RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 TJAP1Q5JTD0 557 aa18.02■□□□□ 0.48
COL7A1-202ENST00000422991 ANKRD54Q6NXT1 300 aa18.02■□□□□ 0.48
COL7A1-202ENST00000422991 VSTM1Q6UX27 236 aa18.02■□□□□ 0.48
COL7A1-202ENST00000422991 TMC6Q7Z403 805 aa18.02■□□□□ 0.48
COL7A1-202ENST00000422991 SLC47A2Q86VL8 602 aa18.02■□□□□ 0.48
COL7A1-202ENST00000422991 COL25A1Q9BXS0 654 aaPredicted RBP18.02■□□□□ 0.48
COL7A1-202ENST00000422991 ZDHHC7Q9NXF8 308 aa18.02■□□□□ 0.48
COL7A1-202ENST00000422991 CLEC1BQ9P126 229 aa18.02■□□□□ 0.48
COL7A1-202ENST00000422991 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.02■□□□□ 0.48
COL7A1-202ENST00000422991 C2orf16Q68DN1 1984 aa18.02■□□□□ 0.47
COL7A1-202ENST00000422991 GREB1Q4ZG55 1949 aa18.02■□□□□ 0.47
COL7A1-202ENST00000422991 THAP12O43422 761 aa18.01■□□□□ 0.47
COL7A1-202ENST00000422991 RFPL2O75678 378 aa18.01■□□□□ 0.47
COL7A1-202ENST00000422991 AP1G2O75843 785 aa18.01■□□□□ 0.47
COL7A1-202ENST00000422991 PAPLNO95428 1278 aa18.01■□□□□ 0.47
COL7A1-202ENST00000422991 ADCY5O95622 1261 aa18.01■□□□□ 0.47
COL7A1-202ENST00000422991 HNRNPA1P09651 372 aaKnown RBP eCLIP18.01■□□□□ 0.47
COL7A1-202ENST00000422991 FAM200BP0CF97 657 aa18.01■□□□□ 0.47
COL7A1-202ENST00000422991 ATF6P18850 670 aa18.01■□□□□ 0.47
COL7A1-202ENST00000422991 LTBRP36941 435 aa18.01■□□□□ 0.47
COL7A1-202ENST00000422991 ZBED6P86452 979 aa18.01■□□□□ 0.47
COL7A1-202ENST00000422991 PLD1Q13393 1074 aa18.01■□□□□ 0.47
COL7A1-202ENST00000422991 STILQ15468 1287 aa18.01■□□□□ 0.47
COL7A1-202ENST00000422991 CNGA2Q16280 664 aa18.01■□□□□ 0.47
COL7A1-202ENST00000422991 GOLGA7BQ2TAP0 167 aa18.01■□□□□ 0.47
COL7A1-202ENST00000422991 PPM1LQ5SGD2 360 aa18.01■□□□□ 0.47
COL7A1-202ENST00000422991 E4F1Q66K89 784 aaPredicted RBP18.01■□□□□ 0.47
COL7A1-202ENST00000422991 LCLAT1Q6UWP7 414 aa18.01■□□□□ 0.47
COL7A1-202ENST00000422991 GPIHBP1Q8IV16 184 aa18.01■□□□□ 0.47
COL7A1-202ENST00000422991 FMNL3Q8IVF7 1028 aa18.01■□□□□ 0.47
COL7A1-202ENST00000422991 CMASQ8NFW8 434 aaPredicted RBP18.01■□□□□ 0.47
COL7A1-202ENST00000422991 EPS8L1Q8TE68 723 aa18.01■□□□□ 0.47
COL7A1-202ENST00000422991 ASB2Q96Q27 587 aa18.01■□□□□ 0.47
COL7A1-202ENST00000422991 SFXN1Q9H9B4 322 aa18.01■□□□□ 0.47
COL7A1-202ENST00000422991 TSPAN16Q9UKR8 245 aa18.01■□□□□ 0.47
COL7A1-202ENST00000422991 COG5Q9UP83 839 aa18.01■□□□□ 0.47
COL7A1-202ENST00000422991 MED7O43513 233 aa18■□□□□ 0.47
COL7A1-202ENST00000422991 POU2F2P09086 479 aa18■□□□□ 0.47
COL7A1-202ENST00000422991 CYP11B1P15538 503 aa18■□□□□ 0.47
COL7A1-202ENST00000422991 CDC25BP30305 580 aa18■□□□□ 0.47
COL7A1-202ENST00000422991 CASP14P31944 242 aa18■□□□□ 0.47
COL7A1-202ENST00000422991 ALDH1A3P47895 512 aa18■□□□□ 0.47
COL7A1-202ENST00000422991 GPR15P49685 360 aa18■□□□□ 0.47
COL7A1-202ENST00000422991 PDE6CP51160 858 aa18■□□□□ 0.47
COL7A1-202ENST00000422991 RPL10AP62906 217 aaKnown RBP18■□□□□ 0.47
COL7A1-202ENST00000422991 DLX2Q07687 328 aaPredicted RBP18■□□□□ 0.47
COL7A1-202ENST00000422991 TWF1Q12792 350 aa18■□□□□ 0.47
COL7A1-202ENST00000422991 TBX2Q13207 712 aaPredicted RBP18■□□□□ 0.47
COL7A1-202ENST00000422991 MEA1Q16626 185 aa18■□□□□ 0.47
COL7A1-202ENST00000422991 AAK1Q2M2I8 961 aa18■□□□□ 0.47
COL7A1-202ENST00000422991 SYCE2Q6PIF2 218 aa18■□□□□ 0.47
COL7A1-202ENST00000422991 CLEC20AQ6ZU45 233 aa18■□□□□ 0.47
COL7A1-202ENST00000422991 TTC30AQ86WT1 665 aa18■□□□□ 0.47
COL7A1-202ENST00000422991 SCN4BQ8IWT1 228 aa18■□□□□ 0.47
COL7A1-202ENST00000422991 ANKRD52Q8NB46 1076 aa18■□□□□ 0.47
COL7A1-202ENST00000422991 CPLX3Q8WVH0 158 aa18■□□□□ 0.47
COL7A1-202ENST00000422991 ZNF606Q8WXB4 792 aa18■□□□□ 0.47
COL7A1-202ENST00000422991 C8orf48Q96LL4 319 aa18■□□□□ 0.47
COL7A1-202ENST00000422991 SMOQ99835 787 aa18■□□□□ 0.47
COL7A1-202ENST00000422991 DUSP16Q9BY84 665 aa18■□□□□ 0.47
COL7A1-202ENST00000422991 CSNK1G1Q9HCP0 422 aa18■□□□□ 0.47
COL7A1-202ENST00000422991 DMAP1Q9NPF5 467 aaPredicted RBP18■□□□□ 0.47
COL7A1-202ENST00000422991 NOCTQ9UK39 431 aaKnown RBP18■□□□□ 0.47
COL7A1-202ENST00000422991 LUC7L2Q9Y383 392 aaKnown RBP18■□□□□ 0.47
COL7A1-202ENST00000422991 SPTBN5Q9NRC6 3674 aaKnown RBP17.99■□□□□ 0.47
COL7A1-202ENST00000422991 SPDYE4A6NLX3 237 aa17.99■□□□□ 0.47
COL7A1-202ENST00000422991 F8VP50 259 aa17.99■□□□□ 0.47
COL7A1-202ENST00000422991 TRIM66O15016 1216 aa17.99■□□□□ 0.47
COL7A1-202ENST00000422991 MICAL2O94851 1124 aa17.99■□□□□ 0.47
COL7A1-202ENST00000422991 LRG1P02750 347 aa17.99■□□□□ 0.47
COL7A1-202ENST00000422991 FERP16591 822 aa17.99■□□□□ 0.47
COL7A1-202ENST00000422991 NPR3P17342 541 aa17.99■□□□□ 0.47
COL7A1-202ENST00000422991 HOXB8P17481 243 aaPredicted RBP17.99■□□□□ 0.47
COL7A1-202ENST00000422991 GRIK1P39086 918 aa17.99■□□□□ 0.47
COL7A1-202ENST00000422991 BCAT1P54687 386 aa17.99■□□□□ 0.47
COL7A1-202ENST00000422991 DDR2Q16832 855 aa17.99■□□□□ 0.47
COL7A1-202ENST00000422991 PKDCCQ504Y2 493 aa17.99■□□□□ 0.47
COL7A1-202ENST00000422991 SFMBT2Q5VUG0 894 aa17.99■□□□□ 0.47
COL7A1-202ENST00000422991 NOP9Q86U38 636 aaKnown RBP17.99■□□□□ 0.47
COL7A1-202ENST00000422991 C12orf76Q8N812 135 aaPredicted RBP17.99■□□□□ 0.47
COL7A1-202ENST00000422991 ZMIZ2Q8NF64 920 aa17.99■□□□□ 0.47
COL7A1-202ENST00000422991 ZNF397Q8NF99 534 aaPredicted RBP17.99■□□□□ 0.47
COL7A1-202ENST00000422991 DDX1Q92499 740 aaKnown RBP17.99■□□□□ 0.47
COL7A1-202ENST00000422991 HLA-CQ95604 372 aa17.99■□□□□ 0.47
COL7A1-202ENST00000422991 ZNF707Q96C28 371 aaPredicted RBP17.99■□□□□ 0.47
COL7A1-202ENST00000422991 MSLNLQ96KJ4 702 aa17.99■□□□□ 0.47
COL7A1-202ENST00000422991 NUCKS1Q9H1E3 243 aaKnown RBP17.99■□□□□ 0.47
COL7A1-202ENST00000422991 UBE2ZQ9H832 354 aaPredicted RBP17.99■□□□□ 0.47
COL7A1-202ENST00000422991 AIPL1Q9NZN9 384 aa17.99■□□□□ 0.47
COL7A1-202ENST00000422991 HESX1Q9UBX0 185 aa17.99■□□□□ 0.47
COL7A1-202ENST00000422991 M0QYV0 167 aa17.98■□□□□ 0.47
COL7A1-202ENST00000422991 CCL16O15467 120 aa17.98■□□□□ 0.47
COL7A1-202ENST00000422991 BEST1O76090 585 aa17.98■□□□□ 0.47
COL7A1-202ENST00000422991 TPM1P09493 284 aa17.98■□□□□ 0.47
COL7A1-202ENST00000422991 ANXA13P27216 316 aa17.98■□□□□ 0.47
COL7A1-202ENST00000422991 SSTR3P32745 418 aaPredicted RBP17.98■□□□□ 0.47
COL7A1-202ENST00000422991 MAP3K7CLP57077 242 aa17.98■□□□□ 0.47
COL7A1-202ENST00000422991 ARID5AQ03989 594 aa17.98■□□□□ 0.47
COL7A1-202ENST00000422991 BST2Q10589 180 aaKnown RBP17.98■□□□□ 0.47
COL7A1-202ENST00000422991 ASIC2Q16515 512 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms