RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 ANO7Q6IWH7 933 aa10.98□□□□□ -0.65
TNFAIP3-202ENST00000420009 FAM184AQ8NB25 1140 aa10.98□□□□□ -0.65
TNFAIP3-202ENST00000420009 DEFB124Q8NES8 71 aa10.98□□□□□ -0.65
TNFAIP3-202ENST00000420009 CCDC26Q8TAB7 109 aa10.98□□□□□ -0.65
TNFAIP3-202ENST00000420009 ZNF560Q96MR9 790 aa10.98□□□□□ -0.65
TNFAIP3-202ENST00000420009 PARVGQ9HBI0 331 aa10.98□□□□□ -0.65
TNFAIP3-202ENST00000420009 DPP3Q9NY33 737 aa10.98□□□□□ -0.65
TNFAIP3-202ENST00000420009 MMP17Q9ULZ9 603 aa10.98□□□□□ -0.65
TNFAIP3-202ENST00000420009 NEUROG3Q9Y4Z2 214 aa10.98□□□□□ -0.65
TNFAIP3-202ENST00000420009 STYXL1Q9Y6J8 313 aa10.98□□□□□ -0.65
TNFAIP3-202ENST00000420009 LOC400499M0QZD8 3231 aa10.98□□□□□ -0.65
TNFAIP3-202ENST00000420009 FASNP49327 2511 aaKnown RBP10.97□□□□□ -0.65
TNFAIP3-202ENST00000420009 ANTXRLA6NF34 631 aa10.97□□□□□ -0.65
TNFAIP3-202ENST00000420009 SLC26A4O43511 780 aa10.97□□□□□ -0.65
TNFAIP3-202ENST00000420009 TRAK2O60296 914 aa10.97□□□□□ -0.65
TNFAIP3-202ENST00000420009 FAM13AO94988 1023 aa10.97□□□□□ -0.65
TNFAIP3-202ENST00000420009 HNRNPLP14866 589 aaKnown RBP eCLIP10.97□□□□□ -0.65
TNFAIP3-202ENST00000420009 CYP2F1P24903 491 aa10.97□□□□□ -0.65
TNFAIP3-202ENST00000420009 ABCD1P33897 745 aa10.97□□□□□ -0.65
TNFAIP3-202ENST00000420009 PNPLA4P41247 253 aa10.97□□□□□ -0.65
TNFAIP3-202ENST00000420009 RPL10AP62906 217 aaKnown RBP10.97□□□□□ -0.65
TNFAIP3-202ENST00000420009 GTF2BQ00403 316 aa10.97□□□□□ -0.65
TNFAIP3-202ENST00000420009 PSMD2Q13200 908 aa10.97□□□□□ -0.65
TNFAIP3-202ENST00000420009 CRY1Q16526 586 aa10.97□□□□□ -0.65
TNFAIP3-202ENST00000420009 CCDC142Q17RM4 750 aa10.97□□□□□ -0.65
TNFAIP3-202ENST00000420009 CFAP221Q4G0U5 840 aa10.97□□□□□ -0.65
TNFAIP3-202ENST00000420009 INTS6LQ5JSJ4 861 aaKnown RBP10.97□□□□□ -0.65
TNFAIP3-202ENST00000420009 ADALQ6DHV7 355 aa10.97□□□□□ -0.65
TNFAIP3-202ENST00000420009 CRELD2Q6UXH1 353 aaPredicted RBP10.97□□□□□ -0.65
TNFAIP3-202ENST00000420009 GPBP1Q86WP2 473 aa10.97□□□□□ -0.65
TNFAIP3-202ENST00000420009 PDCL2Q8N4E4 241 aa10.97□□□□□ -0.65
TNFAIP3-202ENST00000420009 MYCT1Q8N699 235 aa10.97□□□□□ -0.65
TNFAIP3-202ENST00000420009 SH3RF2Q8TEC5 729 aa10.97□□□□□ -0.65
TNFAIP3-202ENST00000420009 CDK5RAP3Q96JB5 506 aa10.97□□□□□ -0.65
TNFAIP3-202ENST00000420009 CYP2S1Q96SQ9 504 aa10.97□□□□□ -0.65
TNFAIP3-202ENST00000420009 ACBD6Q9BR61 282 aa10.97□□□□□ -0.65
TNFAIP3-202ENST00000420009 TRPC7Q9HCX4 862 aa10.97□□□□□ -0.65
TNFAIP3-202ENST00000420009 L1RE1Q9UN81 338 aa10.97□□□□□ -0.65
TNFAIP3-202ENST00000420009 ARHGAP26Q9UNA1 814 aa10.97□□□□□ -0.65
TNFAIP3-202ENST00000420009 ABCA7Q8IZY2 2146 aa10.97□□□□□ -0.65
TNFAIP3-202ENST00000420009 ZNF638Q14966 1978 aaKnown RBP10.96□□□□□ -0.65
TNFAIP3-202ENST00000420009 PTPRDP23468 1912 aa10.96□□□□□ -0.65
TNFAIP3-202ENST00000420009 TNRC6BQ9UPQ9 1833 aaKnown RBP10.96□□□□□ -0.65
TNFAIP3-202ENST00000420009 VWA3AA6NCI4 1184 aa10.96□□□□□ -0.65
TNFAIP3-202ENST00000420009 C2orf78A6NCI8 922 aa10.96□□□□□ -0.65
TNFAIP3-202ENST00000420009 TNFRSF10BO14763 440 aa10.96□□□□□ -0.65
TNFAIP3-202ENST00000420009 HYAL3O43820 417 aaPredicted RBP10.96□□□□□ -0.65
TNFAIP3-202ENST00000420009 NFATC1O95644 943 aa10.96□□□□□ -0.65
TNFAIP3-202ENST00000420009 P2RY2P41231 377 aa10.96□□□□□ -0.65
TNFAIP3-202ENST00000420009 DHPSP49366 369 aaPredicted RBP10.96□□□□□ -0.65
TNFAIP3-202ENST00000420009 SEC13P55735 322 aa10.96□□□□□ -0.65
TNFAIP3-202ENST00000420009 ZXDBP98169 803 aa10.96□□□□□ -0.65
TNFAIP3-202ENST00000420009 RING1Q06587 406 aa10.96□□□□□ -0.65
TNFAIP3-202ENST00000420009 LMAN2Q12907 356 aa10.96□□□□□ -0.65
TNFAIP3-202ENST00000420009 NR1H3Q13133 447 aa10.96□□□□□ -0.65
TNFAIP3-202ENST00000420009 UAP1L1Q3KQV9 507 aa10.96□□□□□ -0.65
TNFAIP3-202ENST00000420009 ZC2HC1CQ53FD0 456 aaPredicted RBP10.96□□□□□ -0.65
TNFAIP3-202ENST00000420009 C2orf27AQ580R0 203 aa10.96□□□□□ -0.65
TNFAIP3-202ENST00000420009 RILPL1Q5EBL4 403 aa10.96□□□□□ -0.65
TNFAIP3-202ENST00000420009 TRIM61Q5EBN2 209 aa10.96□□□□□ -0.65
TNFAIP3-202ENST00000420009 PEAR1Q5VY43 1037 aaPredicted RBP10.96□□□□□ -0.65
TNFAIP3-202ENST00000420009 ARL6IP4Q66PJ3 421 aaKnown RBP10.96□□□□□ -0.65
TNFAIP3-202ENST00000420009 KIAA1211LQ6NV74 962 aa10.96□□□□□ -0.65
TNFAIP3-202ENST00000420009 LRSAM1Q6UWE0 723 aa10.96□□□□□ -0.65
TNFAIP3-202ENST00000420009 PIP4P1Q86T03 277 aa10.96□□□□□ -0.65
TNFAIP3-202ENST00000420009 NT5DC4Q86YG4 428 aa10.96□□□□□ -0.65
TNFAIP3-202ENST00000420009 ARL14EPQ8N8R7 260 aaPredicted RBP10.96□□□□□ -0.65
TNFAIP3-202ENST00000420009 PIGKQ92643 395 aa10.96□□□□□ -0.65
TNFAIP3-202ENST00000420009 FUBP3Q96I24 572 aaKnown RBP eCLIP10.96□□□□□ -0.65
TNFAIP3-202ENST00000420009 FNBP1Q96RU3 617 aa10.96□□□□□ -0.65
TNFAIP3-202ENST00000420009 LINC00597Q9H2U6 94 aa10.96□□□□□ -0.65
TNFAIP3-202ENST00000420009 ST6GALNAC4Q9H4F1 302 aa10.96□□□□□ -0.65
TNFAIP3-202ENST00000420009 BLOC1S4Q9NUP1 217 aa10.96□□□□□ -0.65
TNFAIP3-202ENST00000420009 AGO2Q9UKV8 859 aaKnown RBP10.96□□□□□ -0.65
TNFAIP3-202ENST00000420009 LHX6Q9UPM6 363 aa10.96□□□□□ -0.65
TNFAIP3-202ENST00000420009 MSRB2Q9Y3D2 182 aa10.96□□□□□ -0.65
TNFAIP3-202ENST00000420009 HELZP42694 1942 aaKnown RBP10.96□□□□□ -0.66
TNFAIP3-202ENST00000420009 TCHHQ07283 1943 aa10.96□□□□□ -0.66
TNFAIP3-202ENST00000420009 ASCC3Q8N3C0 2202 aaKnown RBP10.95□□□□□ -0.66
TNFAIP3-202ENST00000420009 UPK3BL1B0FP48 263 aa10.95□□□□□ -0.66
TNFAIP3-202ENST00000420009 UPK3BL2E5RIL1 263 aa10.95□□□□□ -0.66
TNFAIP3-202ENST00000420009 IL18RAPO95256 599 aa10.95□□□□□ -0.66
TNFAIP3-202ENST00000420009 ENGP17813 658 aa10.95□□□□□ -0.66
TNFAIP3-202ENST00000420009 ACAT1P24752 427 aaKnown RBP10.95□□□□□ -0.66
TNFAIP3-202ENST00000420009 ADSSP30520 456 aa10.95□□□□□ -0.66
TNFAIP3-202ENST00000420009 POLR2BP30876 1174 aaKnown RBP10.95□□□□□ -0.66
TNFAIP3-202ENST00000420009 PTGER3P43115 390 aa10.95□□□□□ -0.66
TNFAIP3-202ENST00000420009 WNT7BP56706 349 aa10.95□□□□□ -0.66
TNFAIP3-202ENST00000420009 MRPS21P82921 87 aaKnown RBP10.95□□□□□ -0.66
TNFAIP3-202ENST00000420009 SEMA3BQ13214 749 aa10.95□□□□□ -0.66
TNFAIP3-202ENST00000420009 KCNB1Q14721 858 aa10.95□□□□□ -0.66
TNFAIP3-202ENST00000420009 SLFN12LQ6IEE8 588 aa10.95□□□□□ -0.66
TNFAIP3-202ENST00000420009 LPCAT2Q7L5N7 544 aa10.95□□□□□ -0.66
TNFAIP3-202ENST00000420009 SYT12Q8IV01 421 aa10.95□□□□□ -0.66
TNFAIP3-202ENST00000420009 TMEM86AQ8N2M4 240 aa10.95□□□□□ -0.66
TNFAIP3-202ENST00000420009 CCDC33Q8N5R6 958 aa10.95□□□□□ -0.66
TNFAIP3-202ENST00000420009 LRRC52Q8N7C0 313 aa10.95□□□□□ -0.66
TNFAIP3-202ENST00000420009 KIAA1958Q8N8K9 716 aa10.95□□□□□ -0.66
TNFAIP3-202ENST00000420009 TTC16Q8NEE8 873 aa10.95□□□□□ -0.66
TNFAIP3-202ENST00000420009 CXorf38Q8TB03 319 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms