RNA–Protein interactions for RNA: ENST00000419606.5

ATG4B-208, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 553 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-208ENST00000419606 CCDC172P0C7W6 258 aa13.58□□□□□ -0.24
ATG4B-208ENST00000419606 FAM228BP0C875 321 aa13.58□□□□□ -0.24
ATG4B-208ENST00000419606 EPCAMP16422 314 aa13.58□□□□□ -0.24
ATG4B-208ENST00000419606 TNFAIP3P21580 790 aa13.58□□□□□ -0.24
ATG4B-208ENST00000419606 NRIP1P48552 1158 aa13.58□□□□□ -0.24
ATG4B-208ENST00000419606 CLCN4P51793 760 aa13.58□□□□□ -0.24
ATG4B-208ENST00000419606 MAP3K7CLP57077 242 aa13.58□□□□□ -0.24
ATG4B-208ENST00000419606 GSDMDP57764 484 aa13.58□□□□□ -0.24
ATG4B-208ENST00000419606 CREMQ03060 361 aa13.58□□□□□ -0.24
ATG4B-208ENST00000419606 PDE4CQ08493 712 aa13.58□□□□□ -0.24
ATG4B-208ENST00000419606 BMS1Q14692 1282 aaKnown RBP13.58□□□□□ -0.24
ATG4B-208ENST00000419606 MAPRE1Q15691 268 aaKnown RBP13.58□□□□□ -0.24
ATG4B-208ENST00000419606 NFE2Q16621 373 aaPredicted RBP13.58□□□□□ -0.24
ATG4B-208ENST00000419606 DDR2Q16832 855 aa13.58□□□□□ -0.24
ATG4B-208ENST00000419606 ASTE1Q2TB18 679 aaPredicted RBP13.58□□□□□ -0.24
ATG4B-208ENST00000419606 HABP4Q5JVS0 413 aaKnown RBP13.58□□□□□ -0.24
ATG4B-208ENST00000419606 ZNF697Q5TEC3 545 aa13.58□□□□□ -0.24
ATG4B-208ENST00000419606 SMYD5Q6GMV2 418 aa13.58□□□□□ -0.24
ATG4B-208ENST00000419606 PDE12Q6L8Q7 609 aaKnown RBP13.58□□□□□ -0.24
ATG4B-208ENST00000419606 LLGL2Q6P1M3 1020 aa13.58□□□□□ -0.24
ATG4B-208ENST00000419606 RAD9BQ6WBX8 426 aa13.58□□□□□ -0.24
ATG4B-208ENST00000419606 C4orf50Q6ZRC1 276 aa13.58□□□□□ -0.24
ATG4B-208ENST00000419606 CLEC20AQ6ZU45 233 aa13.58□□□□□ -0.24
ATG4B-208ENST00000419606 SCN4BQ8IWT1 228 aa13.58□□□□□ -0.24
ATG4B-208ENST00000419606 LRRC8AQ8IWT6 810 aa13.58□□□□□ -0.24
ATG4B-208ENST00000419606 ANKRD52Q8NB46 1076 aa13.58□□□□□ -0.24
ATG4B-208ENST00000419606 C1orf131Q8NDD1 294 aaKnown RBP13.58□□□□□ -0.24
ATG4B-208ENST00000419606 SLC30A5Q8TAD4 765 aa13.58□□□□□ -0.24
ATG4B-208ENST00000419606 FEZF2Q8TBJ5 459 aa13.58□□□□□ -0.24
ATG4B-208ENST00000419606 GPR152Q8TDT2 470 aa13.58□□□□□ -0.24
ATG4B-208ENST00000419606 SLC22A17Q8WUG5 538 aa13.58□□□□□ -0.24
ATG4B-208ENST00000419606 SECISBP2LQ93073 1101 aaKnown RBP13.58□□□□□ -0.24
ATG4B-208ENST00000419606 DUSP16Q9BY84 665 aa13.58□□□□□ -0.24
ATG4B-208ENST00000419606 NHEJ1Q9H9Q4 299 aaPredicted RBP13.58□□□□□ -0.24
ATG4B-208ENST00000419606 CYP4F11Q9HBI6 524 aa13.58□□□□□ -0.24
ATG4B-208ENST00000419606 SPTLC3Q9NUV7 552 aa13.58□□□□□ -0.24
ATG4B-208ENST00000419606 SEPT11Q9NVA2 429 aaKnown RBP13.58□□□□□ -0.24
ATG4B-208ENST00000419606 TJP2Q9UDY2 1190 aa13.58□□□□□ -0.24
ATG4B-208ENST00000419606 AFF4Q9UHB7 1163 aaKnown RBP13.58□□□□□ -0.24
ATG4B-208ENST00000419606 MYO9BQ13459 2157 aa13.57□□□□□ -0.24
ATG4B-208ENST00000419606 TMCO5BA8MYB1 307 aa13.57□□□□□ -0.24
ATG4B-208ENST00000419606 F8VP50 259 aa13.57□□□□□ -0.24
ATG4B-208ENST00000419606 PIK3R2O00459 728 aa13.57□□□□□ -0.24
ATG4B-208ENST00000419606 CYP1A1P04798 512 aaPredicted RBP13.57□□□□□ -0.24
ATG4B-208ENST00000419606 PTMAP06454 111 aaKnown RBP13.57□□□□□ -0.24
ATG4B-208ENST00000419606 FAM200BP0CF97 657 aa13.57□□□□□ -0.24
ATG4B-208ENST00000419606 HAPLN1P10915 354 aaPredicted RBP13.57□□□□□ -0.24
ATG4B-208ENST00000419606 ATF2P15336 505 aa13.57□□□□□ -0.24
ATG4B-208ENST00000419606 GPD2P43304 727 aa13.57□□□□□ -0.24
ATG4B-208ENST00000419606 RGS7P49802 495 aa13.57□□□□□ -0.24
ATG4B-208ENST00000419606 CCZ1BP86790 482 aa13.57□□□□□ -0.24
ATG4B-208ENST00000419606 CCZ1P86791 482 aaPredicted RBP13.57□□□□□ -0.24
ATG4B-208ENST00000419606 CDK17Q00537 523 aa13.57□□□□□ -0.24
ATG4B-208ENST00000419606 GFPT1Q06210 699 aaPredicted RBP13.57□□□□□ -0.24
ATG4B-208ENST00000419606 MAPK8IP2Q13387 824 aaPredicted RBP13.57□□□□□ -0.24
ATG4B-208ENST00000419606 PTPROQ16827 1216 aa13.57□□□□□ -0.24
ATG4B-208ENST00000419606 CLEC16AQ2KHT3 1053 aa13.57□□□□□ -0.24
ATG4B-208ENST00000419606 CFAP221Q4G0U5 840 aa13.57□□□□□ -0.24
ATG4B-208ENST00000419606 C2CD6Q53TS8 623 aa13.57□□□□□ -0.24
ATG4B-208ENST00000419606 TCEAL5Q5H9L2 206 aa13.57□□□□□ -0.24
ATG4B-208ENST00000419606 NAA35Q5VZE5 725 aa13.57□□□□□ -0.24
ATG4B-208ENST00000419606 TPGS2Q68CL5 300 aa13.57□□□□□ -0.24
ATG4B-208ENST00000419606 PMF1Q6P1K2 205 aa13.57□□□□□ -0.24
ATG4B-208ENST00000419606 GPRIN1Q7Z2K8 1008 aa13.57□□□□□ -0.24
ATG4B-208ENST00000419606 ZNF677Q86XU0 584 aa13.57□□□□□ -0.24
ATG4B-208ENST00000419606 FMNL3Q8IVF7 1028 aa13.57□□□□□ -0.24
ATG4B-208ENST00000419606 VN1R2Q8NFZ6 395 aa13.57□□□□□ -0.24
ATG4B-208ENST00000419606 SPPL2BQ8TCT7 592 aa13.57□□□□□ -0.24
ATG4B-208ENST00000419606 CPA5Q8WXQ8 436 aa13.57□□□□□ -0.24
ATG4B-208ENST00000419606 SEPT5Q99719 369 aaPredicted RBP13.57□□□□□ -0.24
ATG4B-208ENST00000419606 BAG1Q99933 345 aaPredicted RBP13.57□□□□□ -0.24
ATG4B-208ENST00000419606 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.57□□□□□ -0.24
ATG4B-208ENST00000419606 DNAI2Q9GZS0 605 aa13.57□□□□□ -0.24
ATG4B-208ENST00000419606 PDCL3Q9H2J4 239 aa13.57□□□□□ -0.24
ATG4B-208ENST00000419606 KCNF1Q9H3M0 494 aa13.57□□□□□ -0.24
ATG4B-208ENST00000419606 IGFLR1Q9H665 355 aa13.57□□□□□ -0.24
ATG4B-208ENST00000419606 TLE6Q9H808 572 aa13.57□□□□□ -0.24
ATG4B-208ENST00000419606 HESX1Q9UBX0 185 aa13.57□□□□□ -0.24
ATG4B-208ENST00000419606 ADAMTS1Q9UHI8 967 aa13.57□□□□□ -0.24
ATG4B-208ENST00000419606 MTCH2Q9Y6C9 303 aa13.57□□□□□ -0.24
ATG4B-208ENST00000419606 BZW2Q9Y6E2 419 aaKnown RBP13.57□□□□□ -0.24
ATG4B-208ENST00000419606 PATJQ8NI35 1801 aa13.57□□□□□ -0.24
ATG4B-208ENST00000419606 MTCL1Q9Y4B5 1905 aaKnown RBP13.56□□□□□ -0.24
ATG4B-208ENST00000419606 HHLA1C9JL84 531 aa13.56□□□□□ -0.24
ATG4B-208ENST00000419606 ZNF263O14978 683 aa13.56□□□□□ -0.24
ATG4B-208ENST00000419606 LINC01565O15544 149 aa13.56□□□□□ -0.24
ATG4B-208ENST00000419606 GLUD1P00367 558 aa13.56□□□□□ -0.24
ATG4B-208ENST00000419606 UNGP13051 313 aaPredicted RBP13.56□□□□□ -0.24
ATG4B-208ENST00000419606 NPR3P17342 541 aa13.56□□□□□ -0.24
ATG4B-208ENST00000419606 ATF6P18850 670 aa13.56□□□□□ -0.24
ATG4B-208ENST00000419606 GRIK1P39086 918 aa13.56□□□□□ -0.24
ATG4B-208ENST00000419606 BCAT1P54687 386 aa13.56□□□□□ -0.24
ATG4B-208ENST00000419606 NOMO3P69849 1222 aa13.56□□□□□ -0.24
ATG4B-208ENST00000419606 BST2Q10589 180 aaKnown RBP13.56□□□□□ -0.24
ATG4B-208ENST00000419606 HYAL1Q12794 435 aa13.56□□□□□ -0.24
ATG4B-208ENST00000419606 MTMR3Q13615 1198 aa13.56□□□□□ -0.24
ATG4B-208ENST00000419606 STILQ15468 1287 aa13.56□□□□□ -0.24
ATG4B-208ENST00000419606 DUSP6Q16828 381 aa13.56□□□□□ -0.24
ATG4B-208ENST00000419606 MGAT5BQ3V5L5 792 aa13.56□□□□□ -0.24
ATG4B-208ENST00000419606 CYP26C1Q6V0L0 522 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms