RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 PCED1BQ96HM7 432 aa11.66□□□□□ -0.54
USP49-204ENST00000423567 CEP295NLQ96MC4 621 aa11.66□□□□□ -0.54
USP49-204ENST00000423567 ASB16Q96NS5 453 aa11.66□□□□□ -0.54
USP49-204ENST00000423567 MED10Q9BTT4 135 aa11.66□□□□□ -0.54
USP49-204ENST00000423567 LRRC3Q9BY71 257 aa11.66□□□□□ -0.54
USP49-204ENST00000423567 ELOVL4Q9GZR5 314 aa11.66□□□□□ -0.54
USP49-204ENST00000423567 NIF3L1Q9GZT8 377 aa11.66□□□□□ -0.54
USP49-204ENST00000423567 CLSTN2Q9H4D0 955 aa11.66□□□□□ -0.54
USP49-204ENST00000423567 CYP3A43Q9HB55 503 aa11.66□□□□□ -0.54
USP49-204ENST00000423567 ZNF334Q9HCZ1 680 aaPredicted RBP11.66□□□□□ -0.54
USP49-204ENST00000423567 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.66□□□□□ -0.54
USP49-204ENST00000423567 SLC2A4RGQ9NR83 387 aa11.66□□□□□ -0.54
USP49-204ENST00000423567 WNT16Q9UBV4 365 aa11.66□□□□□ -0.54
USP49-204ENST00000423567 SLC38A8A6NNN8 435 aa11.65□□□□□ -0.54
USP49-204ENST00000423567 MOSPD3O75425 235 aa11.65□□□□□ -0.54
USP49-204ENST00000423567 GNA14O95837 355 aa11.65□□□□□ -0.54
USP49-204ENST00000423567 ASPAP45381 313 aa11.65□□□□□ -0.54
USP49-204ENST00000423567 STX17P56962 302 aa11.65□□□□□ -0.54
USP49-204ENST00000423567 MCCD1P59942 119 aaPredicted RBP11.65□□□□□ -0.54
USP49-204ENST00000423567 CCDC142Q17RM4 750 aa11.65□□□□□ -0.54
USP49-204ENST00000423567 SDHAF4Q5VUM1 108 aa11.65□□□□□ -0.54
USP49-204ENST00000423567 TANGO2Q6ICL3 276 aa11.65□□□□□ -0.54
USP49-204ENST00000423567 GAREM2Q75VX8 874 aa11.65□□□□□ -0.54
USP49-204ENST00000423567 SIX5Q8N196 739 aa11.65□□□□□ -0.54
USP49-204ENST00000423567 DEPDC1BQ8WUY9 529 aa11.65□□□□□ -0.54
USP49-204ENST00000423567 MRPS31Q92665 395 aaKnown RBP11.65□□□□□ -0.54
USP49-204ENST00000423567 ELMO3Q96BJ8 720 aa11.65□□□□□ -0.54
USP49-204ENST00000423567 RPP25Q9BUL9 199 aaKnown RBP11.65□□□□□ -0.54
USP49-204ENST00000423567 NUP62CLQ9H1M0 184 aa11.65□□□□□ -0.54
USP49-204ENST00000423567 DPEP3Q9H4B8 488 aa11.65□□□□□ -0.54
USP49-204ENST00000423567 TASP1Q9H6P5 420 aa11.65□□□□□ -0.54
USP49-204ENST00000423567 RAB20Q9NX57 234 aa11.65□□□□□ -0.54
USP49-204ENST00000423567 NOL4O94818 638 aa11.64□□□□□ -0.55
USP49-204ENST00000423567 HMGA1P17096 107 aaKnown RBP11.64□□□□□ -0.55
USP49-204ENST00000423567 PSMC3P17980 439 aa11.64□□□□□ -0.55
USP49-204ENST00000423567 BMP6P22004 513 aa11.64□□□□□ -0.55
USP49-204ENST00000423567 DDX6P26196 483 aaKnown RBP eCLIP11.64□□□□□ -0.55
USP49-204ENST00000423567 NDST1P52848 882 aa11.64□□□□□ -0.55
USP49-204ENST00000423567 NLRP12P59046 1061 aa11.64□□□□□ -0.55
USP49-204ENST00000423567 GPC5P78333 572 aa11.64□□□□□ -0.55
USP49-204ENST00000423567 CYP4F8P98187 520 aa11.64□□□□□ -0.55
USP49-204ENST00000423567 DSG2Q14126 1118 aa11.64□□□□□ -0.55
USP49-204ENST00000423567 TTI2Q6NXR4 508 aa11.64□□□□□ -0.55
USP49-204ENST00000423567 DENND5BQ6ZUT9 1274 aa11.64□□□□□ -0.55
USP49-204ENST00000423567 ACOT1Q86TX2 421 aa11.64□□□□□ -0.55
USP49-204ENST00000423567 PLPP6Q8IY26 295 aa11.64□□□□□ -0.55
USP49-204ENST00000423567 YAF2Q8IY57 180 aa11.64□□□□□ -0.55
USP49-204ENST00000423567 MLKLQ8NB16 471 aa11.64□□□□□ -0.55
USP49-204ENST00000423567 TRMT2BQ96GJ1 504 aaKnown RBP11.64□□□□□ -0.55
USP49-204ENST00000423567 FAXDC2Q96IV6 333 aa11.64□□□□□ -0.55
USP49-204ENST00000423567 SHDQ96IW2 340 aa11.64□□□□□ -0.55
USP49-204ENST00000423567 SPATA17Q96L03 361 aa11.64□□□□□ -0.55
USP49-204ENST00000423567 C8orf48Q96LL4 319 aa11.64□□□□□ -0.55
USP49-204ENST00000423567 ZSWIM3Q96MP5 696 aa11.64□□□□□ -0.55
USP49-204ENST00000423567 TRMT61BQ9BVS5 477 aaKnown RBP11.64□□□□□ -0.55
USP49-204ENST00000423567 NT5C1AQ9BXI3 368 aa11.64□□□□□ -0.55
USP49-204ENST00000423567 BCO2Q9BYV7 579 aa11.64□□□□□ -0.55
USP49-204ENST00000423567 SDCBP2Q9H190 292 aa11.64□□□□□ -0.55
USP49-204ENST00000423567 BRD9Q9H8M2 597 aa11.64□□□□□ -0.55
USP49-204ENST00000423567 TRPV4Q9HBA0 871 aa11.64□□□□□ -0.55
USP49-204ENST00000423567 IL21Q9HBE4 155 aa11.64□□□□□ -0.55
USP49-204ENST00000423567 ARHGEF3Q9NR81 526 aa11.64□□□□□ -0.55
USP49-204ENST00000423567 DACH1Q9UI36 760 aa11.64□□□□□ -0.55
USP49-204ENST00000423567 CA14Q9ULX7 337 aa11.64□□□□□ -0.55
USP49-204ENST00000423567 SOBPA7XYQ1 873 aa11.63□□□□□ -0.55
USP49-204ENST00000423567 F8VP50 259 aa11.63□□□□□ -0.55
USP49-204ENST00000423567 PDGFBP01127 241 aaPredicted RBP11.63□□□□□ -0.55
USP49-204ENST00000423567 CCDC192P0DO97 292 aa11.63□□□□□ -0.55
USP49-204ENST00000423567 CD58P19256 250 aa11.63□□□□□ -0.55
USP49-204ENST00000423567 AVPR1AP37288 418 aa11.63□□□□□ -0.55
USP49-204ENST00000423567 VIPR2P41587 438 aa11.63□□□□□ -0.55
USP49-204ENST00000423567 YWHAEP62258 255 aaKnown RBP11.63□□□□□ -0.55
USP49-204ENST00000423567 GRM2Q14416 872 aa11.63□□□□□ -0.55
USP49-204ENST00000423567 TPD52L1Q16890 204 aaPredicted RBP11.63□□□□□ -0.55
USP49-204ENST00000423567 STXBP5Q5T5C0 1151 aa11.63□□□□□ -0.55
USP49-204ENST00000423567 ARID3BQ8IVW6 561 aaPredicted RBP11.63□□□□□ -0.55
USP49-204ENST00000423567 STKLD1Q8NE28 680 aa11.63□□□□□ -0.55
USP49-204ENST00000423567 FLCNQ8NFG4 579 aa11.63□□□□□ -0.55
USP49-204ENST00000423567 IRF7Q92985 503 aa11.63□□□□□ -0.55
USP49-204ENST00000423567 SLC35C1Q96A29 364 aa11.63□□□□□ -0.55
USP49-204ENST00000423567 SMARCD1Q96GM5 515 aa11.63□□□□□ -0.55
USP49-204ENST00000423567 MYRFLQ96LU7 910 aa11.63□□□□□ -0.55
USP49-204ENST00000423567 PRRX2Q99811 253 aa11.63□□□□□ -0.55
USP49-204ENST00000423567 DUSP9Q99956 384 aaKnown RBP11.63□□□□□ -0.55
USP49-204ENST00000423567 SRRTQ9BXP5 876 aaKnown RBP11.63□□□□□ -0.55
USP49-204ENST00000423567 B3GNT5Q9BYG0 378 aa11.63□□□□□ -0.55
USP49-204ENST00000423567 ZNF518BQ9C0D4 1074 aa11.63□□□□□ -0.55
USP49-204ENST00000423567 FAM124BQ9H5Z6 455 aaPredicted RBP11.63□□□□□ -0.55
USP49-204ENST00000423567 APOBEC3GQ9HC16 384 aaKnown RBP11.63□□□□□ -0.55
USP49-204ENST00000423567 LMBRD1Q9NUN5 540 aa11.63□□□□□ -0.55
USP49-204ENST00000423567 RWDD2AQ9UIY3 292 aa11.63□□□□□ -0.55
USP49-204ENST00000423567 NME7Q9Y5B8 376 aa11.63□□□□□ -0.55
USP49-204ENST00000423567 PCDHGA4Q9Y5G9 962 aa11.63□□□□□ -0.55
USP49-204ENST00000423567 HEPACAM2A8MVW5 462 aa11.62□□□□□ -0.55
USP49-204ENST00000423567 ZNF263O14978 683 aa11.62□□□□□ -0.55
USP49-204ENST00000423567 F11P03951 625 aa11.62□□□□□ -0.55
USP49-204ENST00000423567 FCARP24071 287 aa11.62□□□□□ -0.55
USP49-204ENST00000423567 WEE1P30291 646 aa11.62□□□□□ -0.55
USP49-204ENST00000423567 AVPR2P30518 371 aa11.62□□□□□ -0.55
USP49-204ENST00000423567 GDI1P31150 447 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms