RNA–Protein interactions for RNA: ENST00000416104.5

LINC00222-202, long intergenic non-protein coding RNA 222, humanhuman

TSL 1 (best) BASIC

Gene LINC00222, Length 1,785 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00222-202ENST00000416104 CRTAC1Q9NQ79 661 aa12.3□□□□□ -0.44
LINC00222-202ENST00000416104 GKN1Q9NS71 199 aa12.3□□□□□ -0.44
LINC00222-202ENST00000416104 GTSE1Q9NYZ3 720 aa12.3□□□□□ -0.44
LINC00222-202ENST00000416104 TRAV19A0A0A6YYK7 116 aa12.3□□□□□ -0.44
LINC00222-202ENST00000416104 LRRIQ3A6PVS8 624 aaPredicted RBP12.3□□□□□ -0.44
LINC00222-202ENST00000416104 ZNF202O95125 648 aa12.3□□□□□ -0.44
LINC00222-202ENST00000416104 C4BPAP04003 597 aaKnown RBP12.3□□□□□ -0.44
LINC00222-202ENST00000416104 USP17L7P0C7H9 530 aa12.3□□□□□ -0.44
LINC00222-202ENST00000416104 CHRNB1P11230 501 aa12.3□□□□□ -0.44
LINC00222-202ENST00000416104 P4HA1P13674 534 aa12.3□□□□□ -0.44
LINC00222-202ENST00000416104 PDE6CP51160 858 aa12.3□□□□□ -0.44
LINC00222-202ENST00000416104 CCR3P51677 355 aa12.3□□□□□ -0.44
LINC00222-202ENST00000416104 NRLP54845 237 aa12.3□□□□□ -0.44
LINC00222-202ENST00000416104 AMPD2Q01433 879 aa12.3□□□□□ -0.44
LINC00222-202ENST00000416104 NCOA4Q13772 614 aa12.3□□□□□ -0.44
LINC00222-202ENST00000416104 ZNF268Q14587 947 aaPredicted RBP12.3□□□□□ -0.44
LINC00222-202ENST00000416104 CCDC142Q17RM4 750 aa12.3□□□□□ -0.44
LINC00222-202ENST00000416104 ZNF699Q32M78 642 aa12.3□□□□□ -0.44
LINC00222-202ENST00000416104 MDH1BQ5I0G3 518 aa12.3□□□□□ -0.44
LINC00222-202ENST00000416104 DGKKQ5KSL6 1271 aa12.3□□□□□ -0.44
LINC00222-202ENST00000416104 CEP135Q66GS9 1140 aa12.3□□□□□ -0.44
LINC00222-202ENST00000416104 TMC2Q8TDI7 906 aa12.3□□□□□ -0.44
LINC00222-202ENST00000416104 USP13Q92995 863 aaPredicted RBP12.3□□□□□ -0.44
LINC00222-202ENST00000416104 PCED1BQ96HM7 432 aa12.3□□□□□ -0.44
LINC00222-202ENST00000416104 FAM126AQ9BYI3 521 aaPredicted RBP12.3□□□□□ -0.44
LINC00222-202ENST00000416104 GZF1Q9H116 711 aaPredicted RBP12.3□□□□□ -0.44
LINC00222-202ENST00000416104 XYLT2Q9H1B5 865 aa12.3□□□□□ -0.44
LINC00222-202ENST00000416104 VRTNQ9H8Y1 702 aa12.3□□□□□ -0.44
LINC00222-202ENST00000416104 TRPC7Q9HCX4 862 aa12.3□□□□□ -0.44
LINC00222-202ENST00000416104 ZSCAN32Q9NX65 697 aa12.3□□□□□ -0.44
LINC00222-202ENST00000416104 TRAF3IP3Q9Y228 551 aa12.3□□□□□ -0.44
LINC00222-202ENST00000416104 PCDHGA2Q9Y5H1 932 aa12.3□□□□□ -0.44
LINC00222-202ENST00000416104 COL4A3Q01955 1670 aa12.29□□□□□ -0.44
LINC00222-202ENST00000416104 GOLGA6L4A6NEF3 574 aa12.29□□□□□ -0.44
LINC00222-202ENST00000416104 IKBKBO14920 756 aa12.29□□□□□ -0.44
LINC00222-202ENST00000416104 RPL13P26373 211 aaKnown RBP12.29□□□□□ -0.44
LINC00222-202ENST00000416104 CTHP32929 405 aa12.29□□□□□ -0.44
LINC00222-202ENST00000416104 SOX9P48436 509 aa12.29□□□□□ -0.44
LINC00222-202ENST00000416104 FAM160A1Q05DH4 1040 aa12.29□□□□□ -0.44
LINC00222-202ENST00000416104 DPYDQ12882 1025 aa12.29□□□□□ -0.44
LINC00222-202ENST00000416104 SGSM1Q2NKQ1 1148 aa12.29□□□□□ -0.44
LINC00222-202ENST00000416104 TDRD10Q5VZ19 366 aaKnown RBP12.29□□□□□ -0.44
LINC00222-202ENST00000416104 DENND5BQ6ZUT9 1274 aa12.29□□□□□ -0.44
LINC00222-202ENST00000416104 PLEKHO2Q8TD55 490 aa12.29□□□□□ -0.44
LINC00222-202ENST00000416104 C8orf48Q96LL4 319 aa12.29□□□□□ -0.44
LINC00222-202ENST00000416104 ELOVL4Q9GZR5 314 aa12.29□□□□□ -0.44
LINC00222-202ENST00000416104 TRPM5Q9NZQ8 1165 aa12.29□□□□□ -0.44
LINC00222-202ENST00000416104 CCL26Q9Y258 94 aa12.29□□□□□ -0.44
LINC00222-202ENST00000416104 CKMP06732 381 aa12.28□□□□□ -0.44
LINC00222-202ENST00000416104 PRR29P0C7W0 189 aa12.28□□□□□ -0.44
LINC00222-202ENST00000416104 HDCP19113 662 aa12.28□□□□□ -0.44
LINC00222-202ENST00000416104 CXCL12P48061 93 aa12.28□□□□□ -0.44
LINC00222-202ENST00000416104 PPP3CCP48454 512 aa12.28□□□□□ -0.44
LINC00222-202ENST00000416104 NUCB2P80303 420 aa12.28□□□□□ -0.44
LINC00222-202ENST00000416104 TNK2Q07912 1038 aa12.28□□□□□ -0.44
LINC00222-202ENST00000416104 RUNX3Q13761 415 aa12.28□□□□□ -0.44
LINC00222-202ENST00000416104 KCNB1Q14721 858 aa12.28□□□□□ -0.44
LINC00222-202ENST00000416104 PDGFRLQ15198 375 aa12.28□□□□□ -0.44
LINC00222-202ENST00000416104 TAF4BQ92750 862 aa12.28□□□□□ -0.44
LINC00222-202ENST00000416104 EXOC4Q96A65 974 aa12.28□□□□□ -0.44
LINC00222-202ENST00000416104 TNIP3Q96KP6 325 aa12.28□□□□□ -0.44
LINC00222-202ENST00000416104 FAM83CQ9BQN1 747 aa12.28□□□□□ -0.44
LINC00222-202ENST00000416104 PRMT8Q9NR22 394 aaPredicted RBP12.28□□□□□ -0.44
LINC00222-202ENST00000416104 ZFHX2Q9C0A1 2572 aaPredicted RBP12.28□□□□□ -0.44
LINC00222-202ENST00000416104 F8VP50 259 aa12.28□□□□□ -0.44
LINC00222-202ENST00000416104 MAPK13O15264 365 aa12.28□□□□□ -0.44
LINC00222-202ENST00000416104 TADA3O75528 432 aa12.28□□□□□ -0.44
LINC00222-202ENST00000416104 KRT13P13646 458 aa12.28□□□□□ -0.44
LINC00222-202ENST00000416104 PFKLP17858 780 aa12.28□□□□□ -0.44
LINC00222-202ENST00000416104 TRIM21P19474 475 aaKnown RBP12.28□□□□□ -0.44
LINC00222-202ENST00000416104 NR2F2P24468 414 aa12.28□□□□□ -0.44
LINC00222-202ENST00000416104 VAMP7P51809 220 aa12.28□□□□□ -0.44
LINC00222-202ENST00000416104 DLG4P78352 724 aa12.28□□□□□ -0.44
LINC00222-202ENST00000416104 PON2Q15165 354 aa12.28□□□□□ -0.44
LINC00222-202ENST00000416104 NFIL3Q16649 462 aa12.28□□□□□ -0.44
LINC00222-202ENST00000416104 ZACNQ401N2 412 aa12.28□□□□□ -0.44
LINC00222-202ENST00000416104 TSSK4Q6SA08 328 aa12.28□□□□□ -0.44
LINC00222-202ENST00000416104 SYNPOQ8N3V7 929 aa12.28□□□□□ -0.44
LINC00222-202ENST00000416104 GUF1Q8N442 669 aaKnown RBP12.28□□□□□ -0.44
LINC00222-202ENST00000416104 SPEM1Q8N4L4 309 aa12.28□□□□□ -0.44
LINC00222-202ENST00000416104 ARL14EPQ8N8R7 260 aaPredicted RBP12.28□□□□□ -0.44
LINC00222-202ENST00000416104 ZBTB44Q8NCP5 570 aa12.28□□□□□ -0.44
LINC00222-202ENST00000416104 B3GALNT2Q8NCR0 500 aa12.28□□□□□ -0.44
LINC00222-202ENST00000416104 CYP2S1Q96SQ9 504 aa12.28□□□□□ -0.44
LINC00222-202ENST00000416104 HINFPQ9BQA5 517 aa12.28□□□□□ -0.44
LINC00222-202ENST00000416104 GOLPH3LQ9H4A5 285 aa12.28□□□□□ -0.44
LINC00222-202ENST00000416104 DPEP3Q9H4B8 488 aa12.28□□□□□ -0.44
LINC00222-202ENST00000416104 GDPD2Q9HCC8 539 aa12.28□□□□□ -0.44
LINC00222-202ENST00000416104 MAPK8IP1Q9UQF2 711 aa12.28□□□□□ -0.44
LINC00222-202ENST00000416104 ATP8B3O60423 1300 aa12.28□□□□□ -0.44
LINC00222-202ENST00000416104 VNN1O95497 513 aa12.27□□□□□ -0.45
LINC00222-202ENST00000416104 PSMC2P35998 433 aaKnown RBP12.27□□□□□ -0.45
LINC00222-202ENST00000416104 CDH8P55286 799 aa12.27□□□□□ -0.45
LINC00222-202ENST00000416104 NOP14P78316 857 aaKnown RBP12.27□□□□□ -0.45
LINC00222-202ENST00000416104 GRSF1Q12849 480 aaKnown RBP eCLIP12.27□□□□□ -0.45
LINC00222-202ENST00000416104 MTF1Q14872 753 aa12.27□□□□□ -0.45
LINC00222-202ENST00000416104 TXNDC11Q6PKC3 985 aa12.27□□□□□ -0.45
LINC00222-202ENST00000416104 INTS8Q75QN2 995 aaKnown RBP12.27□□□□□ -0.45
LINC00222-202ENST00000416104 SV2AQ7L0J3 742 aa12.27□□□□□ -0.45
LINC00222-202ENST00000416104 TTC16Q8NEE8 873 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms