RNA–Protein interactions for RNA: ENST00000414670.2

ITGB1-203, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 500 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-203ENST00000414670 THAP2Q9H0W7 228 aa6.59□□□□□ -1.35
ITGB1-203ENST00000414670 LHX5Q9H2C1 402 aa6.59□□□□□ -1.35
ITGB1-203ENST00000414670 SNX25Q9H3E2 840 aa6.59□□□□□ -1.35
ITGB1-203ENST00000414670 PRDM5Q9NQX1 630 aaPredicted RBP6.59□□□□□ -1.35
ITGB1-203ENST00000414670 HOMER3Q9NSC5 361 aa6.59□□□□□ -1.35
ITGB1-203ENST00000414670 TBC1D13Q9NVG8 400 aa6.59□□□□□ -1.35
ITGB1-203ENST00000414670 CTTNBP2NLQ9P2B4 639 aa6.59□□□□□ -1.35
ITGB1-203ENST00000414670 CACNG4Q9UBN1 327 aa6.59□□□□□ -1.35
ITGB1-203ENST00000414670 SALL4Q9UJQ4 1053 aa6.59□□□□□ -1.35
ITGB1-203ENST00000414670 GTF3C4Q9UKN8 822 aa6.59□□□□□ -1.35
ITGB1-203ENST00000414670 CAPN6Q9Y6Q1 641 aa6.59□□□□□ -1.35
ITGB1-203ENST00000414670 NCANO14594 1321 aa6.58□□□□□ -1.36
ITGB1-203ENST00000414670 TRIM43BA6NCK2 446 aa6.58□□□□□ -1.36
ITGB1-203ENST00000414670 C5orf60A6NFR6 353 aa6.58□□□□□ -1.36
ITGB1-203ENST00000414670 O00370 1275 aa6.58□□□□□ -1.36
ITGB1-203ENST00000414670 NDUFAB1O14561 156 aa6.58□□□□□ -1.36
ITGB1-203ENST00000414670 HSF2BPO75031 334 aa6.58□□□□□ -1.36
ITGB1-203ENST00000414670 DDHD2O94830 711 aa6.58□□□□□ -1.36
ITGB1-203ENST00000414670 MICAL2O94851 1124 aa6.58□□□□□ -1.36
ITGB1-203ENST00000414670 CYP1A2P05177 515 aa6.58□□□□□ -1.36
ITGB1-203ENST00000414670 PDGFRBP09619 1106 aa6.58□□□□□ -1.36
ITGB1-203ENST00000414670 MYBL1P10243 752 aa6.58□□□□□ -1.36
ITGB1-203ENST00000414670 EN2P19622 333 aaPredicted RBP6.58□□□□□ -1.36
ITGB1-203ENST00000414670 LMO2P25791 158 aa6.58□□□□□ -1.36
ITGB1-203ENST00000414670 SSTR3P32745 418 aaPredicted RBP6.58□□□□□ -1.36
ITGB1-203ENST00000414670 CDH5P33151 784 aaPredicted RBP6.58□□□□□ -1.36
ITGB1-203ENST00000414670 MDH1P40925 334 aaKnown RBP6.58□□□□□ -1.36
ITGB1-203ENST00000414670 LHX1P48742 406 aa6.58□□□□□ -1.36
ITGB1-203ENST00000414670 RNASELQ05823 741 aaKnown RBP6.58□□□□□ -1.36
ITGB1-203ENST00000414670 DSC1Q08554 894 aa6.58□□□□□ -1.36
ITGB1-203ENST00000414670 XRCC4Q13426 336 aa6.58□□□□□ -1.36
ITGB1-203ENST00000414670 TIGD5Q53EQ6 642 aa6.58□□□□□ -1.36
ITGB1-203ENST00000414670 LIN9Q5TKA1 542 aa6.58□□□□□ -1.36
ITGB1-203ENST00000414670 WSCD1Q658N2 575 aa6.58□□□□□ -1.36
ITGB1-203ENST00000414670 MFSD5Q6N075 450 aa6.58□□□□□ -1.36
ITGB1-203ENST00000414670 DENND1BQ6P3S1 775 aa6.58□□□□□ -1.36
ITGB1-203ENST00000414670 MON1BQ7L1V2 547 aa6.58□□□□□ -1.36
ITGB1-203ENST00000414670 UBE2Q1Q7Z7E8 422 aa6.58□□□□□ -1.36
ITGB1-203ENST00000414670 ACOT1Q86TX2 421 aa6.58□□□□□ -1.36
ITGB1-203ENST00000414670 OSTM1Q86WC4 334 aa6.58□□□□□ -1.36
ITGB1-203ENST00000414670 ZNF280BQ86YH2 543 aa6.58□□□□□ -1.36
ITGB1-203ENST00000414670 PHF13Q86YI8 300 aaPredicted RBP6.58□□□□□ -1.36
ITGB1-203ENST00000414670 CREG2Q8IUH2 290 aa6.58□□□□□ -1.36
ITGB1-203ENST00000414670 NPAS4Q8IUM7 802 aa6.58□□□□□ -1.36
ITGB1-203ENST00000414670 APLFQ8IW19 511 aaPredicted RBP6.58□□□□□ -1.36
ITGB1-203ENST00000414670 RHOT2Q8IXI1 618 aa6.58□□□□□ -1.36
ITGB1-203ENST00000414670 COLGALT2Q8IYK4 626 aa6.58□□□□□ -1.36
ITGB1-203ENST00000414670 MCOLN2Q8IZK6 566 aa6.58□□□□□ -1.36
ITGB1-203ENST00000414670 CRYBG2Q8N1P7 616 aa6.58□□□□□ -1.36
ITGB1-203ENST00000414670 TMEM86AQ8N2M4 240 aa6.58□□□□□ -1.36
ITGB1-203ENST00000414670 TPCN2Q8NHX9 752 aa6.58□□□□□ -1.36
ITGB1-203ENST00000414670 SLC35G2Q8TBE7 412 aa6.58□□□□□ -1.36
ITGB1-203ENST00000414670 SPATA18Q8TC71 538 aa6.58□□□□□ -1.36
ITGB1-203ENST00000414670 CCHCR1Q8TD31 782 aa6.58□□□□□ -1.36
ITGB1-203ENST00000414670 CPA5Q8WXQ8 436 aa6.58□□□□□ -1.36
ITGB1-203ENST00000414670 RSPH1Q8WYR4 309 aa6.58□□□□□ -1.36
ITGB1-203ENST00000414670 TRIM43Q96BQ3 446 aaPredicted RBP6.58□□□□□ -1.36
ITGB1-203ENST00000414670 CENPTQ96BT3 561 aa6.58□□□□□ -1.36
ITGB1-203ENST00000414670 ARHGEF26Q96DR7 871 aa6.58□□□□□ -1.36
ITGB1-203ENST00000414670 SGSM3Q96HU1 749 aa6.58□□□□□ -1.36
ITGB1-203ENST00000414670 VCPIP1Q96JH7 1222 aa6.58□□□□□ -1.36
ITGB1-203ENST00000414670 TNIP3Q96KP6 325 aa6.58□□□□□ -1.36
ITGB1-203ENST00000414670 CALR3Q96L12 384 aaKnown RBP6.58□□□□□ -1.36
ITGB1-203ENST00000414670 ANKRD27Q96NW4 1050 aa6.58□□□□□ -1.36
ITGB1-203ENST00000414670 CASD1Q96PB1 797 aa6.58□□□□□ -1.36
ITGB1-203ENST00000414670 FAM193BQ96PV7 902 aaPredicted RBP6.58□□□□□ -1.36
ITGB1-203ENST00000414670 CCT8L2Q96SF2 557 aa6.58□□□□□ -1.36
ITGB1-203ENST00000414670 MRPL9Q9BYD2 267 aaKnown RBP6.58□□□□□ -1.36
ITGB1-203ENST00000414670 KDM4CQ9H3R0 1056 aa6.58□□□□□ -1.36
ITGB1-203ENST00000414670 AVENQ9NQS1 362 aaPredicted RBP6.58□□□□□ -1.36
ITGB1-203ENST00000414670 ADAM22Q9P0K1 906 aa6.58□□□□□ -1.36
ITGB1-203ENST00000414670 CNOT8Q9UFF9 292 aaKnown RBP6.58□□□□□ -1.36
ITGB1-203ENST00000414670 TSPAN16Q9UKR8 245 aa6.58□□□□□ -1.36
ITGB1-203ENST00000414670 SNX12Q9UMY4 172 aa6.58□□□□□ -1.36
ITGB1-203ENST00000414670 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.58□□□□□ -1.36
ITGB1-203ENST00000414670 STXBP5LQ9Y2K9 1186 aa6.58□□□□□ -1.36
ITGB1-203ENST00000414670 NME7Q9Y5B8 376 aa6.58□□□□□ -1.36
ITGB1-203ENST00000414670 PCDHGC5Q9Y5F6 944 aa6.58□□□□□ -1.36
ITGB1-203ENST00000414670 ABHD14A-ACY1A0A1B0GW23 586 aa6.57□□□□□ -1.36
ITGB1-203ENST00000414670 ARHGEF37A1IGU5 675 aa6.57□□□□□ -1.36
ITGB1-203ENST00000414670 GRID2IPA4D2P6 1211 aa6.57□□□□□ -1.36
ITGB1-203ENST00000414670 KLHL33A6NCF5 533 aa6.57□□□□□ -1.36
ITGB1-203ENST00000414670 ANKRD65E5RJM6 399 aa6.57□□□□□ -1.36
ITGB1-203ENST00000414670 H0YHG0 523 aa6.57□□□□□ -1.36
ITGB1-203ENST00000414670 TMEM189-UBE2V1I3L0A0 370 aa6.57□□□□□ -1.36
ITGB1-203ENST00000414670 I3L4J1 428 aa6.57□□□□□ -1.36
ITGB1-203ENST00000414670 M0QYV0 167 aa6.57□□□□□ -1.36
ITGB1-203ENST00000414670 M0QZQ0 153 aa6.57□□□□□ -1.36
ITGB1-203ENST00000414670 GABRDO14764 452 aa6.57□□□□□ -1.36
ITGB1-203ENST00000414670 ATMINO43313 823 aaPredicted RBP6.57□□□□□ -1.36
ITGB1-203ENST00000414670 HCRTO43612 131 aa6.57□□□□□ -1.36
ITGB1-203ENST00000414670 MGRN1O60291 552 aa6.57□□□□□ -1.36
ITGB1-203ENST00000414670 B4GALT3O60512 393 aa6.57□□□□□ -1.36
ITGB1-203ENST00000414670 EFCAB14O75071 495 aa6.57□□□□□ -1.36
ITGB1-203ENST00000414670 PALMO75781 387 aa6.57□□□□□ -1.36
ITGB1-203ENST00000414670 DNAJC8O75937 253 aaPredicted RBP6.57□□□□□ -1.36
ITGB1-203ENST00000414670 MTA2O94776 668 aa6.57□□□□□ -1.36
ITGB1-203ENST00000414670 CYP11A1P05108 521 aa6.57□□□□□ -1.36
ITGB1-203ENST00000414670 CALB1P05937 261 aa6.57□□□□□ -1.36
ITGB1-203ENST00000414670 PFKMP08237 780 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms