RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 ADGRD2Q7Z7M1 963 aa8.97□□□□□ -0.97
TRIM48-201ENST00000417545 PASD1Q8IV76 773 aa8.97□□□□□ -0.97
TRIM48-201ENST00000417545 SLC7A14Q8TBB6 771 aa8.97□□□□□ -0.97
TRIM48-201ENST00000417545 IPO4Q8TEX9 1081 aaKnown RBP8.97□□□□□ -0.97
TRIM48-201ENST00000417545 WHAMMQ8TF30 809 aa8.97□□□□□ -0.97
TRIM48-201ENST00000417545 ZNF606Q8WXB4 792 aa8.97□□□□□ -0.97
TRIM48-201ENST00000417545 MYLIPQ8WY64 445 aa8.97□□□□□ -0.97
TRIM48-201ENST00000417545 SYN2Q92777 582 aaPredicted RBP8.97□□□□□ -0.97
TRIM48-201ENST00000417545 AGPAT1Q99943 283 aa8.97□□□□□ -0.97
TRIM48-201ENST00000417545 LPIN3Q9BQK8 851 aa8.97□□□□□ -0.97
TRIM48-201ENST00000417545 B3GNT5Q9BYG0 378 aa8.97□□□□□ -0.97
TRIM48-201ENST00000417545 ZNF518BQ9C0D4 1074 aa8.97□□□□□ -0.97
TRIM48-201ENST00000417545 GPR88Q9GZN0 384 aa8.97□□□□□ -0.97
TRIM48-201ENST00000417545 PIDD1Q9HB75 910 aa8.97□□□□□ -0.97
TRIM48-201ENST00000417545 ABCB6Q9NP58 842 aa8.97□□□□□ -0.97
TRIM48-201ENST00000417545 DMAP1Q9NPF5 467 aaPredicted RBP8.97□□□□□ -0.97
TRIM48-201ENST00000417545 MAN1C1Q9NR34 630 aa8.97□□□□□ -0.97
TRIM48-201ENST00000417545 ST7Q9NRC1 585 aa8.97□□□□□ -0.97
TRIM48-201ENST00000417545 DZANK1Q9NVP4 752 aa8.97□□□□□ -0.97
TRIM48-201ENST00000417545 MAFFQ9ULX9 164 aa8.97□□□□□ -0.97
TRIM48-201ENST00000417545 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.97□□□□□ -0.97
TRIM48-201ENST00000417545 CNTN6Q9UQ52 1028 aa8.97□□□□□ -0.97
TRIM48-201ENST00000417545 SLC27A5Q9Y2P5 690 aa8.97□□□□□ -0.97
TRIM48-201ENST00000417545 MYO16Q9Y6X6 1858 aa8.96□□□□□ -0.97
TRIM48-201ENST00000417545 MTCL1Q9Y4B5 1905 aaKnown RBP8.96□□□□□ -0.98
TRIM48-201ENST00000417545 O00370 1275 aa8.96□□□□□ -0.98
TRIM48-201ENST00000417545 NCK2O43639 380 aa8.96□□□□□ -0.98
TRIM48-201ENST00000417545 AKR1B10O60218 316 aa8.96□□□□□ -0.98
TRIM48-201ENST00000417545 TBC1D4O60343 1298 aa8.96□□□□□ -0.98
TRIM48-201ENST00000417545 XYLBO75191 536 aa8.96□□□□□ -0.98
TRIM48-201ENST00000417545 MICAL2O94851 1124 aa8.96□□□□□ -0.98
TRIM48-201ENST00000417545 C8AP07357 584 aa8.96□□□□□ -0.98
TRIM48-201ENST00000417545 MMEP08473 750 aa8.96□□□□□ -0.98
TRIM48-201ENST00000417545 SKILP12757 684 aa8.96□□□□□ -0.98
TRIM48-201ENST00000417545 NPR3P17342 541 aa8.96□□□□□ -0.98
TRIM48-201ENST00000417545 CYP2F1P24903 491 aa8.96□□□□□ -0.98
TRIM48-201ENST00000417545 CLCN4P51793 760 aa8.96□□□□□ -0.98
TRIM48-201ENST00000417545 EPHB3P54753 998 aa8.96□□□□□ -0.98
TRIM48-201ENST00000417545 MAP3K7CLP57077 242 aa8.96□□□□□ -0.98
TRIM48-201ENST00000417545 CDR2Q01850 454 aa8.96□□□□□ -0.98
TRIM48-201ENST00000417545 CCDC173Q0VFZ6 552 aa8.96□□□□□ -0.98
TRIM48-201ENST00000417545 TBX2Q13207 712 aaPredicted RBP8.96□□□□□ -0.98
TRIM48-201ENST00000417545 CAMK1Q14012 370 aa8.96□□□□□ -0.98
TRIM48-201ENST00000417545 CNGA2Q16280 664 aa8.96□□□□□ -0.98
TRIM48-201ENST00000417545 DUSP6Q16828 381 aa8.96□□□□□ -0.98
TRIM48-201ENST00000417545 CCDC142Q17RM4 750 aa8.96□□□□□ -0.98
TRIM48-201ENST00000417545 CFAP221Q4G0U5 840 aa8.96□□□□□ -0.98
TRIM48-201ENST00000417545 DPY19L2P1Q6NXN4 242 aa8.96□□□□□ -0.98
TRIM48-201ENST00000417545 PPP1R2P3Q6NXS1 205 aa8.96□□□□□ -0.98
TRIM48-201ENST00000417545 FAM171BQ6P995 826 aa8.96□□□□□ -0.98
TRIM48-201ENST00000417545 LCLAT1Q6UWP7 414 aa8.96□□□□□ -0.98
TRIM48-201ENST00000417545 Q7L0L9 218 aa8.96□□□□□ -0.98
TRIM48-201ENST00000417545 NOP9Q86U38 636 aaKnown RBP8.96□□□□□ -0.98
TRIM48-201ENST00000417545 ITIH5Q86UX2 942 aa8.96□□□□□ -0.98
TRIM48-201ENST00000417545 LRRTM3Q86VH5 581 aa8.96□□□□□ -0.98
TRIM48-201ENST00000417545 SIX6OS1Q8N1H7 587 aa8.96□□□□□ -0.98
TRIM48-201ENST00000417545 ATAD1Q8NBU5 361 aa8.96□□□□□ -0.98
TRIM48-201ENST00000417545 TMEM35BQ8NCS4 154 aa8.96□□□□□ -0.98
TRIM48-201ENST00000417545 UBA3Q8TBC4 463 aa8.96□□□□□ -0.98
TRIM48-201ENST00000417545 EPS8L1Q8TE68 723 aa8.96□□□□□ -0.98
TRIM48-201ENST00000417545 PPM1EQ8WY54 764 aa8.96□□□□□ -0.98
TRIM48-201ENST00000417545 CCDC42Q96M95 316 aa8.96□□□□□ -0.98
TRIM48-201ENST00000417545 GCNAQ96QF7 691 aa8.96□□□□□ -0.98
TRIM48-201ENST00000417545 HNRNPABQ99729 332 aaKnown RBP8.96□□□□□ -0.98
TRIM48-201ENST00000417545 RHOBTB2Q9BYZ6 727 aa8.96□□□□□ -0.98
TRIM48-201ENST00000417545 MIS12Q9H081 205 aa8.96□□□□□ -0.98
TRIM48-201ENST00000417545 PLEKHA4Q9H4M7 779 aa8.96□□□□□ -0.98
TRIM48-201ENST00000417545 HAUS4Q9H6D7 363 aa8.96□□□□□ -0.98
TRIM48-201ENST00000417545 LRRC4Q9HBW1 653 aa8.96□□□□□ -0.98
TRIM48-201ENST00000417545 ACP6Q9NPH0 428 aa8.96□□□□□ -0.98
TRIM48-201ENST00000417545 LUC7LQ9NQ29 371 aaKnown RBP8.96□□□□□ -0.98
TRIM48-201ENST00000417545 TMLHEQ9NVH6 421 aa8.96□□□□□ -0.98
TRIM48-201ENST00000417545 CLDND1Q9NY35 253 aa8.96□□□□□ -0.98
TRIM48-201ENST00000417545 EHD2Q9NZN4 543 aa8.96□□□□□ -0.98
TRIM48-201ENST00000417545 AIPL1Q9NZN9 384 aa8.96□□□□□ -0.98
TRIM48-201ENST00000417545 FBXW11Q9UKB1 542 aa8.96□□□□□ -0.98
TRIM48-201ENST00000417545 MAGED2Q9UNF1 606 aaPredicted RBP8.96□□□□□ -0.98
TRIM48-201ENST00000417545 YIPF1Q9Y548 306 aa8.96□□□□□ -0.98
TRIM48-201ENST00000417545 NME7Q9Y5B8 376 aa8.96□□□□□ -0.98
TRIM48-201ENST00000417545 INSL5Q9Y5Q6 135 aa8.96□□□□□ -0.98
TRIM48-201ENST00000417545 PTPRDP23468 1912 aa8.95□□□□□ -0.98
TRIM48-201ENST00000417545 F8VP50 259 aa8.95□□□□□ -0.98
TRIM48-201ENST00000417545 MAP3K13O43283 966 aa8.95□□□□□ -0.98
TRIM48-201ENST00000417545 LILRB3O75022 631 aa8.95□□□□□ -0.98
TRIM48-201ENST00000417545 ABLIM3O94929 683 aa8.95□□□□□ -0.98
TRIM48-201ENST00000417545 LSM8O95777 96 aaKnown RBP8.95□□□□□ -0.98
TRIM48-201ENST00000417545 HAPLN1P10915 354 aaPredicted RBP8.95□□□□□ -0.98
TRIM48-201ENST00000417545 EPCAMP16422 314 aa8.95□□□□□ -0.98
TRIM48-201ENST00000417545 CYLC1P35663 651 aaPredicted RBP8.95□□□□□ -0.98
TRIM48-201ENST00000417545 MAGEA11P43364 429 aa8.95□□□□□ -0.98
TRIM48-201ENST00000417545 NSFP46459 744 aaKnown RBP8.95□□□□□ -0.98
TRIM48-201ENST00000417545 TWF1Q12792 350 aa8.95□□□□□ -0.98
TRIM48-201ENST00000417545 CCDC85BQ15834 202 aaPredicted RBP8.95□□□□□ -0.98
TRIM48-201ENST00000417545 DDR2Q16832 855 aa8.95□□□□□ -0.98
TRIM48-201ENST00000417545 CYP26C1Q6V0L0 522 aa8.95□□□□□ -0.98
TRIM48-201ENST00000417545 CCDC186Q7Z3E2 898 aa8.95□□□□□ -0.98
TRIM48-201ENST00000417545 TCEAL8Q8IYN2 117 aa8.95□□□□□ -0.98
TRIM48-201ENST00000417545 FUKQ8N0W3 1084 aa8.95□□□□□ -0.98
TRIM48-201ENST00000417545 ANKRD52Q8NB46 1076 aa8.95□□□□□ -0.98
TRIM48-201ENST00000417545 C1orf131Q8NDD1 294 aaKnown RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms