RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 A0A1W2PPC4 97 aa4.63□□□□□ -1.67
HMGB1P11-201ENST00000413899 hCG_1984214I3L0E3 225 aa4.63□□□□□ -1.67
HMGB1P11-201ENST00000413899 AREL1O15033 823 aa4.63□□□□□ -1.67
HMGB1P11-201ENST00000413899 MYL3P08590 195 aa4.63□□□□□ -1.67
HMGB1P11-201ENST00000413899 BTF3P20290 206 aaKnown RBP4.63□□□□□ -1.67
HMGB1P11-201ENST00000413899 ACVR2AP27037 513 aa4.63□□□□□ -1.67
HMGB1P11-201ENST00000413899 IL1R2P27930 398 aa4.63□□□□□ -1.67
HMGB1P11-201ENST00000413899 ADRA1BP35368 520 aa4.63□□□□□ -1.67
HMGB1P11-201ENST00000413899 STT3AP46977 705 aa4.63□□□□□ -1.67
HMGB1P11-201ENST00000413899 PDE6CP51160 858 aa4.63□□□□□ -1.67
HMGB1P11-201ENST00000413899 KRT17Q04695 432 aa4.63□□□□□ -1.67
HMGB1P11-201ENST00000413899 DPTQ07507 201 aa4.63□□□□□ -1.67
HMGB1P11-201ENST00000413899 ARHGEF7Q14155 803 aa4.63□□□□□ -1.67
HMGB1P11-201ENST00000413899 SYCP2LQ5T4T6 812 aa4.63□□□□□ -1.67
HMGB1P11-201ENST00000413899 TEDDM1Q5T9Z0 273 aa4.63□□□□□ -1.67
HMGB1P11-201ENST00000413899 FCRL6Q6DN72 434 aa4.63□□□□□ -1.67
HMGB1P11-201ENST00000413899 RGS7BPQ6MZT1 257 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P11-201ENST00000413899 PCSK4Q6UW60 755 aa4.63□□□□□ -1.67
HMGB1P11-201ENST00000413899 MRGPRGQ86SM5 289 aa4.63□□□□□ -1.67
HMGB1P11-201ENST00000413899 SLC15A3Q8IY34 581 aa4.63□□□□□ -1.67
HMGB1P11-201ENST00000413899 SAMD3Q8N6K7 520 aa4.63□□□□□ -1.67
HMGB1P11-201ENST00000413899 BPIFB1Q8TDL5 484 aa4.63□□□□□ -1.67
HMGB1P11-201ENST00000413899 FKBP10Q96AY3 582 aa4.63□□□□□ -1.67
HMGB1P11-201ENST00000413899 MYD88Q99836 296 aa4.63□□□□□ -1.67
HMGB1P11-201ENST00000413899 ELAC2Q9BQ52 826 aaKnown RBP4.63□□□□□ -1.67
HMGB1P11-201ENST00000413899 ALG8Q9BVK2 526 aa4.63□□□□□ -1.67
HMGB1P11-201ENST00000413899 PCED1AQ9H1Q7 454 aa4.63□□□□□ -1.67
HMGB1P11-201ENST00000413899 FAM83DQ9H4H8 585 aa4.63□□□□□ -1.67
HMGB1P11-201ENST00000413899 KLC4Q9NSK0 619 aa4.63□□□□□ -1.67
HMGB1P11-201ENST00000413899 MYO1AQ9UBC5 1043 aa4.63□□□□□ -1.67
HMGB1P11-201ENST00000413899 MID2Q9UJV3 735 aa4.63□□□□□ -1.67
HMGB1P11-201ENST00000413899 SERTAD3Q9UJW9 196 aa4.63□□□□□ -1.67
HMGB1P11-201ENST00000413899 PACSIN3Q9UKS6 424 aa4.63□□□□□ -1.67
HMGB1P11-201ENST00000413899 MRPS17Q9Y2R5 130 aaKnown RBP4.63□□□□□ -1.67
HMGB1P11-201ENST00000413899 CCDC180Q9P1Z9 1646 aa4.62□□□□□ -1.67
HMGB1P11-201ENST00000413899 CCDC151A5D8V7 595 aa4.62□□□□□ -1.67
HMGB1P11-201ENST00000413899 PPM1DO15297 605 aa4.62□□□□□ -1.67
HMGB1P11-201ENST00000413899 THAP12O43422 761 aa4.62□□□□□ -1.67
HMGB1P11-201ENST00000413899 TLR5O60602 858 aa4.62□□□□□ -1.67
HMGB1P11-201ENST00000413899 RASSF9O75901 435 aa4.62□□□□□ -1.67
HMGB1P11-201ENST00000413899 FGF18O76093 207 aa4.62□□□□□ -1.67
HMGB1P11-201ENST00000413899 RHOBTB3O94955 611 aa4.62□□□□□ -1.67
HMGB1P11-201ENST00000413899 FSHBP01225 129 aa4.62□□□□□ -1.67
HMGB1P11-201ENST00000413899 GCP02774 474 aa4.62□□□□□ -1.67
HMGB1P11-201ENST00000413899 A1BGP04217 495 aa4.62□□□□□ -1.67
HMGB1P11-201ENST00000413899 IFIT2P09913 472 aaKnown RBP4.62□□□□□ -1.67
HMGB1P11-201ENST00000413899 TNFSF4P23510 183 aa4.62□□□□□ -1.67
HMGB1P11-201ENST00000413899 HTR3AP46098 478 aa4.62□□□□□ -1.67
HMGB1P11-201ENST00000413899 CPT1AP50416 773 aa4.62□□□□□ -1.67
HMGB1P11-201ENST00000413899 INHBCP55103 352 aa4.62□□□□□ -1.67
HMGB1P11-201ENST00000413899 MRPS35P82673 323 aaKnown RBP4.62□□□□□ -1.67
HMGB1P11-201ENST00000413899 KLF10Q13118 480 aa4.62□□□□□ -1.67
HMGB1P11-201ENST00000413899 SLC29A2Q14542 456 aa4.62□□□□□ -1.67
HMGB1P11-201ENST00000413899 TXNRD1Q16881 649 aa4.62□□□□□ -1.67
HMGB1P11-201ENST00000413899 CATSPERGQ6ZRH7 1159 aa4.62□□□□□ -1.67
HMGB1P11-201ENST00000413899 TSHZ1Q6ZSZ6 1077 aa4.62□□□□□ -1.67
HMGB1P11-201ENST00000413899 KRT28Q7Z3Y7 464 aa4.62□□□□□ -1.67
HMGB1P11-201ENST00000413899 SLC44A3Q8N4M1 653 aa4.62□□□□□ -1.67
HMGB1P11-201ENST00000413899 OR2C3Q8N628 320 aa4.62□□□□□ -1.67
HMGB1P11-201ENST00000413899 VGLL2Q8N8G2 317 aa4.62□□□□□ -1.67
HMGB1P11-201ENST00000413899 SLC16A11Q8NCK7 471 aa4.62□□□□□ -1.67
HMGB1P11-201ENST00000413899 TOR1AIP2Q8NFQ8 470 aa4.62□□□□□ -1.67
HMGB1P11-201ENST00000413899 PARD3BQ8TEW8 1205 aa4.62□□□□□ -1.67
HMGB1P11-201ENST00000413899 CAVIN3Q969G5 261 aa4.62□□□□□ -1.67
HMGB1P11-201ENST00000413899 IQCDQ96DY2 449 aa4.62□□□□□ -1.67
HMGB1P11-201ENST00000413899 FBXL20Q96IG2 436 aa4.62□□□□□ -1.67
HMGB1P11-201ENST00000413899 PDLIM2Q96JY6 352 aa4.62□□□□□ -1.67
HMGB1P11-201ENST00000413899 PBKQ96KB5 322 aa4.62□□□□□ -1.67
HMGB1P11-201ENST00000413899 CCDC138Q96M89 665 aa4.62□□□□□ -1.67
HMGB1P11-201ENST00000413899 RIPOR3Q96MK2 946 aa4.62□□□□□ -1.67
HMGB1P11-201ENST00000413899 KRTAP4-9Q9BYQ8 210 aa4.62□□□□□ -1.67
HMGB1P11-201ENST00000413899 TRIM5Q9C035 493 aa4.62□□□□□ -1.67
HMGB1P11-201ENST00000413899 SCAND2PQ9GZW5 306 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P11-201ENST00000413899 ALG13Q9NP73 1137 aaKnown RBP4.62□□□□□ -1.67
HMGB1P11-201ENST00000413899 DKK4Q9UBT3 224 aa4.62□□□□□ -1.67
HMGB1P11-201ENST00000413899 ZNF212Q9UDV6 495 aa4.62□□□□□ -1.67
HMGB1P11-201ENST00000413899 ITGB1BP2Q9UKP3 347 aa4.62□□□□□ -1.67
HMGB1P11-201ENST00000413899 HDAC9Q9UKV0 1011 aa4.62□□□□□ -1.67
HMGB1P11-201ENST00000413899 SH2B3Q9UQQ2 575 aa4.62□□□□□ -1.67
HMGB1P11-201ENST00000413899 AQP7P3A6NL99 342 aa4.61□□□□□ -1.67
HMGB1P11-201ENST00000413899 VWC2LB2RUY7 222 aa4.61□□□□□ -1.67
HMGB1P11-201ENST00000413899 ADM5C9JUS6 153 aa4.61□□□□□ -1.67
HMGB1P11-201ENST00000413899 H7C4K7 107 aa4.61□□□□□ -1.67
HMGB1P11-201ENST00000413899 APOL1O14791 398 aa4.61□□□□□ -1.67
HMGB1P11-201ENST00000413899 SLC16A3O15427 465 aaKnown RBP4.61□□□□□ -1.67
HMGB1P11-201ENST00000413899 RRP9O43818 475 aaKnown RBP4.61□□□□□ -1.67
HMGB1P11-201ENST00000413899 NXPH3O95157 252 aa4.61□□□□□ -1.67
HMGB1P11-201ENST00000413899 RHOP08100 348 aa4.61□□□□□ -1.67
HMGB1P11-201ENST00000413899 TYRP1P17643 537 aa4.61□□□□□ -1.67
HMGB1P11-201ENST00000413899 FGFR2P21802 821 aa4.61□□□□□ -1.67
HMGB1P11-201ENST00000413899 PROZP22891 400 aa4.61□□□□□ -1.67
HMGB1P11-201ENST00000413899 PTDSS1P48651 473 aaKnown RBP4.61□□□□□ -1.67
HMGB1P11-201ENST00000413899 ATXN1P54253 815 aaKnown RBP4.61□□□□□ -1.67
HMGB1P11-201ENST00000413899 FHL2Q14192 279 aa4.61□□□□□ -1.67
HMGB1P11-201ENST00000413899 ZNF750Q32MQ0 723 aa4.61□□□□□ -1.67
HMGB1P11-201ENST00000413899 CERCAMQ5T4B2 595 aa4.61□□□□□ -1.67
HMGB1P11-201ENST00000413899 ZNF618Q5T7W0 954 aa4.61□□□□□ -1.67
HMGB1P11-201ENST00000413899 IZUMO3Q5VZ72 239 aa4.61□□□□□ -1.67
HMGB1P11-201ENST00000413899 PLAG1Q6DJT9 500 aa4.61□□□□□ -1.67
HMGB1P11-201ENST00000413899 TOGARAM2Q6ZUX3 1019 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms