RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 EHD2Q9NZN4 543 aa27.07■■□□□ 1.92
VEGFA-208ENST00000417285 FANCMQ8IYD8 2048 aa27.07■■□□□ 1.92
VEGFA-208ENST00000417285 TICRRQ7Z2Z1 1910 aa27.06■■□□□ 1.92
VEGFA-208ENST00000417285 HCRTO43612 131 aa27.06■■□□□ 1.92
VEGFA-208ENST00000417285 TDGF1P13385 188 aa27.06■■□□□ 1.92
VEGFA-208ENST00000417285 GRIK1P39086 918 aa27.06■■□□□ 1.92
VEGFA-208ENST00000417285 TNNC1P63316 161 aa27.06■■□□□ 1.92
VEGFA-208ENST00000417285 FOXK2Q01167 660 aa27.06■■□□□ 1.92
VEGFA-208ENST00000417285 TNK2Q07912 1038 aa27.06■■□□□ 1.92
VEGFA-208ENST00000417285 RUNX3Q13761 415 aa27.06■■□□□ 1.92
VEGFA-208ENST00000417285 KMT5BQ4FZB7 885 aa27.06■■□□□ 1.92
VEGFA-208ENST00000417285 TXNDC11Q6PKC3 985 aa27.06■■□□□ 1.92
VEGFA-208ENST00000417285 ZNF516Q92618 1163 aa27.06■■□□□ 1.92
VEGFA-208ENST00000417285 SECISBP2LQ93073 1101 aaKnown RBP27.06■■□□□ 1.92
VEGFA-208ENST00000417285 SYAP1Q96A49 352 aaPredicted RBP27.06■■□□□ 1.92
VEGFA-208ENST00000417285 CRTAC1Q9NQ79 661 aa27.06■■□□□ 1.92
VEGFA-208ENST00000417285 CCL26Q9Y258 94 aa27.06■■□□□ 1.92
VEGFA-208ENST00000417285 COL4A2P08572 1712 aa27.05■■□□□ 1.92
VEGFA-208ENST00000417285 PHACTR2O75167 634 aa27.05■■□□□ 1.92
VEGFA-208ENST00000417285 USP17L7P0C7H9 530 aa27.05■■□□□ 1.92
VEGFA-208ENST00000417285 PSMC1P62191 440 aaKnown RBP27.05■■□□□ 1.92
VEGFA-208ENST00000417285 STK4Q13043 487 aa27.05■■□□□ 1.92
VEGFA-208ENST00000417285 BECN1Q14457 450 aa27.05■■□□□ 1.92
VEGFA-208ENST00000417285 PDGFRLQ15198 375 aa27.05■■□□□ 1.92
VEGFA-208ENST00000417285 SLC9A9Q8IVB4 645 aa27.05■■□□□ 1.92
VEGFA-208ENST00000417285 GPR161Q8N6U8 529 aaKnown RBP27.05■■□□□ 1.92
VEGFA-208ENST00000417285 STKLD1Q8NE28 680 aa27.05■■□□□ 1.92
VEGFA-208ENST00000417285 OR6B3Q8NGW1 331 aa27.05■■□□□ 1.92
VEGFA-208ENST00000417285 MYLPFQ96A32 169 aa27.05■■□□□ 1.92
VEGFA-208ENST00000417285 PATJQ8NI35 1801 aa27.04■■□□□ 1.92
VEGFA-208ENST00000417285 TRAV19A0A0A6YYK7 116 aa27.04■■□□□ 1.92
VEGFA-208ENST00000417285 FAM237AA0A1B0GTK4 181 aa27.04■■□□□ 1.92
VEGFA-208ENST00000417285 PAPSS2O95340 614 aaPredicted RBP27.04■■□□□ 1.92
VEGFA-208ENST00000417285 BDNFP23560 247 aa27.04■■□□□ 1.92
VEGFA-208ENST00000417285 ANXA13P27216 316 aa27.04■■□□□ 1.92
VEGFA-208ENST00000417285 ID4P47928 161 aa27.04■■□□□ 1.92
VEGFA-208ENST00000417285 PDE6CP51160 858 aa27.04■■□□□ 1.92
VEGFA-208ENST00000417285 CYP27A1Q02318 531 aa27.04■■□□□ 1.92
VEGFA-208ENST00000417285 FAM160A1Q05DH4 1040 aa27.04■■□□□ 1.92
VEGFA-208ENST00000417285 PON2Q15165 354 aa27.04■■□□□ 1.92
VEGFA-208ENST00000417285 CCDC142Q17RM4 750 aa27.04■■□□□ 1.92
VEGFA-208ENST00000417285 KIAA2013Q8IYS2 634 aa27.04■■□□□ 1.92
VEGFA-208ENST00000417285 KIAA0895Q8NCT3 520 aa27.04■■□□□ 1.92
VEGFA-208ENST00000417285 MRPL45Q9BRJ2 306 aaKnown RBP27.04■■□□□ 1.92
VEGFA-208ENST00000417285 NCDNQ9UBB6 729 aa27.04■■□□□ 1.92
VEGFA-208ENST00000417285 NUP210Q8TEM1 1887 aaPredicted RBP27.04■■□□□ 1.92
VEGFA-208ENST00000417285 TRIM66O15016 1216 aa27.03■■□□□ 1.92
VEGFA-208ENST00000417285 PFKLP17858 780 aa27.03■■□□□ 1.92
VEGFA-208ENST00000417285 NDUFA8P51970 172 aa27.03■■□□□ 1.92
VEGFA-208ENST00000417285 CLDN10P78369 228 aa27.03■■□□□ 1.92
VEGFA-208ENST00000417285 CCINQ13939 588 aa27.03■■□□□ 1.92
VEGFA-208ENST00000417285 GAS6Q14393 721 aa27.03■■□□□ 1.92
VEGFA-208ENST00000417285 CCDC47Q96A33 483 aaKnown RBP27.03■■□□□ 1.92
VEGFA-208ENST00000417285 EXOC4Q96A65 974 aa27.03■■□□□ 1.92
VEGFA-208ENST00000417285 PCED1BQ96HM7 432 aa27.03■■□□□ 1.92
VEGFA-208ENST00000417285 GZF1Q9H116 711 aaPredicted RBP27.03■■□□□ 1.92
VEGFA-208ENST00000417285 TRPC7Q9HCX4 862 aa27.03■■□□□ 1.92
VEGFA-208ENST00000417285 RBM12Q9NTZ6 932 aaKnown RBP27.03■■□□□ 1.92
VEGFA-208ENST00000417285 DMAC2Q9NW81 257 aa27.03■■□□□ 1.92
VEGFA-208ENST00000417285 A0A1W2PQ27 194 aa27.02■■□□□ 1.92
VEGFA-208ENST00000417285 A0A1W2PQ64 194 aa27.02■■□□□ 1.92
VEGFA-208ENST00000417285 A0A1W2PQD8 194 aa27.02■■□□□ 1.92
VEGFA-208ENST00000417285 PDXKO00764 312 aa27.02■■□□□ 1.92
VEGFA-208ENST00000417285 TADA3O75528 432 aa27.02■■□□□ 1.92
VEGFA-208ENST00000417285 CKMP06732 381 aa27.02■■□□□ 1.92
VEGFA-208ENST00000417285 PTPN1P18031 435 aaKnown RBP27.02■■□□□ 1.92
VEGFA-208ENST00000417285 PPP3CCP48454 512 aa27.02■■□□□ 1.92
VEGFA-208ENST00000417285 MYL6P60660 151 aa27.02■■□□□ 1.92
VEGFA-208ENST00000417285 SATB1Q01826 763 aa27.02■■□□□ 1.92
VEGFA-208ENST00000417285 GRSF1Q12849 480 aaKnown RBP eCLIP27.02■■□□□ 1.92
VEGFA-208ENST00000417285 DENND5BQ6ZUT9 1274 aa27.02■■□□□ 1.92
VEGFA-208ENST00000417285 DCLK2Q8N568 766 aa27.02■■□□□ 1.92
VEGFA-208ENST00000417285 PARD3BQ8TEW8 1205 aa27.02■■□□□ 1.92
VEGFA-208ENST00000417285 C8orf48Q96LL4 319 aa27.02■■□□□ 1.92
VEGFA-208ENST00000417285 CYP2S1Q96SQ9 504 aa27.02■■□□□ 1.92
VEGFA-208ENST00000417285 EBF3Q9H4W6 596 aa27.02■■□□□ 1.92
VEGFA-208ENST00000417285 VRTNQ9H8Y1 702 aa27.02■■□□□ 1.92
VEGFA-208ENST00000417285 HPS4Q9NQG7 708 aa27.02■■□□□ 1.92
VEGFA-208ENST00000417285 TRDMT1O14717 391 aaKnown RBP27.01■■□□□ 1.91
VEGFA-208ENST00000417285 RPN1P04843 607 aaKnown RBP27.01■■□□□ 1.91
VEGFA-208ENST00000417285 HDCP19113 662 aa27.01■■□□□ 1.91
VEGFA-208ENST00000417285 MDH1BQ5I0G3 518 aa27.01■■□□□ 1.91
VEGFA-208ENST00000417285 XYLT2Q9H1B5 865 aa27.01■■□□□ 1.91
VEGFA-208ENST00000417285 TRPM5Q9NZQ8 1165 aa27.01■■□□□ 1.91
VEGFA-208ENST00000417285 NXF1Q9UBU9 619 aaKnown RBP27.01■■□□□ 1.91
VEGFA-208ENST00000417285 SMG5Q9UPR3 1016 aaKnown RBP27.01■■□□□ 1.91
VEGFA-208ENST00000417285 DMXL1Q9Y485 3027 aa27.01■■□□□ 1.91
VEGFA-208ENST00000417285 A8MXQ7 604 aa27■■□□□ 1.91
VEGFA-208ENST00000417285 KIF20AO95235 890 aa27■■□□□ 1.91
VEGFA-208ENST00000417285 HOXA6P31267 233 aa27■■□□□ 1.91
VEGFA-208ENST00000417285 CNR2P34972 360 aa27■■□□□ 1.91
VEGFA-208ENST00000417285 NOP14P78316 857 aaKnown RBP27■■□□□ 1.91
VEGFA-208ENST00000417285 BIRC3Q13489 604 aa27■■□□□ 1.91
VEGFA-208ENST00000417285 KCNB1Q14721 858 aa27■■□□□ 1.91
VEGFA-208ENST00000417285 MTF1Q14872 753 aa27■■□□□ 1.91
VEGFA-208ENST00000417285 TMEM196Q5HYL7 178 aa27■■□□□ 1.91
VEGFA-208ENST00000417285 WDR44Q5JSH3 913 aa27■■□□□ 1.91
VEGFA-208ENST00000417285 ERMP1Q7Z2K6 904 aa27■■□□□ 1.91
VEGFA-208ENST00000417285 TTLL2Q9BWV7 592 aa27■■□□□ 1.91
VEGFA-208ENST00000417285 ELOVL4Q9GZR5 314 aa27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms