RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 SH3GL2Q99962 352 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 WNT10AQ9GZT5 417 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 TWSG1Q9GZX9 223 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 PABPC3Q9H361 631 aaKnown RBP3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 ABHD16BQ9H3Z7 469 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 OPA3Q9H6K4 179 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 MRPL44Q9H9J2 332 aaKnown RBP3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 MKNK2Q9HBH9 465 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 VEZTQ9HBM0 779 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 SARS2Q9NP81 518 aaKnown RBP3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 SLC35D1Q9NTN3 355 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 LMBRD1Q9NUN5 540 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 INTS13Q9NVM9 706 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 PLA2G3Q9NZ20 509 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 CPNE7Q9UBL6 633 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 ZC3H7BQ9UGR2 993 aaKnown RBP3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 RCOR1Q9UKL0 485 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 FBXL21Q9UKT6 434 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 TBC1D30Q9Y2I9 924 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 POMT1Q9Y6A1 747 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 PIAS3Q9Y6X2 628 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 ATP8B3O60423 1300 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 RNF123Q5XPI4 1314 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 NSD2O96028 1365 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 RUSC2Q8N2Y8 1516 aa3.33□□□□□ -1.88
CTDSPL-203ENST00000416688 A0A1B0GTH6 734 aa3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 A0A1W2PQ09 198 aa3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 A0A1W2PRV1 198 aa3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 ARHGEF37A1IGU5 675 aa3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 A8MV72 311 aaPredicted RBP3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 MYO1GB0I1T2 1018 aa3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 SPATA31C2B4DYI2 1134 aa3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 E7EVH7 732 aa3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 NRG2O14511 850 aaPredicted RBP3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 CD3EAPO15446 510 aaKnown RBP3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 PRPF4O43172 522 aaKnown RBP eCLIP3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 ASNA1O43681 348 aa3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 NPHS1O60500 1241 aa3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 BCAS2O75934 225 aaPredicted RBP3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 SMC2O95347 1197 aa3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 GCNT3O95395 438 aa3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 FGFR1OPO95684 399 aaKnown RBP3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 FTCDO95954 541 aa3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 S1PR4O95977 384 aa3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 F9P00740 461 aa3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 PLGP00747 810 aaPredicted RBP3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 GHRHP01286 108 aa3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 IFNB1P01574 187 aa3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 ANXA1P04083 346 aa3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 S100A6P06703 90 aa3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 TPOP07202 933 aa3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 VIMP08670 466 aaKnown RBP3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 CNPP09543 421 aaKnown RBP3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 DLATP10515 647 aaKnown RBP3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 UBL4AP11441 157 aa3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 C6P13671 934 aa3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 TYRP14679 529 aa3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 SELPP16109 830 aa3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 EN2P19622 333 aaPredicted RBP3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 FGFR4P22455 802 aa3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 EDNRBP24530 442 aa3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 NF2P35240 595 aa3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 HSD17B2P37059 387 aa3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 PPARGP37231 505 aaPredicted RBP3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 GGCXP38435 758 aa3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 ARL1P40616 181 aaPredicted RBP3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 CASP3P42574 277 aa3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 ABCG1P45844 678 aa3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 PHKA2P46019 1235 aa3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 CPA2P48052 419 aa3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 DIO1P49895 249 aa3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 HK3P52790 923 aa3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 GBX2P52951 348 aaPredicted RBP3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 MLLT6P55198 1093 aaPredicted RBP3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 CABP4P57796 275 aa3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 YBEYP58557 167 aaPredicted RBP3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 ZNF445P59923 1031 aa3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 EIF4A1P60842 406 aaKnown RBP3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 YPEL5P62699 121 aa3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 NKX6-1P78426 367 aaPredicted RBP3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 HTRA4P83105 476 aaPredicted RBP3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 POU4F1Q01851 419 aa3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 SPAG1Q07617 926 aa3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 DDR1Q08345 913 aa3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 TBC1D8BQ0IIM8 1120 aa3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 C17orf67Q0P5P2 114 aa3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 SCRN1Q12765 414 aa3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 LMAN2Q12907 356 aa3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 MYO1EQ12965 1108 aa3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 NPRL3Q12980 569 aa3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 TRIM28Q13263 835 aaKnown RBP3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 LAPTM5Q13571 262 aa3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 BMPR2Q13873 1038 aa3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 PTK6Q13882 451 aa3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 CAMK1Q14012 370 aa3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 RCN2Q14257 317 aa3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 RBBP5Q15291 538 aaKnown RBP3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 NR0B2Q15466 257 aa3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 PKN1Q16512 942 aa3.32□□□□□ -1.88
CTDSPL-203ENST00000416688 PCSK7Q16549 785 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms