13.88□□□□□ -0.19
VRK3-203ENST00000424804 RPN1P04843 607 aaKnown RBP13.88□□□□□ -0.19
VRK3-203ENST00000424804 AVPR1AP37288 418 aa13.88□□□□□ -0.19
VRK3-203ENST00000424804 MAGEA11P43364 429 aa13.88□□□□□ -0.19
VRK3-203ENST00000424804 LHX1P48742 406 aa13.88□□□□□ -0.19
VRK3-203ENST00000424804 PXNP49023 591 aaPredicted RBP13.88□□□□□ -0.19
VRK3-203ENST00000424804 USP46P62068 366 aa13.88□□□□□ -0.19
VRK3-203ENST00000424804 MYL7Q01449 175 aa13.88□□□□□ -0.19
VRK3-203ENST00000424804 USP4Q13107 963 aa13.88□□□□□ -0.19
VRK3-203ENST00000424804 TAF12Q16514 161 aa13.88□□□□□ -0.19
VRK3-203ENST00000424804 PRR23BQ6ZRT6 265 aa13.88□□□□□ -0.19
VRK3-203ENST00000424804 HS2ST1Q7LGA3 356 aa13.88□□□□□ -0.19
VRK3-203ENST00000424804 ADGRF2Q8IZF7 708 aa13.88□□□□□ -0.19
VRK3-203ENST00000424804 FAM160A2Q8N612 972 aaPredicted RBP13.88□□□□□ -0.19
VRK3-203ENST00000424804 RDH13Q8NBN7 331 aa13.88□□□□□ -0.19
VRK3-203ENST00000424804 SCFD1Q8WVM8 642 aa13.88□□□□□ -0.19
VRK3-203ENST00000424804 ZNF516Q92618 1163 aa13.88□□□□□ -0.19
VRK3-203ENST00000424804 CCDC34Q96HJ3 373 aa13.88□□□□□ -0.19
VRK3-203ENST00000424804 FUBP3Q96I24 572 aaKnown RBP eCLIP13.88□□□□□ -0.19
VRK3-203ENST00000424804 GCNAQ96QF7 691 aa13.88□□□□□ -0.19
VRK3-203ENST00000424804 KIF9Q9HAQ2 790 aa13.88□□□□□ -0.19
VRK3-203ENST00000424804 SEMA4GQ9NTN9 838 aa13.88□□□□□ -0.19
VRK3-203ENST00000424804 TMEM30AQ9NV96 361 aa13.88□□□□□ -0.19
VRK3-203ENST00000424804 HSPBP1Q9NZL4 362 aa13.88□□□□□ -0.19
VRK3-203ENST00000424804 UBE4BO95155 1302 aa13.88□□□□□ -0.19
VRK3-203ENST00000424804 LAMA1P25391 3075 aa13.87□□□□□ -0.19
VRK3-203ENST00000424804 C2orf78A6NCI8 922 aa13.87□□□□□ -0.19
VRK3-203ENST00000424804 KRT19P08727 400 aa13.87□□□□□ -0.19
VRK3-203ENST00000424804 TCF3P15923 654 aa13.87□□□□□ -0.19
VRK3-203ENST00000424804 WARSP23381 471 aaKnown RBP13.87□□□□□ -0.19
VRK3-203ENST00000424804 GJA4P35212 333 aa13.87□□□□□ -0.19
VRK3-203ENST00000424804 RAP1GAPP47736 663 aa13.87□□□□□ -0.19
VRK3-203ENST00000424804 RPL10AP62906 217 aaKnown RBP13.87□□□□□ -0.19
VRK3-203ENST00000424804 FAM160A1Q05DH4 1040 aa13.87□□□□□ -0.19
VRK3-203ENST00000424804 STK4Q13043 487 aa13.87□□□□□ -0.19
VRK3-203ENST00000424804 CSRP2Q16527 193 aa13.87□□□□□ -0.19
VRK3-203ENST00000424804 GAB4Q2WGN9 574 aa13.87□□□□□ -0.19
VRK3-203ENST00000424804 EML3Q32P44 896 aa13.87□□□□□ -0.19
VRK3-203ENST00000424804 MRPS31Q92665 395 aaKnown RBP13.87□□□□□ -0.19
VRK3-203ENST00000424804 HPDLQ96IR7 371 aa13.87□□□□□ -0.19
VRK3-203ENST00000424804 SPATA17Q96L03 361 aa13.87□□□□□ -0.19
VRK3-203ENST00000424804 RTKNQ9BST9 563 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms