RNA–Protein interactions for RNA: ENST00000419472.1

VPS13A-207, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 1 (best)

Gene VPS13A, Length 2,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-207ENST00000419472 RNASE9P60153 205 aaKnown RBP5.62□□□□□ -1.51
VPS13A-207ENST00000419472 PHF19Q5T6S3 580 aa5.62□□□□□ -1.51
VPS13A-207ENST00000419472 FAM20CQ8IXL6 584 aa5.62□□□□□ -1.51
VPS13A-207ENST00000419472 REEP2Q9BRK0 252 aa5.62□□□□□ -1.51
VPS13A-207ENST00000419472 GRPEL1Q9HAV7 217 aa5.62□□□□□ -1.51
VPS13A-207ENST00000419472 IL21RQ9HBE5 538 aa5.62□□□□□ -1.51
VPS13A-207ENST00000419472 TMEM8AQ9HCN3 771 aa5.62□□□□□ -1.51
VPS13A-207ENST00000419472 CALCOCO1Q9P1Z2 691 aa5.62□□□□□ -1.51
VPS13A-207ENST00000419472 PLAGL2Q9UPG8 496 aa5.62□□□□□ -1.51
VPS13A-207ENST00000419472 WASF3Q9UPY6 502 aa5.62□□□□□ -1.51
VPS13A-207ENST00000419472 NALCNQ8IZF0 1738 aa5.62□□□□□ -1.51
VPS13A-207ENST00000419472 SMG6Q86US8 1419 aaKnown RBP5.62□□□□□ -1.51
VPS13A-207ENST00000419472 ADGRL3Q9HAR2 1447 aa5.62□□□□□ -1.51
VPS13A-207ENST00000419472 PTMAP06454 111 aaKnown RBP5.61□□□□□ -1.51
VPS13A-207ENST00000419472 TXNP10599 105 aaKnown RBP5.61□□□□□ -1.51
VPS13A-207ENST00000419472 IL1R2P27930 398 aa5.61□□□□□ -1.51
VPS13A-207ENST00000419472 NOS3P29474 1203 aa5.61□□□□□ -1.51
VPS13A-207ENST00000419472 PIK3CGP48736 1102 aa5.61□□□□□ -1.51
VPS13A-207ENST00000419472 DLG4P78352 724 aa5.61□□□□□ -1.51
VPS13A-207ENST00000419472 LRMPQ12912 555 aa5.61□□□□□ -1.51
VPS13A-207ENST00000419472 PAOXQ6QHF9 649 aa5.61□□□□□ -1.51
VPS13A-207ENST00000419472 BBS12Q6ZW61 710 aa5.61□□□□□ -1.51
VPS13A-207ENST00000419472 KDELC2Q7Z4H8 507 aa5.61□□□□□ -1.51
VPS13A-207ENST00000419472 IQCA1Q86XH1 822 aa5.61□□□□□ -1.51
VPS13A-207ENST00000419472 TRIM48Q8IWZ4 208 aa5.61□□□□□ -1.51
VPS13A-207ENST00000419472 FBXL6Q8N531 539 aa5.61□□□□□ -1.51
VPS13A-207ENST00000419472 TMEM57Q8N5G2 664 aa5.61□□□□□ -1.51
VPS13A-207ENST00000419472 NAT8LQ8N9F0 302 aa5.61□□□□□ -1.51
VPS13A-207ENST00000419472 GIMAP7Q8NHV1 300 aa5.61□□□□□ -1.51
VPS13A-207ENST00000419472 STAMQ92783 540 aa5.61□□□□□ -1.51
VPS13A-207ENST00000419472 UHRF1Q96T88 793 aaPredicted RBP5.61□□□□□ -1.51
VPS13A-207ENST00000419472 EIF2AQ9BY44 585 aaKnown RBP5.61□□□□□ -1.51
VPS13A-207ENST00000419472 KIAA1683Q9H0B3 1180 aa5.61□□□□□ -1.51
VPS13A-207ENST00000419472 BRF2Q9HAW0 419 aa5.61□□□□□ -1.51
VPS13A-207ENST00000419472 DNAJC16Q9Y2G8 782 aa5.61□□□□□ -1.51
VPS13A-207ENST00000419472 NHSL1Q5SYE7 1610 aa5.61□□□□□ -1.51
VPS13A-207ENST00000419472 H0Y858 1186 aa5.61□□□□□ -1.51
VPS13A-207ENST00000419472 MAFO75444 373 aaPredicted RBP5.61□□□□□ -1.51
VPS13A-207ENST00000419472 FGFR4P22455 802 aa5.61□□□□□ -1.51
VPS13A-207ENST00000419472 AKT1P31749 480 aa5.61□□□□□ -1.51
VPS13A-207ENST00000419472 ATICP31939 592 aa5.61□□□□□ -1.51
VPS13A-207ENST00000419472 COPAP53621 1224 aa5.61□□□□□ -1.51
VPS13A-207ENST00000419472 SNRPNP63162 240 aaKnown RBP5.61□□□□□ -1.51
VPS13A-207ENST00000419472 KCNAB1Q14722 419 aa5.61□□□□□ -1.51
VPS13A-207ENST00000419472 WTAPQ15007 396 aa5.61□□□□□ -1.51
VPS13A-207ENST00000419472 MAPKAPK3Q16644 382 aa5.61□□□□□ -1.51
VPS13A-207ENST00000419472 CEP128Q6ZU80 1094 aa5.61□□□□□ -1.51
VPS13A-207ENST00000419472 SYT13Q7L8C5 426 aa5.61□□□□□ -1.51
VPS13A-207ENST00000419472 CEP97Q8IW35 865 aa5.61□□□□□ -1.51
VPS13A-207ENST00000419472 DNAJC5GQ8N7S2 189 aa5.61□□□□□ -1.51
VPS13A-207ENST00000419472 PANK2Q9BZ23 570 aa5.61□□□□□ -1.51
VPS13A-207ENST00000419472 TWSG1Q9GZX9 223 aa5.61□□□□□ -1.51
VPS13A-207ENST00000419472 NELFAQ9H3P2 528 aa5.61□□□□□ -1.51
VPS13A-207ENST00000419472 MANSC1Q9H8J5 431 aa5.61□□□□□ -1.51
VPS13A-207ENST00000419472 HEYLQ9NQ87 328 aaPredicted RBP5.61□□□□□ -1.51
VPS13A-207ENST00000419472 EIF2B3Q9NR50 452 aaKnown RBP5.61□□□□□ -1.51
VPS13A-207ENST00000419472 TLR9Q9NR96 1032 aa5.61□□□□□ -1.51
VPS13A-207ENST00000419472 ACTL7AQ9Y615 435 aa5.61□□□□□ -1.51
VPS13A-207ENST00000419472 SHPRHQ149N8 1683 aa5.61□□□□□ -1.51
VPS13A-207ENST00000419472 PTPRUQ92729 1446 aa5.61□□□□□ -1.51
VPS13A-207ENST00000419472 A0A1W2PQ27 194 aa5.61□□□□□ -1.51
VPS13A-207ENST00000419472 A0A1W2PQ64 194 aa5.61□□□□□ -1.51
VPS13A-207ENST00000419472 A0A1W2PQC6 194 aa5.61□□□□□ -1.51
VPS13A-207ENST00000419472 A0A1W2PQD8 194 aa5.61□□□□□ -1.51
VPS13A-207ENST00000419472 A0A1W2PR48 441 aa5.61□□□□□ -1.51
VPS13A-207ENST00000419472 H3BM21 787 aa5.61□□□□□ -1.51
VPS13A-207ENST00000419472 GPR32O75388 356 aa5.61□□□□□ -1.51
VPS13A-207ENST00000419472 HSP90AB1P08238 724 aaKnown RBP5.61□□□□□ -1.51
VPS13A-207ENST00000419472 GLI4P10075 376 aa5.61□□□□□ -1.51
VPS13A-207ENST00000419472 ENDOUP21128 410 aaKnown RBP5.61□□□□□ -1.51
VPS13A-207ENST00000419472 PIK3CAP42336 1068 aa5.61□□□□□ -1.51
VPS13A-207ENST00000419472 SLC11A2P49281 568 aa5.61□□□□□ -1.51
VPS13A-207ENST00000419472 MRE11P49959 708 aa5.61□□□□□ -1.51
VPS13A-207ENST00000419472 TRIM28Q13263 835 aaKnown RBP5.61□□□□□ -1.51
VPS13A-207ENST00000419472 PDCLQ13371 301 aa5.61□□□□□ -1.51
VPS13A-207ENST00000419472 EIF4A2Q14240 407 aaKnown RBP5.61□□□□□ -1.51
VPS13A-207ENST00000419472 PKN2Q16513 984 aaKnown RBP5.61□□□□□ -1.51
VPS13A-207ENST00000419472 EMC10Q5UCC4 262 aa5.61□□□□□ -1.51
VPS13A-207ENST00000419472 SRBD1Q8N5C6 995 aaKnown RBP5.61□□□□□ -1.51
VPS13A-207ENST00000419472 TTLL11Q8NHH1 800 aa5.61□□□□□ -1.51
VPS13A-207ENST00000419472 NSUN4Q96CB9 384 aaKnown RBP5.61□□□□□ -1.51
VPS13A-207ENST00000419472 TBC1D31Q96DN5 1066 aa5.61□□□□□ -1.51
VPS13A-207ENST00000419472 ADPGKQ9BRR6 497 aa5.61□□□□□ -1.51
VPS13A-207ENST00000419472 YY1AP1Q9H869 796 aa5.61□□□□□ -1.51
VPS13A-207ENST00000419472 KCMF1Q9P0J7 381 aa5.61□□□□□ -1.51
VPS13A-207ENST00000419472 PSAT1Q9Y617 370 aa5.61□□□□□ -1.51
VPS13A-207ENST00000419472 ADGRB2O60241 1585 aa5.61□□□□□ -1.51
VPS13A-207ENST00000419472 PHLPP1O60346 1717 aa5.6□□□□□ -1.51
VPS13A-207ENST00000419472 GTPBP10A4D1E9 387 aaKnown RBP5.6□□□□□ -1.51
VPS13A-207ENST00000419472 DYNC1I1O14576 645 aa5.6□□□□□ -1.51
VPS13A-207ENST00000419472 ACADMP11310 421 aa5.6□□□□□ -1.51
VPS13A-207ENST00000419472 IL11P20809 199 aa5.6□□□□□ -1.51
VPS13A-207ENST00000419472 UCP3P55916 312 aa5.6□□□□□ -1.51
VPS13A-207ENST00000419472 MC1RQ01726 317 aa5.6□□□□□ -1.51
VPS13A-207ENST00000419472 CREB5Q02930 508 aa5.6□□□□□ -1.51
VPS13A-207ENST00000419472 RAB32Q13637 225 aa5.6□□□□□ -1.51
VPS13A-207ENST00000419472 KAZNQ674X7 775 aa5.6□□□□□ -1.51
VPS13A-207ENST00000419472 THAP5Q7Z6K1 395 aa5.6□□□□□ -1.51
VPS13A-207ENST00000419472 PXKQ7Z7A4 578 aa5.6□□□□□ -1.51
VPS13A-207ENST00000419472 CPLX4Q7Z7G2 160 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms