RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 ANXA13P27216 316 aa23.36■■□□□ 1.33
TRAF4-204ENST00000422344 GDI1P31150 447 aa23.36■■□□□ 1.33
TRAF4-204ENST00000422344 GRIK1P39086 918 aa23.36■■□□□ 1.33
TRAF4-204ENST00000422344 STARD6P59095 220 aa23.36■■□□□ 1.33
TRAF4-204ENST00000422344 ENPEPQ07075 957 aa23.36■■□□□ 1.33
TRAF4-204ENST00000422344 COBLL1Q53SF7 1204 aa23.36■■□□□ 1.33
TRAF4-204ENST00000422344 ARID3BQ8IVW6 561 aaPredicted RBP23.36■■□□□ 1.33
TRAF4-204ENST00000422344 ELOA2Q8IYF1 753 aaPredicted RBP23.36■■□□□ 1.33
TRAF4-204ENST00000422344 STKLD1Q8NE28 680 aa23.36■■□□□ 1.33
TRAF4-204ENST00000422344 SPATA20Q8TB22 786 aa23.36■■□□□ 1.33
TRAF4-204ENST00000422344 MRPS31Q92665 395 aaKnown RBP23.36■■□□□ 1.33
TRAF4-204ENST00000422344 DNASE1L2Q92874 299 aa23.36■■□□□ 1.33
TRAF4-204ENST00000422344 IRF7Q92985 503 aa23.36■■□□□ 1.33
TRAF4-204ENST00000422344 RMDN1Q96DB5 314 aa23.36■■□□□ 1.33
TRAF4-204ENST00000422344 PCED1BQ96HM7 432 aa23.36■■□□□ 1.33
TRAF4-204ENST00000422344 MKNK1Q9BUB5 465 aa23.36■■□□□ 1.33
TRAF4-204ENST00000422344 ZNF263O14978 683 aa23.35■■□□□ 1.33
TRAF4-204ENST00000422344 GADD45BO75293 160 aaPredicted RBP23.35■■□□□ 1.33
TRAF4-204ENST00000422344 NOL4O94818 638 aa23.35■■□□□ 1.33
TRAF4-204ENST00000422344 HLA-DRAP01903 254 aa23.35■■□□□ 1.33
TRAF4-204ENST00000422344 PTPN1P18031 435 aaKnown RBP23.35■■□□□ 1.33
TRAF4-204ENST00000422344 RAP1GAPP47736 663 aa23.35■■□□□ 1.33
TRAF4-204ENST00000422344 GCLMP48507 274 aa23.35■■□□□ 1.33
TRAF4-204ENST00000422344 NLRP12P59046 1061 aa23.35■■□□□ 1.33
TRAF4-204ENST00000422344 C1orf220Q5T0J3 134 aa23.35■■□□□ 1.33
TRAF4-204ENST00000422344 MFSD6LQ8IWD5 586 aa23.35■■□□□ 1.33
TRAF4-204ENST00000422344 CCDC150Q8NCX0 1101 aa23.35■■□□□ 1.33
TRAF4-204ENST00000422344 CEP250Q9BV73 2442 aa23.35■■□□□ 1.33
TRAF4-204ENST00000422344 TRIM66O15016 1216 aa23.34■■□□□ 1.33
TRAF4-204ENST00000422344 STX10O60499 249 aa23.34■■□□□ 1.33
TRAF4-204ENST00000422344 DDX6P26196 483 aaKnown RBP eCLIP23.34■■□□□ 1.33
TRAF4-204ENST00000422344 CDH8P55286 799 aa23.34■■□□□ 1.33
TRAF4-204ENST00000422344 TPRG1Q6ZUI0 275 aa23.34■■□□□ 1.33
TRAF4-204ENST00000422344 GPIHBP1Q8IV16 184 aa23.34■■□□□ 1.33
TRAF4-204ENST00000422344 B3GALNT2Q8NCR0 500 aa23.34■■□□□ 1.33
TRAF4-204ENST00000422344 ELMO3Q96BJ8 720 aa23.34■■□□□ 1.33
TRAF4-204ENST00000422344 EEF2KMTQ96G04 330 aa23.34■■□□□ 1.33
TRAF4-204ENST00000422344 TRMT2BQ96GJ1 504 aaKnown RBP23.34■■□□□ 1.33
TRAF4-204ENST00000422344 TNIP3Q96KP6 325 aa23.34■■□□□ 1.33
TRAF4-204ENST00000422344 ELOVL4Q9GZR5 314 aa23.34■■□□□ 1.33
TRAF4-204ENST00000422344 DPEP3Q9H4B8 488 aa23.34■■□□□ 1.33
TRAF4-204ENST00000422344 NME7Q9Y5B8 376 aa23.34■■□□□ 1.33
TRAF4-204ENST00000422344 ATP8B3O60423 1300 aa23.33■■□□□ 1.33
TRAF4-204ENST00000422344 COL4A3Q01955 1670 aa23.33■■□□□ 1.33
TRAF4-204ENST00000422344 KANSL1LA0AUZ9 987 aa23.33■■□□□ 1.33
TRAF4-204ENST00000422344 PSMA7O14818 248 aa23.33■■□□□ 1.33
TRAF4-204ENST00000422344 ASS1P00966 412 aaKnown RBP23.33■■□□□ 1.33
TRAF4-204ENST00000422344 F11P03951 625 aa23.33■■□□□ 1.33
TRAF4-204ENST00000422344 TRIM21P19474 475 aaKnown RBP23.33■■□□□ 1.33
TRAF4-204ENST00000422344 AVPR1AP37288 418 aa23.33■■□□□ 1.33
TRAF4-204ENST00000422344 PPP1R2P41236 205 aa23.33■■□□□ 1.33
TRAF4-204ENST00000422344 PPP3CAQ08209 521 aa23.33■■□□□ 1.33
TRAF4-204ENST00000422344 ISM2Q6H9L7 571 aa23.33■■□□□ 1.33
TRAF4-204ENST00000422344 SPATA17Q96L03 361 aa23.33■■□□□ 1.33
TRAF4-204ENST00000422344 MYRFLQ96LU7 910 aa23.33■■□□□ 1.33
TRAF4-204ENST00000422344 CEP295NLQ96MC4 621 aa23.33■■□□□ 1.33
TRAF4-204ENST00000422344 HEBP1Q9NRV9 189 aa23.33■■□□□ 1.33
TRAF4-204ENST00000422344 OBP2AQ9NY56 170 aa23.33■■□□□ 1.33
TRAF4-204ENST00000422344 EHD2Q9NZN4 543 aa23.33■■□□□ 1.33
TRAF4-204ENST00000422344 DNAH14Q0VDD8 3507 aa23.32■■□□□ 1.32
TRAF4-204ENST00000422344 GPR179Q6PRD1 2367 aa23.32■■□□□ 1.32
TRAF4-204ENST00000422344 WEE1P30291 646 aa23.32■■□□□ 1.32
TRAF4-204ENST00000422344 GTF2H1P32780 548 aa23.32■■□□□ 1.32
TRAF4-204ENST00000422344 FKBP3Q00688 224 aaKnown RBP23.32■■□□□ 1.32
TRAF4-204ENST00000422344 LRRC63Q05C16 580 aa23.32■■□□□ 1.32
TRAF4-204ENST00000422344 UBXN2BQ14CS0 331 aa23.32■■□□□ 1.32
TRAF4-204ENST00000422344 ANKRD40Q6AI12 368 aa23.32■■□□□ 1.32
TRAF4-204ENST00000422344 SPOPLQ6IQ16 392 aa23.32■■□□□ 1.32
TRAF4-204ENST00000422344 TMEM150AQ86TG1 271 aa23.32■■□□□ 1.32
TRAF4-204ENST00000422344 MAML2Q8IZL2 1156 aaPredicted RBP23.32■■□□□ 1.32
TRAF4-204ENST00000422344 CMTM8Q8IZV2 173 aa23.32■■□□□ 1.32
TRAF4-204ENST00000422344 DCLK2Q8N568 766 aa23.32■■□□□ 1.32
TRAF4-204ENST00000422344 MAB21L3Q8N8X9 362 aa23.32■■□□□ 1.32
TRAF4-204ENST00000422344 CSGALNACT1Q8TDX6 532 aa23.32■■□□□ 1.32
TRAF4-204ENST00000422344 RUBCNQ92622 972 aa23.32■■□□□ 1.32
TRAF4-204ENST00000422344 RSPRY1Q96DX4 576 aa23.32■■□□□ 1.32
TRAF4-204ENST00000422344 SLC46A2Q9BY10 475 aa23.32■■□□□ 1.32
TRAF4-204ENST00000422344 TMEM8AQ9HCN3 771 aa23.32■■□□□ 1.32
TRAF4-204ENST00000422344 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.32■■□□□ 1.321e-9■■■■■ 64.8
TRAF4-204ENST00000422344 MAN1B1Q9UKM7 699 aa23.32■■□□□ 1.32
TRAF4-204ENST00000422344 NUP210Q8TEM1 1887 aaPredicted RBP23.31■■□□□ 1.32
TRAF4-204ENST00000422344 SOBPA7XYQ1 873 aa23.31■■□□□ 1.32
TRAF4-204ENST00000422344 SLC16A3O15427 465 aaKnown RBP23.31■■□□□ 1.32
TRAF4-204ENST00000422344 UBE2HP62256 183 aa23.31■■□□□ 1.32
TRAF4-204ENST00000422344 KRT39Q6A163 491 aa23.31■■□□□ 1.32
TRAF4-204ENST00000422344 ZNF852Q6ZMS4 543 aa23.31■■□□□ 1.32
TRAF4-204ENST00000422344 DGLUCYQ7Z3D6 616 aa23.31■■□□□ 1.32
TRAF4-204ENST00000422344 CELF5Q8N6W0 485 aaKnown RBP23.31■■□□□ 1.32
TRAF4-204ENST00000422344 TAS1R2Q8TE23 839 aa23.31■■□□□ 1.32
TRAF4-204ENST00000422344 DHTKD1Q96HY7 919 aaPredicted RBP23.31■■□□□ 1.32
TRAF4-204ENST00000422344 MED10Q9BTT4 135 aa23.31■■□□□ 1.32
TRAF4-204ENST00000422344 BCO2Q9BYV7 579 aa23.31■■□□□ 1.32
TRAF4-204ENST00000422344 SDCBP2Q9H190 292 aa23.31■■□□□ 1.32
TRAF4-204ENST00000422344 TRPV5Q9NQA5 729 aa23.31■■□□□ 1.32
TRAF4-204ENST00000422344 SPATA6Q9NWH7 488 aaPredicted RBP23.31■■□□□ 1.32
TRAF4-204ENST00000422344 MRPS17Q9Y2R5 130 aaKnown RBP23.31■■□□□ 1.32
TRAF4-204ENST00000422344 MTF2Q9Y483 593 aaPredicted RBP23.31■■□□□ 1.32
TRAF4-204ENST00000422344 NCANO14594 1321 aa23.31■■□□□ 1.32
TRAF4-204ENST00000422344 F8VP50 259 aa23.3■■□□□ 1.32
TRAF4-204ENST00000422344 CHADO15335 359 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms