RNA–Protein interactions for RNA: ENST00000415409.5

HDAC8-211, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-211ENST00000415409 SPATA4Q8NEY3 305 aa7.02□□□□□ -1.29
HDAC8-211ENST00000415409 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.02□□□□□ -1.29
HDAC8-211ENST00000415409 ACTRT1Q8TDG2 376 aa7.02□□□□□ -1.29
HDAC8-211ENST00000415409 IPO4Q8TEX9 1081 aaKnown RBP7.02□□□□□ -1.29
HDAC8-211ENST00000415409 SH3TC2Q8TF17 1288 aa7.02□□□□□ -1.29
HDAC8-211ENST00000415409 MS4A14Q96JA4 679 aa7.02□□□□□ -1.29
HDAC8-211ENST00000415409 PPP1R10Q96QC0 940 aaKnown RBP7.02□□□□□ -1.29
HDAC8-211ENST00000415409 TWNKQ96RR1 684 aa7.02□□□□□ -1.29
HDAC8-211ENST00000415409 GAD1Q99259 594 aa7.02□□□□□ -1.29
HDAC8-211ENST00000415409 ADAM2Q99965 735 aa7.02□□□□□ -1.29
HDAC8-211ENST00000415409 ZSWIM1Q9BR11 485 aa7.02□□□□□ -1.29
HDAC8-211ENST00000415409 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.02□□□□□ -1.297e-6■■□□□ 11.5
HDAC8-211ENST00000415409 MRPL45Q9BRJ2 306 aaKnown RBP7.02□□□□□ -1.29
HDAC8-211ENST00000415409 PLVAPQ9BX97 442 aa7.02□□□□□ -1.29
HDAC8-211ENST00000415409 KLF16Q9BXK1 252 aaPredicted RBP7.02□□□□□ -1.29
HDAC8-211ENST00000415409 CARD9Q9H257 536 aa7.02□□□□□ -1.29
HDAC8-211ENST00000415409 CXCL16Q9H2A7 254 aa7.02□□□□□ -1.29
HDAC8-211ENST00000415409 GOLPH3Q9H4A6 298 aa7.02□□□□□ -1.29
HDAC8-211ENST00000415409 RSAD1Q9HA92 442 aa7.02□□□□□ -1.29
HDAC8-211ENST00000415409 GDAP2Q9NXN4 497 aa7.02□□□□□ -1.29
HDAC8-211ENST00000415409 WDR35Q9P2L0 1181 aa7.02□□□□□ -1.29
HDAC8-211ENST00000415409 HESX1Q9UBX0 185 aa7.02□□□□□ -1.29
HDAC8-211ENST00000415409 CHORDC1Q9UHD1 332 aaPredicted RBP7.02□□□□□ -1.29
HDAC8-211ENST00000415409 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.02□□□□□ -1.29
HDAC8-211ENST00000415409 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.02□□□□□ -1.29
HDAC8-211ENST00000415409 PLXNA1Q9UIW2 1896 aa7.02□□□□□ -1.29
HDAC8-211ENST00000415409 TARSL2A2RTX5 802 aaKnown RBP7.01□□□□□ -1.29
HDAC8-211ENST00000415409 O00370 1275 aa7.01□□□□□ -1.29
HDAC8-211ENST00000415409 PDE2AO00408 941 aaPredicted RBP7.01□□□□□ -1.29
HDAC8-211ENST00000415409 PODXLO00592 558 aa7.01□□□□□ -1.29
HDAC8-211ENST00000415409 PTGESO14684 152 aa7.01□□□□□ -1.29
HDAC8-211ENST00000415409 DDX3YO15523 660 aaKnown RBP7.01□□□□□ -1.29
HDAC8-211ENST00000415409 ERLIN1O75477 346 aa7.01□□□□□ -1.29
HDAC8-211ENST00000415409 PROSCO94903 275 aa7.01□□□□□ -1.29
HDAC8-211ENST00000415409 RHOXF2BP0C7M4 288 aa7.01□□□□□ -1.29
HDAC8-211ENST00000415409 SETSIPP0DME0 302 aa7.01□□□□□ -1.29
HDAC8-211ENST00000415409 SELPP16109 830 aa7.01□□□□□ -1.29
HDAC8-211ENST00000415409 IBSPP21815 317 aaPredicted RBP7.01□□□□□ -1.29
HDAC8-211ENST00000415409 MAN1A1P33908 653 aa7.01□□□□□ -1.29
HDAC8-211ENST00000415409 GNL1P36915 607 aaPredicted RBP7.01□□□□□ -1.29
HDAC8-211ENST00000415409 RWDD2BP57060 319 aa7.01□□□□□ -1.29
HDAC8-211ENST00000415409 LILRA4P59901 499 aa7.01□□□□□ -1.29
HDAC8-211ENST00000415409 PSMC1P62191 440 aaKnown RBP7.01□□□□□ -1.29
HDAC8-211ENST00000415409 RBM10P98175 930 aaKnown RBP7.01□□□□□ -1.29
HDAC8-211ENST00000415409 C2orf54Q08AI8 447 aa7.01□□□□□ -1.29
HDAC8-211ENST00000415409 PTP4A2Q12974 167 aa7.01□□□□□ -1.29
HDAC8-211ENST00000415409 ORC1Q13415 861 aa7.01□□□□□ -1.29
HDAC8-211ENST00000415409 ZNF268Q14587 947 aaPredicted RBP7.01□□□□□ -1.29
HDAC8-211ENST00000415409 BRD3Q15059 726 aa7.01□□□□□ -1.29
HDAC8-211ENST00000415409 SOWAHAQ2M3V2 549 aa7.01□□□□□ -1.29
HDAC8-211ENST00000415409 GOLGA7BQ2TAP0 167 aa7.01□□□□□ -1.29
HDAC8-211ENST00000415409 SEL1L2Q5TEA6 688 aa7.01□□□□□ -1.29
HDAC8-211ENST00000415409 LCLAT1Q6UWP7 414 aa7.01□□□□□ -1.29
HDAC8-211ENST00000415409 DSTYKQ6XUX3 929 aa7.01□□□□□ -1.29
HDAC8-211ENST00000415409 PHLDB2Q86SQ0 1253 aa7.01□□□□□ -1.29
HDAC8-211ENST00000415409 ADGRF2Q8IZF7 708 aa7.01□□□□□ -1.29
HDAC8-211ENST00000415409 CRYBG2Q8N1P7 616 aa7.01□□□□□ -1.29
HDAC8-211ENST00000415409 RASGEF1CQ8N431 466 aa7.01□□□□□ -1.29
HDAC8-211ENST00000415409 WDTC1Q8N5D0 677 aa7.01□□□□□ -1.29
HDAC8-211ENST00000415409 C3orf20Q8ND61 904 aa7.01□□□□□ -1.29
HDAC8-211ENST00000415409 FEZF2Q8TBJ5 459 aa7.01□□□□□ -1.29
HDAC8-211ENST00000415409 RUBCNQ92622 972 aa7.01□□□□□ -1.29
HDAC8-211ENST00000415409 LPPQ93052 612 aa7.01□□□□□ -1.29
HDAC8-211ENST00000415409 C18orf8Q96DM3 657 aa7.01□□□□□ -1.29
HDAC8-211ENST00000415409 TNIP3Q96KP6 325 aa7.01□□□□□ -1.29
HDAC8-211ENST00000415409 UROC1Q96N76 676 aa7.01□□□□□ -1.29
HDAC8-211ENST00000415409 DEFB118Q96PH6 123 aa7.01□□□□□ -1.29
HDAC8-211ENST00000415409 RHOXF2Q9BQY4 288 aa7.01□□□□□ -1.29
HDAC8-211ENST00000415409 FTHL17Q9BXU8 183 aa7.01□□□□□ -1.29
HDAC8-211ENST00000415409 PARD6BQ9BYG5 372 aa7.01□□□□□ -1.29
HDAC8-211ENST00000415409 RNF208Q9H0X6 261 aa7.01□□□□□ -1.29
HDAC8-211ENST00000415409 PAK6Q9NQU5 681 aaPredicted RBP7.01□□□□□ -1.29
HDAC8-211ENST00000415409 RNF19AQ9NV58 838 aa7.01□□□□□ -1.29
HDAC8-211ENST00000415409 HMGXB4Q9UGU5 601 aa7.01□□□□□ -1.29
HDAC8-211ENST00000415409 IP6K2Q9UHH9 426 aa7.01□□□□□ -1.29
HDAC8-211ENST00000415409 TTC7AQ9ULT0 858 aaPredicted RBP7.01□□□□□ -1.29
HDAC8-211ENST00000415409 ZNFX1Q9P2E3 1918 aaKnown RBP7.01□□□□□ -1.29
HDAC8-211ENST00000415409 MGAMO43451 1857 aa7□□□□□ -1.29
HDAC8-211ENST00000415409 SIP14410 1827 aa7□□□□□ -1.29
HDAC8-211ENST00000415409 GOLGA6L10A0A0M3HER8 536 aa7□□□□□ -1.29
HDAC8-211ENST00000415409 ARHGEF37A1IGU5 675 aa7□□□□□ -1.29
HDAC8-211ENST00000415409 TMEM191CA6NGB0 347 aa7□□□□□ -1.29
HDAC8-211ENST00000415409 CCDC188H7C350 402 aa7□□□□□ -1.29
HDAC8-211ENST00000415409 KRIT1O00522 736 aa7□□□□□ -1.29
HDAC8-211ENST00000415409 CYB561D2O14569 222 aa7□□□□□ -1.29
HDAC8-211ENST00000415409 MGEA5O60502 916 aa7□□□□□ -1.29
HDAC8-211ENST00000415409 EOMESO95936 686 aa7□□□□□ -1.29
HDAC8-211ENST00000415409 KRT3P12035 628 aa7□□□□□ -1.29
HDAC8-211ENST00000415409 CCL5P13501 91 aa7□□□□□ -1.29
HDAC8-211ENST00000415409 H2AFXP16104 143 aaPredicted RBP7□□□□□ -1.29
HDAC8-211ENST00000415409 DESP17661 470 aa7□□□□□ -1.29
HDAC8-211ENST00000415409 WARSP23381 471 aaKnown RBP7□□□□□ -1.29
HDAC8-211ENST00000415409 CTNNA1P35221 906 aaKnown RBP7□□□□□ -1.29
HDAC8-211ENST00000415409 CETN2P41208 172 aa7□□□□□ -1.29
HDAC8-211ENST00000415409 GPD2P43304 727 aa7□□□□□ -1.29
HDAC8-211ENST00000415409 SSR1P43307 286 aaKnown RBP7□□□□□ -1.29
HDAC8-211ENST00000415409 LHX1P48742 406 aa7□□□□□ -1.29
HDAC8-211ENST00000415409 CDK7P50613 346 aa7□□□□□ -1.29
HDAC8-211ENST00000415409 SCNN1GP51170 649 aa7□□□□□ -1.29
HDAC8-211ENST00000415409 SLC8A3P57103 927 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms