RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 TRIM65Q6PJ69 517 aa16.73■□□□□ 0.27
BRAT1-202ENST00000421712 TMEM270Q6UE05 265 aa16.73■□□□□ 0.27
BRAT1-202ENST00000421712 FAM35AQ86V20 835 aa16.73■□□□□ 0.27
BRAT1-202ENST00000421712 DHX40Q8IX18 779 aaKnown RBP16.73■□□□□ 0.27
BRAT1-202ENST00000421712 FGF13Q92913 245 aa16.73■□□□□ 0.27
BRAT1-202ENST00000421712 TCEAL4Q96EI5 215 aa16.73■□□□□ 0.27
BRAT1-202ENST00000421712 MCRS1Q96EZ8 462 aa16.73■□□□□ 0.27
BRAT1-202ENST00000421712 SMARCD1Q96GM5 515 aa16.73■□□□□ 0.27
BRAT1-202ENST00000421712 ATXN3LQ9H3M9 355 aa16.73■□□□□ 0.27
BRAT1-202ENST00000421712 SLITRK6Q9H5Y7 841 aa16.73■□□□□ 0.27
BRAT1-202ENST00000421712 FAM124BQ9H5Z6 455 aaPredicted RBP16.73■□□□□ 0.27
BRAT1-202ENST00000421712 ZNF334Q9HCZ1 680 aaPredicted RBP16.73■□□□□ 0.27
BRAT1-202ENST00000421712 CDH7Q9ULB5 785 aa16.73■□□□□ 0.27
BRAT1-202ENST00000421712 MYH10P35580 1976 aa16.72■□□□□ 0.27
BRAT1-202ENST00000421712 A0A1W2PRU2 124 aa16.72■□□□□ 0.27
BRAT1-202ENST00000421712 FGF19O95750 216 aa16.72■□□□□ 0.27
BRAT1-202ENST00000421712 KRT5P13647 590 aa16.72■□□□□ 0.27
BRAT1-202ENST00000421712 CD19P15391 556 aa16.72■□□□□ 0.27
BRAT1-202ENST00000421712 GABRR2P28476 465 aa16.72■□□□□ 0.27
BRAT1-202ENST00000421712 TPM4P67936 248 aa16.72■□□□□ 0.27
BRAT1-202ENST00000421712 GCNT1Q02742 428 aa16.72■□□□□ 0.27
BRAT1-202ENST00000421712 ARHGAP44Q17R89 818 aa16.72■□□□□ 0.27
BRAT1-202ENST00000421712 GJB7Q6PEY0 223 aa16.72■□□□□ 0.27
BRAT1-202ENST00000421712 FUKQ8N0W3 1084 aa16.72■□□□□ 0.27
BRAT1-202ENST00000421712 SLC4A11Q8NBS3 891 aa16.72■□□□□ 0.27
BRAT1-202ENST00000421712 FAM81BQ96LP2 452 aa16.72■□□□□ 0.27
BRAT1-202ENST00000421712 PCMTD1Q96MG8 357 aaPredicted RBP16.72■□□□□ 0.27
BRAT1-202ENST00000421712 CD320Q9NPF0 282 aa16.72■□□□□ 0.27
BRAT1-202ENST00000421712 AVENQ9NQS1 362 aaPredicted RBP16.72■□□□□ 0.27
BRAT1-202ENST00000421712 KRT82Q9NSB4 513 aa16.72■□□□□ 0.27
BRAT1-202ENST00000421712 A0A0C4DFX4 3053 aa16.72■□□□□ 0.27
BRAT1-202ENST00000421712 FAM200BP0CF97 657 aa16.71■□□□□ 0.27
BRAT1-202ENST00000421712 CEBPBP17676 345 aa16.71■□□□□ 0.27
BRAT1-202ENST00000421712 CDC25CP30307 473 aa16.71■□□□□ 0.27
BRAT1-202ENST00000421712 USP8P40818 1118 aa16.71■□□□□ 0.27
BRAT1-202ENST00000421712 CCR2P41597 374 aa16.71■□□□□ 0.27
BRAT1-202ENST00000421712 COPB1P53618 953 aaKnown RBP16.71■□□□□ 0.27
BRAT1-202ENST00000421712 CACNA2D1P54289 1103 aa16.71■□□□□ 0.27
BRAT1-202ENST00000421712 MAP3K7CLP57077 242 aa16.71■□□□□ 0.27
BRAT1-202ENST00000421712 APBA1Q02410 837 aa16.71■□□□□ 0.27
BRAT1-202ENST00000421712 IFRD2Q12894 506 aaPredicted RBP16.71■□□□□ 0.27
BRAT1-202ENST00000421712 TEAD2Q15562 447 aa16.71■□□□□ 0.27
BRAT1-202ENST00000421712 ARHGAP15Q53QZ3 475 aa16.71■□□□□ 0.27
BRAT1-202ENST00000421712 PRSS36Q5K4E3 855 aa16.71■□□□□ 0.27
BRAT1-202ENST00000421712 PPP1R26Q5T8A7 1209 aaPredicted RBP16.71■□□□□ 0.27
BRAT1-202ENST00000421712 PAQR9Q6ZVX9 377 aa16.71■□□□□ 0.27
BRAT1-202ENST00000421712 ENOSF1Q7L5Y1 443 aa16.71■□□□□ 0.27
BRAT1-202ENST00000421712 TMC8Q8IU68 726 aa16.71■□□□□ 0.27
BRAT1-202ENST00000421712 RNF135Q8IUD6 432 aa16.71■□□□□ 0.27
BRAT1-202ENST00000421712 ZDHHC14Q8IZN3 488 aa16.71■□□□□ 0.27
BRAT1-202ENST00000421712 SPATA17Q96L03 361 aa16.71■□□□□ 0.27
BRAT1-202ENST00000421712 C8orf48Q96LL4 319 aa16.71■□□□□ 0.27
BRAT1-202ENST00000421712 KREMEN1Q96MU8 473 aa16.71■□□□□ 0.27
BRAT1-202ENST00000421712 KCNK16Q96T55 309 aa16.71■□□□□ 0.27
BRAT1-202ENST00000421712 HNRNPABQ99729 332 aaKnown RBP16.71■□□□□ 0.27
BRAT1-202ENST00000421712 CBX8Q9HC52 389 aa16.71■□□□□ 0.27
BRAT1-202ENST00000421712 DMAP1Q9NPF5 467 aaPredicted RBP16.71■□□□□ 0.27
BRAT1-202ENST00000421712 EHD2Q9NZN4 543 aa16.71■□□□□ 0.27
BRAT1-202ENST00000421712 UXTQ9UBK9 157 aaPredicted RBP16.71■□□□□ 0.27
BRAT1-202ENST00000421712 APEX2Q9UBZ4 518 aa16.71■□□□□ 0.27
BRAT1-202ENST00000421712 LIMA1Q9UHB6 759 aaKnown RBP16.71■□□□□ 0.27
BRAT1-202ENST00000421712 ZFP37Q9Y6Q3 630 aaPredicted RBP16.71■□□□□ 0.27
BRAT1-202ENST00000421712 NOTCH4Q99466 2003 aa16.7■□□□□ 0.26
BRAT1-202ENST00000421712 GOLGA6L19H0YKK7 550 aa16.7■□□□□ 0.26
BRAT1-202ENST00000421712 CAVIN2O95810 425 aa16.7■□□□□ 0.26
BRAT1-202ENST00000421712 LAMP2P13473 410 aa16.7■□□□□ 0.26
BRAT1-202ENST00000421712 HMGA1P17096 107 aaKnown RBP16.7■□□□□ 0.26
BRAT1-202ENST00000421712 EPHA5P54756 1037 aa16.7■□□□□ 0.26
BRAT1-202ENST00000421712 UBXN1Q04323 297 aa16.7■□□□□ 0.26
BRAT1-202ENST00000421712 SGO2Q562F6 1265 aa16.7■□□□□ 0.26
BRAT1-202ENST00000421712 DENND5BQ6ZUT9 1274 aa16.7■□□□□ 0.26
BRAT1-202ENST00000421712 NPAS3Q8IXF0 933 aa16.7■□□□□ 0.26
BRAT1-202ENST00000421712 NUP93Q8N1F7 819 aa16.7■□□□□ 0.26
BRAT1-202ENST00000421712 RBBP8NLQ8NC74 664 aaPredicted RBP16.7■□□□□ 0.26
BRAT1-202ENST00000421712 ST13P5Q8NFI4 369 aaPredicted RBP16.7■□□□□ 0.26
BRAT1-202ENST00000421712 SHKBP1Q8TBC3 707 aa16.7■□□□□ 0.26
BRAT1-202ENST00000421712 JAKMIP2Q96AA8 810 aa16.7■□□□□ 0.26
BRAT1-202ENST00000421712 CEP295NLQ96MC4 621 aa16.7■□□□□ 0.26
BRAT1-202ENST00000421712 LSM14BQ9BX40 385 aaKnown RBP16.7■□□□□ 0.26
BRAT1-202ENST00000421712 LRRC3Q9BY71 257 aa16.7■□□□□ 0.26
BRAT1-202ENST00000421712 EPS15L1Q9UBC2 864 aa16.7■□□□□ 0.26
BRAT1-202ENST00000421712 KIAA1257Q9ULG3 409 aa16.7■□□□□ 0.26
BRAT1-202ENST00000421712 TNFRSF10AO00220 468 aa16.69■□□□□ 0.26
BRAT1-202ENST00000421712 NOL4O94818 638 aa16.69■□□□□ 0.26
BRAT1-202ENST00000421712 MICAL2O94851 1124 aa16.69■□□□□ 0.26
BRAT1-202ENST00000421712 VDRP11473 427 aa16.69■□□□□ 0.26
BRAT1-202ENST00000421712 ATP1A3P13637 1013 aa16.69■□□□□ 0.26
BRAT1-202ENST00000421712 ZNF18P17022 549 aa16.69■□□□□ 0.26
BRAT1-202ENST00000421712 ACO1P21399 889 aaKnown RBP16.69■□□□□ 0.26
BRAT1-202ENST00000421712 SLC8A3P57103 927 aa16.69■□□□□ 0.26
BRAT1-202ENST00000421712 KCNMA1Q12791 1236 aa16.69■□□□□ 0.26
BRAT1-202ENST00000421712 FILIP1LQ4L180 1135 aa16.69■□□□□ 0.26
BRAT1-202ENST00000421712 GPR158Q5T848 1215 aa16.69■□□□□ 0.26
BRAT1-202ENST00000421712 GAREM2Q75VX8 874 aa16.69■□□□□ 0.26
BRAT1-202ENST00000421712 LUZP1Q86V48 1076 aa16.69■□□□□ 0.26
BRAT1-202ENST00000421712 SMOQ99835 787 aa16.69■□□□□ 0.26
BRAT1-202ENST00000421712 GDE1Q9NZC3 331 aa16.69■□□□□ 0.26
BRAT1-202ENST00000421712 HESX1Q9UBX0 185 aa16.69■□□□□ 0.26
BRAT1-202ENST00000421712 DNAJC12Q9UKB3 198 aa16.69■□□□□ 0.26
BRAT1-202ENST00000421712 DENND4AQ7Z401 1863 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms