RNA–Protein interactions for RNA: ENST00000421816.6

GCDH-202, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,109 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-202ENST00000421816 CSH2P0DML3 217 aa20.54■□□□□ 0.88
GCDH-202ENST00000421816 HMGA1P17096 107 aaKnown RBP20.54■□□□□ 0.88
GCDH-202ENST00000421816 SP100P23497 879 aaPredicted RBP20.54■□□□□ 0.88
GCDH-202ENST00000421816 GRIK1P39086 918 aa20.54■□□□□ 0.88
GCDH-202ENST00000421816 COPB1P53618 953 aaKnown RBP20.54■□□□□ 0.88
GCDH-202ENST00000421816 KCNMA1Q12791 1236 aa20.54■□□□□ 0.88
GCDH-202ENST00000421816 CYP4A22Q5TCH4 519 aa20.54■□□□□ 0.88
GCDH-202ENST00000421816 PDZD4Q76G19 769 aaPredicted RBP20.54■□□□□ 0.88
GCDH-202ENST00000421816 GET4Q7L5D6 327 aaPredicted RBP20.54■□□□□ 0.88
GCDH-202ENST00000421816 ZDHHC14Q8IZN3 488 aa20.54■□□□□ 0.88
GCDH-202ENST00000421816 GJD3Q8N144 294 aa20.54■□□□□ 0.88
GCDH-202ENST00000421816 TDRD5Q8NAT2 981 aaKnown RBP20.54■□□□□ 0.88
GCDH-202ENST00000421816 ANKRD20A12PQ8NF67 263 aa20.54■□□□□ 0.88
GCDH-202ENST00000421816 SLC2A14Q8TDB8 520 aa20.54■□□□□ 0.88
GCDH-202ENST00000421816 ACSF2Q96CM8 615 aaPredicted RBP20.54■□□□□ 0.88
GCDH-202ENST00000421816 TCEAL4Q96EI5 215 aa20.54■□□□□ 0.88
GCDH-202ENST00000421816 CYFIP2Q96F07 1278 aa20.54■□□□□ 0.88
GCDH-202ENST00000421816 SMARCD1Q96GM5 515 aa20.54■□□□□ 0.88
GCDH-202ENST00000421816 FAM81BQ96LP2 452 aa20.54■□□□□ 0.88
GCDH-202ENST00000421816 MED10Q9BTT4 135 aa20.54■□□□□ 0.88
GCDH-202ENST00000421816 CBX8Q9HC52 389 aa20.54■□□□□ 0.88
GCDH-202ENST00000421816 ZNF334Q9HCZ1 680 aaPredicted RBP20.54■□□□□ 0.88
GCDH-202ENST00000421816 UBE2TQ9NPD8 197 aaPredicted RBP20.54■□□□□ 0.88
GCDH-202ENST00000421816 APEX2Q9UBZ4 518 aa20.54■□□□□ 0.88
GCDH-202ENST00000421816 CNTN6Q9UQ52 1028 aa20.54■□□□□ 0.88
GCDH-202ENST00000421816 MRPS23Q9Y3D9 190 aaKnown RBP20.54■□□□□ 0.88
GCDH-202ENST00000421816 PATJQ8NI35 1801 aa20.53■□□□□ 0.88
GCDH-202ENST00000421816 SLC38A8A6NNN8 435 aa20.53■□□□□ 0.88
GCDH-202ENST00000421816 F8VP50 259 aa20.53■□□□□ 0.88
GCDH-202ENST00000421816 PES1O00541 588 aaKnown RBP20.53■□□□□ 0.88
GCDH-202ENST00000421816 NRG2O14511 850 aaPredicted RBP20.53■□□□□ 0.88
GCDH-202ENST00000421816 TPM2P07951 284 aa20.53■□□□□ 0.88
GCDH-202ENST00000421816 MYL4P12829 197 aa20.53■□□□□ 0.88
GCDH-202ENST00000421816 ATP1A3P13637 1013 aa20.53■□□□□ 0.88
GCDH-202ENST00000421816 CDK11BP21127 795 aaKnown RBP20.53■□□□□ 0.88
GCDH-202ENST00000421816 APBA1Q02410 837 aa20.53■□□□□ 0.88
GCDH-202ENST00000421816 SMYD5Q6GMV2 418 aa20.53■□□□□ 0.88
GCDH-202ENST00000421816 GJB7Q6PEY0 223 aa20.53■□□□□ 0.88
GCDH-202ENST00000421816 ENOSF1Q7L5Y1 443 aa20.53■□□□□ 0.88
GCDH-202ENST00000421816 PLCD3Q8N3E9 789 aa20.53■□□□□ 0.88
GCDH-202ENST00000421816 TRMT2BQ96GJ1 504 aaKnown RBP20.53■□□□□ 0.88
GCDH-202ENST00000421816 HEXIM2Q96MH2 286 aaKnown RBP20.53■□□□□ 0.88
GCDH-202ENST00000421816 COL25A1Q9BXS0 654 aaPredicted RBP20.53■□□□□ 0.88
GCDH-202ENST00000421816 IL21Q9HBE4 155 aa20.53■□□□□ 0.88
GCDH-202ENST00000421816 CSNK1G1Q9HCP0 422 aa20.53■□□□□ 0.88
GCDH-202ENST00000421816 EPS15L1Q9UBC2 864 aa20.53■□□□□ 0.88
GCDH-202ENST00000421816 CDH7Q9ULB5 785 aa20.53■□□□□ 0.88
GCDH-202ENST00000421816 PCDHB4Q9Y5E5 795 aa20.53■□□□□ 0.88
GCDH-202ENST00000421816 ZFP37Q9Y6Q3 630 aaPredicted RBP20.53■□□□□ 0.88
GCDH-202ENST00000421816 DENND4CQ5VZ89 1909 aa20.53■□□□□ 0.88
GCDH-202ENST00000421816 OBSL1O75147 1896 aa20.52■□□□□ 0.88
GCDH-202ENST00000421816 BECN2A8MW95 431 aa20.52■□□□□ 0.88
GCDH-202ENST00000421816 FGF19O95750 216 aa20.52■□□□□ 0.88
GCDH-202ENST00000421816 CEBPBP17676 345 aa20.52■□□□□ 0.88
GCDH-202ENST00000421816 ANXA13P27216 316 aa20.52■□□□□ 0.88
GCDH-202ENST00000421816 GBP2P32456 591 aaPredicted RBP20.52■□□□□ 0.88
GCDH-202ENST00000421816 ZNF132P52740 706 aa20.52■□□□□ 0.88
GCDH-202ENST00000421816 MFAP3P55082 362 aa20.52■□□□□ 0.88
GCDH-202ENST00000421816 MTMR3Q13615 1198 aa20.52■□□□□ 0.88
GCDH-202ENST00000421816 PPP1R26Q5T8A7 1209 aaPredicted RBP20.52■□□□□ 0.88
GCDH-202ENST00000421816 ARHGAP17Q68EM7 881 aa20.52■□□□□ 0.88
GCDH-202ENST00000421816 TMEM270Q6UE05 265 aa20.52■□□□□ 0.88
GCDH-202ENST00000421816 GAREM2Q75VX8 874 aa20.52■□□□□ 0.88
GCDH-202ENST00000421816 NPAS3Q8IXF0 933 aa20.52■□□□□ 0.88
GCDH-202ENST00000421816 STKLD1Q8NE28 680 aa20.52■□□□□ 0.88
GCDH-202ENST00000421816 SHKBP1Q8TBC3 707 aa20.52■□□□□ 0.88
GCDH-202ENST00000421816 FGF13Q92913 245 aa20.52■□□□□ 0.88
GCDH-202ENST00000421816 MYRFLQ96LU7 910 aa20.52■□□□□ 0.88
GCDH-202ENST00000421816 SMOQ99835 787 aa20.52■□□□□ 0.88
GCDH-202ENST00000421816 KRT82Q9NSB4 513 aa20.52■□□□□ 0.88
GCDH-202ENST00000421816 LGALS16A8MUM7 142 aa20.51■□□□□ 0.87
GCDH-202ENST00000421816 RNF225M0QZC1 329 aaPredicted RBP20.51■□□□□ 0.87
GCDH-202ENST00000421816 AP1G2O75843 785 aa20.51■□□□□ 0.87
GCDH-202ENST00000421816 PAEPP09466 180 aa20.51■□□□□ 0.87
GCDH-202ENST00000421816 LAMP2P13473 410 aa20.51■□□□□ 0.87
GCDH-202ENST00000421816 ADORA2BP29275 332 aa20.51■□□□□ 0.87
GCDH-202ENST00000421816 SSTR3P32745 418 aaPredicted RBP20.51■□□□□ 0.87
GCDH-202ENST00000421816 TAF12Q16514 161 aa20.51■□□□□ 0.87
GCDH-202ENST00000421816 POTEHQ6S545 545 aa20.51■□□□□ 0.87
GCDH-202ENST00000421816 ZMIZ2Q8NF64 920 aa20.51■□□□□ 0.87
GCDH-202ENST00000421816 ING5Q8WYH8 240 aa20.51■□□□□ 0.87
GCDH-202ENST00000421816 KCNK16Q96T55 309 aa20.51■□□□□ 0.87
GCDH-202ENST00000421816 DMAP1Q9NPF5 467 aaPredicted RBP20.51■□□□□ 0.87
GCDH-202ENST00000421816 KIAA1257Q9ULG3 409 aa20.51■□□□□ 0.87
GCDH-202ENST00000421816 MYH10P35580 1976 aa20.51■□□□□ 0.87
GCDH-202ENST00000421816 ZNF638Q14966 1978 aaKnown RBP20.5■□□□□ 0.87
GCDH-202ENST00000421816 BEST1O76090 585 aa20.5■□□□□ 0.87
GCDH-202ENST00000421816 F11P03951 625 aa20.5■□□□□ 0.87
GCDH-202ENST00000421816 FAM200BP0CF97 657 aa20.5■□□□□ 0.87
GCDH-202ENST00000421816 VDRP11473 427 aa20.5■□□□□ 0.87
GCDH-202ENST00000421816 GABRR2P28476 465 aa20.5■□□□□ 0.87
GCDH-202ENST00000421816 FKBP15Q5T1M5 1219 aa20.5■□□□□ 0.87
GCDH-202ENST00000421816 LRSAM1Q6UWE0 723 aa20.5■□□□□ 0.87
GCDH-202ENST00000421816 DENND5BQ6ZUT9 1274 aa20.5■□□□□ 0.87
GCDH-202ENST00000421816 TMEM150AQ86TG1 271 aa20.5■□□□□ 0.87
GCDH-202ENST00000421816 LUZP1Q86V48 1076 aa20.5■□□□□ 0.87
GCDH-202ENST00000421816 RBBP8NLQ8NC74 664 aaPredicted RBP20.5■□□□□ 0.87
GCDH-202ENST00000421816 TTLL2Q9BWV7 592 aa20.5■□□□□ 0.87
GCDH-202ENST00000421816 PLCB1Q9NQ66 1216 aa20.5■□□□□ 0.87
GCDH-202ENST00000421816 GDE1Q9NZC3 331 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms