RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 CASTOR2A6NHX0 329 aa11.64□□□□□ -0.55
PTCH1-205ENST00000418258 PCYT1AP49585 367 aa11.64□□□□□ -0.55
PTCH1-205ENST00000418258 ANXA11P50995 505 aaKnown RBP11.64□□□□□ -0.55
PTCH1-205ENST00000418258 ERO1BQ86YB8 467 aa11.64□□□□□ -0.55
PTCH1-205ENST00000418258 VPS28Q9UK41 221 aa11.64□□□□□ -0.55
PTCH1-205ENST00000418258 MICAL3Q7RTP6 2002 aa11.64□□□□□ -0.55
PTCH1-205ENST00000418258 ZBTB39O15060 712 aa11.64□□□□□ -0.55
PTCH1-205ENST00000418258 GALNTL6Q49A17 601 aa11.64□□□□□ -0.55
PTCH1-205ENST00000418258 RIT2Q99578 217 aa11.64□□□□□ -0.55
PTCH1-205ENST00000418258 UBQLN1Q9UMX0 589 aaKnown RBP11.64□□□□□ -0.55
PTCH1-205ENST00000418258 ITIH2P19823 946 aa11.64□□□□□ -0.55
PTCH1-205ENST00000418258 ACOT1Q86TX2 421 aa11.64□□□□□ -0.55
PTCH1-205ENST00000418258 EME1Q96AY2 570 aa11.64□□□□□ -0.55
PTCH1-205ENST00000418258 ZNF669Q96BR6 464 aaPredicted RBP11.64□□□□□ -0.55
PTCH1-205ENST00000418258 UBXN6Q9BZV1 441 aa11.64□□□□□ -0.55
PTCH1-205ENST00000418258 GGT7Q9UJ14 662 aa11.64□□□□□ -0.55
PTCH1-205ENST00000418258 ADGRG1Q9Y653 693 aa11.64□□□□□ -0.55
PTCH1-205ENST00000418258 KIF20BQ96Q89 1820 aa11.64□□□□□ -0.55
PTCH1-205ENST00000418258 RPL10AP62906 217 aaKnown RBP11.64□□□□□ -0.55
PTCH1-205ENST00000418258 EFEMP1Q12805 493 aa11.64□□□□□ -0.55
PTCH1-205ENST00000418258 OTOAQ7RTW8 1153 aa11.64□□□□□ -0.55
PTCH1-205ENST00000418258 ZNF677Q86XU0 584 aa11.64□□□□□ -0.55
PTCH1-205ENST00000418258 MMGT1Q8N4V1 131 aa11.64□□□□□ -0.55
PTCH1-205ENST00000418258 IGDCC4Q8TDY8 1250 aa11.64□□□□□ -0.55
PTCH1-205ENST00000418258 JMJD4Q9H9V9 463 aa11.64□□□□□ -0.55
PTCH1-205ENST00000418258 MBD5Q9P267 1494 aa11.64□□□□□ -0.55
PTCH1-205ENST00000418258 RIMS1Q86UR5 1692 aaKnown RBP11.64□□□□□ -0.55
PTCH1-205ENST00000418258 PSMD12O00232 456 aaPredicted RBP11.64□□□□□ -0.55
PTCH1-205ENST00000418258 ZW10O43264 779 aa11.64□□□□□ -0.55
PTCH1-205ENST00000418258 CAPN15O75808 1086 aa11.64□□□□□ -0.55
PTCH1-205ENST00000418258 DGKIO75912 1065 aa11.64□□□□□ -0.55
PTCH1-205ENST00000418258 ZNF484Q5JVG2 852 aa11.64□□□□□ -0.55
PTCH1-205ENST00000418258 TRIM69Q86WT6 500 aa11.64□□□□□ -0.55
PTCH1-205ENST00000418258 C4orf33Q8N1A6 199 aa11.64□□□□□ -0.55
PTCH1-205ENST00000418258 KAT2BQ92831 832 aa11.64□□□□□ -0.55
PTCH1-205ENST00000418258 ACSF2Q96CM8 615 aaPredicted RBP11.64□□□□□ -0.55
PTCH1-205ENST00000418258 CHP1Q99653 195 aa11.64□□□□□ -0.55
PTCH1-205ENST00000418258 DPYDQ12882 1025 aa11.64□□□□□ -0.55
PTCH1-205ENST00000418258 EPC2Q52LR7 807 aa11.64□□□□□ -0.55
PTCH1-205ENST00000418258 MROH9Q5TGP6 573 aa11.64□□□□□ -0.55
PTCH1-205ENST00000418258 AGAP9Q5VTM2 703 aa11.64□□□□□ -0.55
PTCH1-205ENST00000418258 TIGD7Q6NT04 549 aaPredicted RBP11.64□□□□□ -0.55
PTCH1-205ENST00000418258 CMTM5Q96DZ9 223 aa11.64□□□□□ -0.55
PTCH1-205ENST00000418258 ADGRE3Q9BY15 652 aa11.64□□□□□ -0.55
PTCH1-205ENST00000418258 RPS6KB2Q9UBS0 482 aa11.64□□□□□ -0.55
PTCH1-205ENST00000418258 EIF4E1BA6NMX2 242 aaKnown RBP11.63□□□□□ -0.55
PTCH1-205ENST00000418258 CAND2O75155 1236 aa11.63□□□□□ -0.55
PTCH1-205ENST00000418258 SERAC1Q96JX3 654 aa11.63□□□□□ -0.55
PTCH1-205ENST00000418258 TRPM5Q9NZQ8 1165 aa11.63□□□□□ -0.55
PTCH1-205ENST00000418258 MPP6Q9NZW5 540 aa11.63□□□□□ -0.55
PTCH1-205ENST00000418258 COPG1Q9Y678 874 aaKnown RBP11.63□□□□□ -0.55
PTCH1-205ENST00000418258 ANKRD65E5RJM6 399 aa11.63□□□□□ -0.55
PTCH1-205ENST00000418258 STRNO43815 780 aa11.63□□□□□ -0.55
PTCH1-205ENST00000418258 FGFR1P11362 822 aa11.63□□□□□ -0.55
PTCH1-205ENST00000418258 SERPINB4P48594 390 aa11.63□□□□□ -0.55
PTCH1-205ENST00000418258 TRIP4Q15650 581 aaPredicted RBP11.63□□□□□ -0.55
PTCH1-205ENST00000418258 FUT11Q495W5 492 aa11.63□□□□□ -0.55
PTCH1-205ENST00000418258 FGD2Q7Z6J4 655 aa11.63□□□□□ -0.55
PTCH1-205ENST00000418258 UNC45BQ8IWX7 931 aa11.63□□□□□ -0.55
PTCH1-205ENST00000418258 MED8Q96G25 268 aa11.63□□□□□ -0.55
PTCH1-205ENST00000418258 DDX28Q9NUL7 540 aaKnown RBP11.63□□□□□ -0.55
PTCH1-205ENST00000418258 RGL2O15211 777 aa11.63□□□□□ -0.55
PTCH1-205ENST00000418258 VPS26AO75436 327 aa11.63□□□□□ -0.55
PTCH1-205ENST00000418258 PLIN5Q00G26 463 aa11.63□□□□□ -0.55
PTCH1-205ENST00000418258 C16orf72Q14CZ0 275 aa11.63□□□□□ -0.55
PTCH1-205ENST00000418258 FAM136AQ96C01 138 aa11.63□□□□□ -0.55
PTCH1-205ENST00000418258 TRIM51Q9BSJ1 452 aa11.63□□□□□ -0.55
PTCH1-205ENST00000418258 FBXO10Q9UK96 956 aa11.63□□□□□ -0.55
PTCH1-205ENST00000418258 IFRD1O00458 451 aaPredicted RBP11.63□□□□□ -0.55
PTCH1-205ENST00000418258 BACE1P56817 501 aa11.63□□□□□ -0.55
PTCH1-205ENST00000418258 CACHD1Q5VU97 1274 aa11.63□□□□□ -0.55
PTCH1-205ENST00000418258 MRNIPQ6NTE8 343 aa11.63□□□□□ -0.55
PTCH1-205ENST00000418258 CCDC60Q8IWA6 550 aaPredicted RBP11.63□□□□□ -0.55
PTCH1-205ENST00000418258 CNPY4Q8N129 248 aa11.63□□□□□ -0.55
PTCH1-205ENST00000418258 VPS50Q96JG6 964 aa11.63□□□□□ -0.55
PTCH1-205ENST00000418258 DMAP1Q9NPF5 467 aaPredicted RBP11.63□□□□□ -0.55
PTCH1-205ENST00000418258 IMPAD1Q9NX62 359 aa11.63□□□□□ -0.55
PTCH1-205ENST00000418258 AAR2Q9Y312 384 aaKnown RBP11.63□□□□□ -0.55
PTCH1-205ENST00000418258 RASA1P20936 1047 aa11.63□□□□□ -0.55
PTCH1-205ENST00000418258 IGFBP4P22692 258 aa11.63□□□□□ -0.55
PTCH1-205ENST00000418258 E2F4Q16254 413 aa11.63□□□□□ -0.55
PTCH1-205ENST00000418258 PGS1Q32NB8 556 aa11.63□□□□□ -0.55
PTCH1-205ENST00000418258 LAYNQ6UX15 382 aa11.63□□□□□ -0.55
PTCH1-205ENST00000418258 RD3Q7Z3Z2 195 aa11.63□□□□□ -0.55
PTCH1-205ENST00000418258 FBXO28Q9NVF7 368 aa11.63□□□□□ -0.55
PTCH1-205ENST00000418258 PADI4Q9UM07 663 aa11.63□□□□□ -0.55
PTCH1-205ENST00000418258 DYRK1BQ9Y463 629 aa11.63□□□□□ -0.55
PTCH1-205ENST00000418258 CDY2AQ9Y6F7 541 aa11.63□□□□□ -0.55
PTCH1-205ENST00000418258 CDY1Q9Y6F8 540 aa11.63□□□□□ -0.55
PTCH1-205ENST00000418258 SGCGQ13326 291 aa11.63□□□□□ -0.55
PTCH1-205ENST00000418258 CUL2Q13617 745 aa11.63□□□□□ -0.55
PTCH1-205ENST00000418258 C4orf22Q6V702 233 aa11.63□□□□□ -0.55
PTCH1-205ENST00000418258 DENND5BQ6ZUT9 1274 aa11.63□□□□□ -0.55
PTCH1-205ENST00000418258 THTPAQ9BU02 230 aa11.63□□□□□ -0.55
PTCH1-205ENST00000418258 THUMPD3Q9BV44 507 aaKnown RBP11.63□□□□□ -0.55
PTCH1-205ENST00000418258 CLPBQ9H078 707 aa11.63□□□□□ -0.55
PTCH1-205ENST00000418258 SENP2Q9HC62 589 aa11.63□□□□□ -0.55
PTCH1-205ENST00000418258 TLR8Q9NR97 1041 aaKnown RBP11.63□□□□□ -0.55
PTCH1-205ENST00000418258 AGPAT5Q9NUQ2 364 aa11.63□□□□□ -0.55
PTCH1-205ENST00000418258 GRID1Q9ULK0 1009 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms