RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 CCT6BQ92526 530 aa13.61□□□□□ -0.23
LINC00642-201ENST00000419459 KREMEN1Q96MU8 473 aa13.61□□□□□ -0.23
LINC00642-201ENST00000419459 CASD1Q96PB1 797 aa13.61□□□□□ -0.23
LINC00642-201ENST00000419459 IMPG2Q9BZV3 1241 aa13.61□□□□□ -0.23
LINC00642-201ENST00000419459 ITGA11Q9UKX5 1188 aa13.61□□□□□ -0.23
LINC00642-201ENST00000419459 DERAQ9Y315 318 aa13.61□□□□□ -0.23
LINC00642-201ENST00000419459 TBKBP1A7MCY6 615 aa13.61□□□□□ -0.23
LINC00642-201ENST00000419459 SPTLC1O15269 473 aa13.61□□□□□ -0.23
LINC00642-201ENST00000419459 ZC3H11AO75152 810 aaKnown RBP eCLIP13.61□□□□□ -0.23
LINC00642-201ENST00000419459 FGBP02675 491 aa13.61□□□□□ -0.23
LINC00642-201ENST00000419459 PFKMP08237 780 aa13.61□□□□□ -0.23
LINC00642-201ENST00000419459 RAP1GAPP47736 663 aa13.61□□□□□ -0.23
LINC00642-201ENST00000419459 GRIK3Q13003 919 aa13.61□□□□□ -0.23
LINC00642-201ENST00000419459 NT5DC4Q86YG4 428 aa13.61□□□□□ -0.23
LINC00642-201ENST00000419459 NPAS4Q8IUM7 802 aa13.61□□□□□ -0.23
LINC00642-201ENST00000419459 TOP1MTQ969P6 601 aa13.61□□□□□ -0.23
LINC00642-201ENST00000419459 HPDLQ96IR7 371 aa13.61□□□□□ -0.23
LINC00642-201ENST00000419459 RSRC1Q96IZ7 334 aaKnown RBP13.61□□□□□ -0.23
LINC00642-201ENST00000419459 NT5C1BQ96P26 610 aa13.61□□□□□ -0.23
LINC00642-201ENST00000419459 LBHD1Q9BQE6 289 aaPredicted RBP13.61□□□□□ -0.23
LINC00642-201ENST00000419459 ELAC1Q9H777 363 aaKnown RBP13.61□□□□□ -0.23
LINC00642-201ENST00000419459 UBN1Q9NPG3 1134 aa13.61□□□□□ -0.23
LINC00642-201ENST00000419459 ACP6Q9NPH0 428 aa13.61□□□□□ -0.23
LINC00642-201ENST00000419459 HAUS2Q9NVX0 235 aa13.61□□□□□ -0.23
LINC00642-201ENST00000419459 DNAJC12Q9UKB3 198 aa13.61□□□□□ -0.23
LINC00642-201ENST00000419459 I3L4J1 428 aa13.6□□□□□ -0.23
LINC00642-201ENST00000419459 WEE2P0C1S8 567 aa13.6□□□□□ -0.23
LINC00642-201ENST00000419459 CDH8P55286 799 aa13.6□□□□□ -0.23
LINC00642-201ENST00000419459 RPS6KA1Q15418 735 aa13.6□□□□□ -0.23
LINC00642-201ENST00000419459 UAP1Q16222 522 aaPredicted RBP13.6□□□□□ -0.23
LINC00642-201ENST00000419459 WDR44Q5JSH3 913 aa13.6□□□□□ -0.23
LINC00642-201ENST00000419459 ANKS4BQ8N8V4 417 aa13.6□□□□□ -0.23
LINC00642-201ENST00000419459 RAPGEF5Q92565 580 aa13.6□□□□□ -0.23
LINC00642-201ENST00000419459 GPR88Q9GZN0 384 aa13.6□□□□□ -0.23
LINC00642-201ENST00000419459 SLITRK6Q9H5Y7 841 aa13.6□□□□□ -0.23
LINC00642-201ENST00000419459 PRG3Q9Y2Y8 225 aaPredicted RBP13.6□□□□□ -0.23
LINC00642-201ENST00000419459 UNC80Q8N2C7 3258 aa13.6□□□□□ -0.23
LINC00642-201ENST00000419459 FAM170AA1A519 330 aa13.59□□□□□ -0.23
LINC00642-201ENST00000419459 CFAP73A6NFT4 308 aa13.59□□□□□ -0.23
LINC00642-201ENST00000419459 NT5C1B-RDH14C9J2C7 533 aa13.59□□□□□ -0.23
LINC00642-201ENST00000419459 PIRO00625 290 aa13.59□□□□□ -0.23
LINC00642-201ENST00000419459 DGKIO75912 1065 aa13.59□□□□□ -0.23
LINC00642-201ENST00000419459 B3GAT3O94766 335 aa13.59□□□□□ -0.23
LINC00642-201ENST00000419459 CALCAP01258 141 aa13.59□□□□□ -0.23
LINC00642-201ENST00000419459 CD58P19256 250 aa13.59□□□□□ -0.23
LINC00642-201ENST00000419459 CLNS1AP54105 237 aaKnown RBP13.59□□□□□ -0.23
LINC00642-201ENST00000419459 IRX1P78414 480 aaPredicted RBP13.59□□□□□ -0.23
LINC00642-201ENST00000419459 ITIH4Q14624 930 aa13.59□□□□□ -0.23
LINC00642-201ENST00000419459 UPP1Q16831 310 aa13.59□□□□□ -0.23
LINC00642-201ENST00000419459 SGSM1Q2NKQ1 1148 aa13.59□□□□□ -0.23
LINC00642-201ENST00000419459 ODF2Q5BJF6 829 aa13.59□□□□□ -0.23
LINC00642-201ENST00000419459 C9orf50Q5SZB4 431 aa13.59□□□□□ -0.23
LINC00642-201ENST00000419459 URGCPQ8TCY9 931 aa13.59□□□□□ -0.23
LINC00642-201ENST00000419459 SEC14L1Q92503 715 aa13.59□□□□□ -0.23
LINC00642-201ENST00000419459 FAXDC2Q96IV6 333 aa13.59□□□□□ -0.23
LINC00642-201ENST00000419459 SMYD3Q9H7B4 428 aa13.59□□□□□ -0.23
LINC00642-201ENST00000419459 SPTBN5Q9NRC6 3674 aaKnown RBP13.59□□□□□ -0.23
LINC00642-201ENST00000419459 SLC38A7Q9NVC3 462 aa13.59□□□□□ -0.23
LINC00642-201ENST00000419459 SNX9Q9Y5X1 595 aa13.59□□□□□ -0.23
LINC00642-201ENST00000419459 PODXLO00592 558 aa13.59□□□□□ -0.23
LINC00642-201ENST00000419459 XPOTO43592 962 aaKnown RBP13.59□□□□□ -0.23
LINC00642-201ENST00000419459 CAPN15O75808 1086 aa13.59□□□□□ -0.23
LINC00642-201ENST00000419459 KIF4AO95239 1232 aa13.59□□□□□ -0.23
LINC00642-201ENST00000419459 AMHP03971 560 aa13.59□□□□□ -0.23
LINC00642-201ENST00000419459 ANXA13P27216 316 aa13.59□□□□□ -0.23
LINC00642-201ENST00000419459 MAGEA10P43363 369 aaPredicted RBP13.59□□□□□ -0.23
LINC00642-201ENST00000419459 ASPAP45381 313 aa13.59□□□□□ -0.23
LINC00642-201ENST00000419459 LILRA4P59901 499 aa13.59□□□□□ -0.23
LINC00642-201ENST00000419459 RBP5P82980 135 aa13.59□□□□□ -0.23
LINC00642-201ENST00000419459 ORC1Q13415 861 aa13.59□□□□□ -0.23
LINC00642-201ENST00000419459 TUSC3Q13454 348 aa13.59□□□□□ -0.23
LINC00642-201ENST00000419459 BYSLQ13895 437 aaKnown RBP13.59□□□□□ -0.23
LINC00642-201ENST00000419459 DRAP1Q14919 205 aaPredicted RBP13.59□□□□□ -0.23
LINC00642-201ENST00000419459 ZNF394Q53GI3 561 aa13.59□□□□□ -0.23
LINC00642-201ENST00000419459 CPLX4Q7Z7G2 160 aa13.59□□□□□ -0.23
LINC00642-201ENST00000419459 TMEM173Q86WV6 379 aaPredicted RBP13.59□□□□□ -0.23
LINC00642-201ENST00000419459 CHMP6Q96FZ7 201 aa13.59□□□□□ -0.23
LINC00642-201ENST00000419459 SPAG5Q96R06 1193 aa13.59□□□□□ -0.23
LINC00642-201ENST00000419459 AIPL1Q9NZN9 384 aa13.59□□□□□ -0.23
LINC00642-201ENST00000419459 GBF1Q92538 1859 aa13.59□□□□□ -0.23
LINC00642-201ENST00000419459 F8VZ95 297 aa13.58□□□□□ -0.24
LINC00642-201ENST00000419459 PGRMC1O00264 195 aaKnown RBP13.58□□□□□ -0.24
LINC00642-201ENST00000419459 RTN2O75298 545 aa13.58□□□□□ -0.24
LINC00642-201ENST00000419459 BAIAP3O94812 1187 aa13.58□□□□□ -0.24
LINC00642-201ENST00000419459 ATP6V1G2O95670 118 aa13.58□□□□□ -0.24
LINC00642-201ENST00000419459 FTCDO95954 541 aa13.58□□□□□ -0.24
LINC00642-201ENST00000419459 DRD4P21917 467 aa13.58□□□□□ -0.24
LINC00642-201ENST00000419459 OR1G1P47890 313 aa13.58□□□□□ -0.24
LINC00642-201ENST00000419459 DSC1Q08554 894 aa13.58□□□□□ -0.24
LINC00642-201ENST00000419459 CUL2Q13617 745 aa13.58□□□□□ -0.24
LINC00642-201ENST00000419459 ZKSCAN8Q15776 578 aaPredicted RBP13.58□□□□□ -0.24
LINC00642-201ENST00000419459 QPCTQ16769 361 aa13.58□□□□□ -0.24
LINC00642-201ENST00000419459 ZNF667Q5HYK9 610 aa13.58□□□□□ -0.24
LINC00642-201ENST00000419459 PSRC1Q6PGN9 363 aaPredicted RBP13.58□□□□□ -0.24
LINC00642-201ENST00000419459 CROCCP2Q86T23 111 aa13.58□□□□□ -0.24
LINC00642-201ENST00000419459 HOOK3Q86VS8 718 aa13.58□□□□□ -0.24
LINC00642-201ENST00000419459 CCDC197Q8NCU1 140 aa13.58□□□□□ -0.24
LINC00642-201ENST00000419459 NRDE2Q9H7Z3 1164 aa13.58□□□□□ -0.24
LINC00642-201ENST00000419459 EBF2Q9HAK2 575 aa13.58□□□□□ -0.24
LINC00642-201ENST00000419459 FAM114A2Q9NRY5 505 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms