RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 WDFY4Q6ZS81 3184 aa17.56■□□□□ 0.4
LINC00404-201ENST00000418660 NCAM2O15394 837 aa17.56■□□□□ 0.4
LINC00404-201ENST00000418660 TARSP26639 723 aaKnown RBP17.56■□□□□ 0.4
LINC00404-201ENST00000418660 ANXA13P27216 316 aa17.56■□□□□ 0.4
LINC00404-201ENST00000418660 AVPR1AP37288 418 aa17.56■□□□□ 0.4
LINC00404-201ENST00000418660 MAGEA9P43362 315 aa17.56■□□□□ 0.4
LINC00404-201ENST00000418660 COBLL1Q53SF7 1204 aa17.56■□□□□ 0.4
LINC00404-201ENST00000418660 ZNF658Q5TYW1 1059 aaPredicted RBP17.56■□□□□ 0.4
LINC00404-201ENST00000418660 TXNDC8Q6A555 127 aa17.56■□□□□ 0.4
LINC00404-201ENST00000418660 B3GALNT2Q8NCR0 500 aa17.56■□□□□ 0.4
LINC00404-201ENST00000418660 SPATA20Q8TB22 786 aa17.56■□□□□ 0.4
LINC00404-201ENST00000418660 CLDN23Q96B33 292 aa17.56■□□□□ 0.4
LINC00404-201ENST00000418660 C8orf48Q96LL4 319 aa17.56■□□□□ 0.4
LINC00404-201ENST00000418660 GTPBP4Q9BZE4 634 aaKnown RBP17.56■□□□□ 0.4
LINC00404-201ENST00000418660 SMG9Q9H0W8 520 aaKnown RBP17.56■□□□□ 0.4
LINC00404-201ENST00000418660 DPEP3Q9H4B8 488 aa17.56■□□□□ 0.4
LINC00404-201ENST00000418660 CIZ1Q9ULV3 898 aaPredicted RBP17.56■□□□□ 0.4
LINC00404-201ENST00000418660 PCDHA5Q9Y5H7 936 aa17.56■□□□□ 0.4
LINC00404-201ENST00000418660 PIAS3Q9Y6X2 628 aa17.56■□□□□ 0.4
LINC00404-201ENST00000418660 NUP210Q8TEM1 1887 aaPredicted RBP17.56■□□□□ 0.4
LINC00404-201ENST00000418660 COL4A2P08572 1712 aa17.55■□□□□ 0.4
LINC00404-201ENST00000418660 PROB1E7EW31 1015 aa17.55■□□□□ 0.4
LINC00404-201ENST00000418660 TRIM66O15016 1216 aa17.55■□□□□ 0.4
LINC00404-201ENST00000418660 TADA3O75528 432 aa17.55■□□□□ 0.4
LINC00404-201ENST00000418660 ASS1P00966 412 aaKnown RBP17.55■□□□□ 0.4
LINC00404-201ENST00000418660 HLA-DRAP01903 254 aa17.55■□□□□ 0.4
LINC00404-201ENST00000418660 NBL1P41271 181 aa17.55■□□□□ 0.4
LINC00404-201ENST00000418660 PIK3CAP42336 1068 aa17.55■□□□□ 0.4
LINC00404-201ENST00000418660 PRCPP42785 496 aa17.55■□□□□ 0.4
LINC00404-201ENST00000418660 RAP1GAPP47736 663 aa17.55■□□□□ 0.4
LINC00404-201ENST00000418660 MCCD1P59942 119 aaPredicted RBP17.55■□□□□ 0.4
LINC00404-201ENST00000418660 PLCB2Q00722 1185 aa17.55■□□□□ 0.4
LINC00404-201ENST00000418660 C1orf210Q8IVY1 113 aa17.55■□□□□ 0.4
LINC00404-201ENST00000418660 ELOA2Q8IYF1 753 aaPredicted RBP17.55■□□□□ 0.4
LINC00404-201ENST00000418660 SMARCE1Q969G3 411 aa17.55■□□□□ 0.4
LINC00404-201ENST00000418660 ELMO3Q96BJ8 720 aa17.55■□□□□ 0.4
LINC00404-201ENST00000418660 MSANTD3Q96H12 275 aa17.55■□□□□ 0.4
LINC00404-201ENST00000418660 TNIP3Q96KP6 325 aa17.55■□□□□ 0.4
LINC00404-201ENST00000418660 B3GNT5Q9BYG0 378 aa17.55■□□□□ 0.4
LINC00404-201ENST00000418660 ELOVL4Q9GZR5 314 aa17.55■□□□□ 0.4
LINC00404-201ENST00000418660 SDCBP2Q9H190 292 aa17.55■□□□□ 0.4
LINC00404-201ENST00000418660 C8orf33Q9H7E9 229 aaPredicted RBP17.55■□□□□ 0.4
LINC00404-201ENST00000418660 KIF9Q9HAQ2 790 aa17.55■□□□□ 0.4
LINC00404-201ENST00000418660 TDP1Q9NUW8 608 aa17.55■□□□□ 0.4
LINC00404-201ENST00000418660 THG1LQ9NWX6 298 aaKnown RBP17.55■□□□□ 0.4
LINC00404-201ENST00000418660 EHD2Q9NZN4 543 aa17.55■□□□□ 0.4
LINC00404-201ENST00000418660 CETN3O15182 167 aa17.54■□□□□ 0.4
LINC00404-201ENST00000418660 TRIM49P0CI25 452 aa17.54■□□□□ 0.4
LINC00404-201ENST00000418660 TRIM49CP0CI26 452 aa17.54■□□□□ 0.4
LINC00404-201ENST00000418660 RPS9P46781 194 aaKnown RBP17.54■□□□□ 0.4
LINC00404-201ENST00000418660 GCLMP48507 274 aa17.54■□□□□ 0.4
LINC00404-201ENST00000418660 PPP3CAQ08209 521 aa17.54■□□□□ 0.4
LINC00404-201ENST00000418660 FZD5Q13467 585 aa17.54■□□□□ 0.4
LINC00404-201ENST00000418660 ZNF268Q14587 947 aaPredicted RBP17.54■□□□□ 0.4
LINC00404-201ENST00000418660 C1orf228Q6PIY5 440 aa17.54■□□□□ 0.4
LINC00404-201ENST00000418660 SCARA5Q6ZMJ2 495 aa17.54■□□□□ 0.4
LINC00404-201ENST00000418660 DENND5BQ6ZUT9 1274 aa17.54■□□□□ 0.4
LINC00404-201ENST00000418660 ZNF687Q8N1G0 1237 aa17.54■□□□□ 0.4
LINC00404-201ENST00000418660 FAM3CQ92520 227 aa17.54■□□□□ 0.4
LINC00404-201ENST00000418660 USP13Q92995 863 aaPredicted RBP17.54■□□□□ 0.4
LINC00404-201ENST00000418660 ZFYVE19Q96K21 471 aa17.54■□□□□ 0.4
LINC00404-201ENST00000418660 F8VP50 259 aa17.53■□□□□ 0.4
LINC00404-201ENST00000418660 CLDN5O00501 218 aa17.53■□□□□ 0.4
LINC00404-201ENST00000418660 GTF2H1P32780 548 aa17.53■□□□□ 0.4
LINC00404-201ENST00000418660 KPNA1P52294 538 aaPredicted RBP17.53■□□□□ 0.4
LINC00404-201ENST00000418660 NOP14P78316 857 aaKnown RBP17.53■□□□□ 0.4
LINC00404-201ENST00000418660 SPOPLQ6IQ16 392 aa17.53■□□□□ 0.4
LINC00404-201ENST00000418660 TAS1R2Q8TE23 839 aa17.53■□□□□ 0.4
LINC00404-201ENST00000418660 ERCC4Q92889 916 aaPredicted RBP17.53■□□□□ 0.4
LINC00404-201ENST00000418660 TSG101Q99816 390 aa17.53■□□□□ 0.4
LINC00404-201ENST00000418660 TTLL2Q9BWV7 592 aa17.53■□□□□ 0.4
LINC00404-201ENST00000418660 IMPG2Q9BZV3 1241 aa17.53■□□□□ 0.4
LINC00404-201ENST00000418660 ZNF518BQ9C0D4 1074 aa17.53■□□□□ 0.4
LINC00404-201ENST00000418660 TMEM8AQ9HCN3 771 aa17.53■□□□□ 0.4
LINC00404-201ENST00000418660 NDRG2Q9UN36 371 aaKnown RBP17.53■□□□□ 0.4
LINC00404-201ENST00000418660 CCL26Q9Y258 94 aa17.53■□□□□ 0.4
LINC00404-201ENST00000418660 TICRRQ7Z2Z1 1910 aa17.53■□□□□ 0.4
LINC00404-201ENST00000418660 ATP8B3O60423 1300 aa17.52■□□□□ 0.4
LINC00404-201ENST00000418660 TRAV19A0A0A6YYK7 116 aa17.52■□□□□ 0.4
LINC00404-201ENST00000418660 KINO60870 393 aaKnown RBP17.52■□□□□ 0.4
LINC00404-201ENST00000418660 USP17L7P0C7H9 530 aa17.52■□□□□ 0.4
LINC00404-201ENST00000418660 CCNE1P24864 410 aa17.52■□□□□ 0.4
LINC00404-201ENST00000418660 ASPAP45381 313 aa17.52■□□□□ 0.4
LINC00404-201ENST00000418660 CACNA2D1P54289 1103 aa17.52■□□□□ 0.4
LINC00404-201ENST00000418660 USP46P62068 366 aa17.52■□□□□ 0.4
LINC00404-201ENST00000418660 UNC93AQ86WB7 457 aa17.52■□□□□ 0.4
LINC00404-201ENST00000418660 ADSSL1Q8N142 457 aa17.52■□□□□ 0.4
LINC00404-201ENST00000418660 CRYBG2Q8N1P7 616 aa17.52■□□□□ 0.4
LINC00404-201ENST00000418660 EEF2KMTQ96G04 330 aa17.52■□□□□ 0.4
LINC00404-201ENST00000418660 MMRN2Q9H8L6 949 aa17.52■□□□□ 0.4
LINC00404-201ENST00000418660 TRPC7Q9HCX4 862 aa17.52■□□□□ 0.4
LINC00404-201ENST00000418660 GKN1Q9NS71 199 aa17.52■□□□□ 0.4
LINC00404-201ENST00000418660 TMEM30AQ9NV96 361 aa17.52■□□□□ 0.4
LINC00404-201ENST00000418660 SPATA6Q9NWH7 488 aaPredicted RBP17.52■□□□□ 0.4
LINC00404-201ENST00000418660 GTSE1Q9NYZ3 720 aa17.52■□□□□ 0.4
LINC00404-201ENST00000418660 GCNT4Q9P109 453 aa17.52■□□□□ 0.4
LINC00404-201ENST00000418660 MIA3Q5JRA6 1907 aa17.51■□□□□ 0.39
LINC00404-201ENST00000418660 DENND4CQ5VZ89 1909 aa17.51■□□□□ 0.39
LINC00404-201ENST00000418660 CACNA1HO95180 2353 aa17.51■□□□□ 0.39
LINC00404-201ENST00000418660 LAMTOR5O43504 91 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms