RNA–Protein interactions for RNA: ENST00000419169.5

SMG7-204, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 2

Gene SMG7, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-204ENST00000419169 VPS11Q9H270 941 aa18.3■□□□□ 0.52
SMG7-204ENST00000419169 TLE6Q9H808 572 aa18.3■□□□□ 0.52
SMG7-204ENST00000419169 STK32BQ9NY57 414 aa18.3■□□□□ 0.52
SMG7-204ENST00000419169 KANSL3Q9P2N6 904 aa18.3■□□□□ 0.52
SMG7-204ENST00000419169 PHIPQ8WWQ0 1821 aa18.29■□□□□ 0.52
SMG7-204ENST00000419169 KRT3P12035 628 aa18.29■□□□□ 0.52
SMG7-204ENST00000419169 KCNA3P22001 575 aa18.29■□□□□ 0.52
SMG7-204ENST00000419169 OVGP1Q12889 678 aa18.29■□□□□ 0.52
SMG7-204ENST00000419169 GRM1Q13255 1194 aa18.29■□□□□ 0.52
SMG7-204ENST00000419169 SGSM1Q2NKQ1 1148 aa18.29■□□□□ 0.52
SMG7-204ENST00000419169 BBS9Q3SYG4 887 aa18.29■□□□□ 0.52
SMG7-204ENST00000419169 PTPN20Q4JDL3 420 aa18.29■□□□□ 0.52
SMG7-204ENST00000419169 SCARA5Q6ZMJ2 495 aa18.29■□□□□ 0.52
SMG7-204ENST00000419169 JOSD2Q8TAC2 188 aa18.29■□□□□ 0.52
SMG7-204ENST00000419169 NIFKQ9BYG3 293 aaKnown RBP18.29■□□□□ 0.52
SMG7-204ENST00000419169 MANSC1Q9H8J5 431 aa18.29■□□□□ 0.52
SMG7-204ENST00000419169 TJP2Q9UDY2 1190 aa18.29■□□□□ 0.52
SMG7-204ENST00000419169 LRRC42Q9Y546 428 aa18.29■□□□□ 0.52
SMG7-204ENST00000419169 LUC7L3O95232 432 aaKnown RBP18.29■□□□□ 0.52
SMG7-204ENST00000419169 KDELR1P24390 212 aa18.29■□□□□ 0.52
SMG7-204ENST00000419169 HMGCS2P54868 508 aa18.29■□□□□ 0.52
SMG7-204ENST00000419169 DENND1BQ6P3S1 775 aa18.29■□□□□ 0.52
SMG7-204ENST00000419169 ZPBP2Q6X784 338 aa18.29■□□□□ 0.52
SMG7-204ENST00000419169 SAMD7Q7Z3H4 446 aa18.29■□□□□ 0.52
SMG7-204ENST00000419169 KIAA0319LQ8IZA0 1049 aa18.29■□□□□ 0.52
SMG7-204ENST00000419169 PDIK1LQ8N165 341 aa18.29■□□□□ 0.52
SMG7-204ENST00000419169 PTPRN2Q92932 1015 aa18.29■□□□□ 0.52
SMG7-204ENST00000419169 TCHPQ9BT92 498 aa18.29■□□□□ 0.52
SMG7-204ENST00000419169 DENND2DQ9H6A0 471 aaPredicted RBP18.29■□□□□ 0.52
SMG7-204ENST00000419169 ACAD9Q9H845 621 aa18.29■□□□□ 0.52
SMG7-204ENST00000419169 XPO7Q9UIA9 1087 aaKnown RBP18.29■□□□□ 0.52
SMG7-204ENST00000419169 ADAMTS5Q9UNA0 930 aa18.29■□□□□ 0.52
SMG7-204ENST00000419169 RPL26L1Q9UNX3 145 aaKnown RBP18.29■□□□□ 0.52
SMG7-204ENST00000419169 SIGLEC16A6NMB1 481 aa18.28■□□□□ 0.52
SMG7-204ENST00000419169 LIN7AO14910 233 aaPredicted RBP18.28■□□□□ 0.52
SMG7-204ENST00000419169 HNRNPCL1O60812 293 aaKnown RBP18.28■□□□□ 0.52
SMG7-204ENST00000419169 SKAP2O75563 359 aaPredicted RBP18.28■□□□□ 0.52
SMG7-204ENST00000419169 SMNDC1O75940 238 aaKnown RBP eCLIP18.28■□□□□ 0.52
SMG7-204ENST00000419169 CD48P09326 243 aa18.28■□□□□ 0.52
SMG7-204ENST00000419169 BLMHQ13867 455 aa18.28■□□□□ 0.52
SMG7-204ENST00000419169 TAZQ16635 292 aa18.28■□□□□ 0.52
SMG7-204ENST00000419169 CIAPIN1Q6FI81 312 aa18.28■□□□□ 0.52
SMG7-204ENST00000419169 UNC45BQ8IWX7 931 aa18.28■□□□□ 0.52
SMG7-204ENST00000419169 THNSL1Q8IYQ7 743 aa18.28■□□□□ 0.52
SMG7-204ENST00000419169 PEX10O60683 326 aa18.28■□□□□ 0.52
SMG7-204ENST00000419169 ENTPD5O75356 428 aa18.28■□□□□ 0.52
SMG7-204ENST00000419169 MARK3P27448 753 aa18.28■□□□□ 0.52
SMG7-204ENST00000419169 ABL2P42684 1182 aa18.28■□□□□ 0.52
SMG7-204ENST00000419169 TRPC3Q13507 836 aa18.28■□□□□ 0.52
SMG7-204ENST00000419169 HADHQ16836 314 aaKnown RBP18.28■□□□□ 0.52
SMG7-204ENST00000419169 DUOXA2Q1HG44 320 aa18.28■□□□□ 0.52
SMG7-204ENST00000419169 TTC8Q8TAM2 541 aa18.28■□□□□ 0.52
SMG7-204ENST00000419169 MIPEPQ99797 713 aa18.28■□□□□ 0.52
SMG7-204ENST00000419169 CYTH4Q9UIA0 394 aa18.28■□□□□ 0.52
SMG7-204ENST00000419169 A0A0G2JND7 137 aa18.27■□□□□ 0.52
SMG7-204ENST00000419169 TOM1L1O75674 476 aa18.27■□□□□ 0.52
SMG7-204ENST00000419169 ITGBL1O95965 494 aaPredicted RBP18.27■□□□□ 0.52
SMG7-204ENST00000419169 POLR2BP30876 1174 aaKnown RBP18.27■□□□□ 0.52
SMG7-204ENST00000419169 RFC5P40937 340 aa18.27■□□□□ 0.52
SMG7-204ENST00000419169 ASPAP45381 313 aa18.27■□□□□ 0.52
SMG7-204ENST00000419169 ZNF699Q32M78 642 aa18.27■□□□□ 0.52
SMG7-204ENST00000419169 SH3TC2Q8TF17 1288 aa18.27■□□□□ 0.52
SMG7-204ENST00000419169 FNIP1Q8TF40 1166 aa18.27■□□□□ 0.52
SMG7-204ENST00000419169 CAMKK2Q96RR4 588 aa18.27■□□□□ 0.52
SMG7-204ENST00000419169 TEX13BQ9BXU2 312 aa18.27■□□□□ 0.52
SMG7-204ENST00000419169 TRIM55Q9BYV6 548 aa18.27■□□□□ 0.52
SMG7-204ENST00000419169 ALG13Q9NP73 1137 aaKnown RBP18.27■□□□□ 0.52
SMG7-204ENST00000419169 H0Y3Z8 333 aa18.27■□□□□ 0.51
SMG7-204ENST00000419169 SMAPO00193 183 aa18.27■□□□□ 0.51
SMG7-204ENST00000419169 MSCO60682 206 aa18.27■□□□□ 0.51
SMG7-204ENST00000419169 NEBLO76041 1014 aa18.27■□□□□ 0.51
SMG7-204ENST00000419169 BASP1P80723 227 aaKnown RBP18.27■□□□□ 0.51
SMG7-204ENST00000419169 FAM71DQ8N9W8 422 aa18.27■□□□□ 0.51
SMG7-204ENST00000419169 ZNF280CQ8ND82 737 aa18.27■□□□□ 0.51
SMG7-204ENST00000419169 MICAL1Q8TDZ2 1067 aa18.27■□□□□ 0.51
SMG7-204ENST00000419169 CYTH2Q99418 400 aa18.27■□□□□ 0.51
SMG7-204ENST00000419169 FAM167BQ9BTA0 163 aa18.27■□□□□ 0.51
SMG7-204ENST00000419169 VPS33BQ9H267 617 aa18.27■□□□□ 0.51
SMG7-204ENST00000419169 CHMP2BQ9UQN3 213 aa18.27■□□□□ 0.51
SMG7-204ENST00000419169 IGKV6D-21A0A0A0MT36 114 aa18.26■□□□□ 0.51
SMG7-204ENST00000419169 LPXNO60711 386 aa18.26■□□□□ 0.51
SMG7-204ENST00000419169 TSHRP16473 764 aa18.26■□□□□ 0.51
SMG7-204ENST00000419169 ICAM3P32942 547 aa18.26■□□□□ 0.51
SMG7-204ENST00000419169 YWHAEP62258 255 aaKnown RBP18.26■□□□□ 0.51
SMG7-204ENST00000419169 TARBP2Q15633 366 aaKnown RBP18.26■□□□□ 0.51
SMG7-204ENST00000419169 STXBP2Q15833 593 aa18.26■□□□□ 0.51
SMG7-204ENST00000419169 LRRC6Q86X45 466 aa18.26■□□□□ 0.51
SMG7-204ENST00000419169 RFX6Q8HWS3 928 aa18.26■□□□□ 0.51
SMG7-204ENST00000419169 EMC1Q8N766 993 aa18.26■□□□□ 0.51
SMG7-204ENST00000419169 SPDL1Q96EA4 605 aa18.26■□□□□ 0.51
SMG7-204ENST00000419169 TSSK1BQ9BXA7 367 aa18.26■□□□□ 0.51
SMG7-204ENST00000419169 MRPL4Q9BYD3 311 aaKnown RBP18.26■□□□□ 0.51
SMG7-204ENST00000419169 DOCK1Q14185 1865 aa18.26■□□□□ 0.51
SMG7-204ENST00000419169 LCTP09848 1927 aa18.26■□□□□ 0.51
SMG7-204ENST00000419169 MT-ND3P03897 115 aa18.26■□□□□ 0.51
SMG7-204ENST00000419169 CD19P15391 556 aa18.26■□□□□ 0.51
SMG7-204ENST00000419169 EIF3EP60228 445 aaKnown RBP18.26■□□□□ 0.51
SMG7-204ENST00000419169 PSMC1P62191 440 aaKnown RBP18.26■□□□□ 0.51
SMG7-204ENST00000419169 TFAMQ00059 246 aaKnown RBP18.26■□□□□ 0.51
SMG7-204ENST00000419169 IGDCC3Q8IVU1 814 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms