RNA–Protein interactions for RNA: ENST00000413731.1

UPF3AP1-201, Transcript of UPF3A pseudogene 1, humanhuman

BASIC

Gene UPF3AP1, Length 1,126 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP1-201ENST00000413731 H0YCG3 227 aa8.93□□□□□ -0.98
UPF3AP1-201ENST00000413731 SLC16A4O15374 487 aa8.93□□□□□ -0.98
UPF3AP1-201ENST00000413731 EXTL3O43909 919 aa8.93□□□□□ -0.98
UPF3AP1-201ENST00000413731 SOAT2O75908 522 aa8.93□□□□□ -0.98
UPF3AP1-201ENST00000413731 CXCL8P10145 99 aa8.93□□□□□ -0.98
UPF3AP1-201ENST00000413731 IDEP14735 1019 aa8.93□□□□□ -0.98
UPF3AP1-201ENST00000413731 RPL9P32969 192 aaKnown RBP8.93□□□□□ -0.98
UPF3AP1-201ENST00000413731 CNR2P34972 360 aa8.93□□□□□ -0.98
UPF3AP1-201ENST00000413731 EIF1AXP47813 144 aaKnown RBP8.93□□□□□ -0.98
UPF3AP1-201ENST00000413731 PXNP49023 591 aaPredicted RBP8.93□□□□□ -0.98
UPF3AP1-201ENST00000413731 GUCY2FP51841 1108 aa8.93□□□□□ -0.98
UPF3AP1-201ENST00000413731 MLLT6P55198 1093 aaPredicted RBP8.93□□□□□ -0.98
UPF3AP1-201ENST00000413731 SPAG1Q07617 926 aa8.93□□□□□ -0.98
UPF3AP1-201ENST00000413731 TNK2Q07912 1038 aa8.93□□□□□ -0.98
UPF3AP1-201ENST00000413731 STRN3Q13033 797 aa8.93□□□□□ -0.98
UPF3AP1-201ENST00000413731 CCINQ13939 588 aa8.93□□□□□ -0.98
UPF3AP1-201ENST00000413731 NOLC1Q14978 699 aaKnown RBP eCLIP8.93□□□□□ -0.98
UPF3AP1-201ENST00000413731 ARSHQ5FYA8 562 aa8.93□□□□□ -0.98
UPF3AP1-201ENST00000413731 DGKKQ5KSL6 1271 aa8.93□□□□□ -0.98
UPF3AP1-201ENST00000413731 N4BP2L1Q5TBK1 243 aaPredicted RBP8.93□□□□□ -0.98
UPF3AP1-201ENST00000413731 IL31Q6EBC2 164 aa8.93□□□□□ -0.98
UPF3AP1-201ENST00000413731 C1orf228Q6PIY5 440 aa8.93□□□□□ -0.98
UPF3AP1-201ENST00000413731 SHC4Q6S5L8 630 aa8.93□□□□□ -0.98
UPF3AP1-201ENST00000413731 GAREM2Q75VX8 874 aa8.93□□□□□ -0.98
UPF3AP1-201ENST00000413731 SV2BQ7L1I2 683 aa8.93□□□□□ -0.98
UPF3AP1-201ENST00000413731 DYMQ7RTS9 669 aa8.93□□□□□ -0.98
UPF3AP1-201ENST00000413731 WDR5BQ86VZ2 330 aa8.93□□□□□ -0.98
UPF3AP1-201ENST00000413731 MYCT1Q8N699 235 aa8.93□□□□□ -0.98
UPF3AP1-201ENST00000413731 APPL2Q8NEU8 664 aa8.93□□□□□ -0.98
UPF3AP1-201ENST00000413731 LEO1Q8WVC0 666 aaPredicted RBP8.93□□□□□ -0.98
UPF3AP1-201ENST00000413731 UBXN4Q92575 508 aa8.93□□□□□ -0.98
UPF3AP1-201ENST00000413731 BICD1Q96G01 975 aa8.93□□□□□ -0.98
UPF3AP1-201ENST00000413731 ZBTB45Q96K62 511 aaPredicted RBP8.93□□□□□ -0.98
UPF3AP1-201ENST00000413731 DMRTB1Q96MA1 342 aa8.93□□□□□ -0.98
UPF3AP1-201ENST00000413731 ACAP3Q96P50 834 aa8.93□□□□□ -0.98
UPF3AP1-201ENST00000413731 CITED4Q96RK1 184 aa8.93□□□□□ -0.98
UPF3AP1-201ENST00000413731 SCAND2PQ9GZW5 306 aaPredicted RBP8.93□□□□□ -0.98
UPF3AP1-201ENST00000413731 SMOC1Q9H4F8 434 aa8.93□□□□□ -0.98
UPF3AP1-201ENST00000413731 C8orf33Q9H7E9 229 aaPredicted RBP8.93□□□□□ -0.98
UPF3AP1-201ENST00000413731 ANGPTL2Q9UKU9 493 aa8.93□□□□□ -0.98
UPF3AP1-201ENST00000413731 ASCC3Q8N3C0 2202 aaKnown RBP8.93□□□□□ -0.98
UPF3AP1-201ENST00000413731 CEP295Q9C0D2 2601 aa8.93□□□□□ -0.98
UPF3AP1-201ENST00000413731 PI4KAP42356 2102 aa8.92□□□□□ -0.98
UPF3AP1-201ENST00000413731 TNRC6BQ9UPQ9 1833 aaKnown RBP8.92□□□□□ -0.98
UPF3AP1-201ENST00000413731 MTMR11A4FU01 709 aa8.92□□□□□ -0.98
UPF3AP1-201ENST00000413731 M0QZQ0 153 aa8.92□□□□□ -0.98
UPF3AP1-201ENST00000413731 PPEF2O14830 753 aa8.92□□□□□ -0.98
UPF3AP1-201ENST00000413731 AXIN1O15169 862 aa8.92□□□□□ -0.98
UPF3AP1-201ENST00000413731 EPN2O95208 641 aa8.92□□□□□ -0.98
UPF3AP1-201ENST00000413731 CDK11BP21127 795 aaKnown RBP8.92□□□□□ -0.98
UPF3AP1-201ENST00000413731 VARSP26640 1264 aaKnown RBP8.92□□□□□ -0.98
UPF3AP1-201ENST00000413731 DDIT3P35638 169 aa8.92□□□□□ -0.98
UPF3AP1-201ENST00000413731 MATR3P43243 847 aaKnown RBP eCLIP8.92□□□□□ -0.98
UPF3AP1-201ENST00000413731 LIMK1P53667 647 aa8.92□□□□□ -0.98
UPF3AP1-201ENST00000413731 CYP4F8P98187 520 aa8.92□□□□□ -0.98
UPF3AP1-201ENST00000413731 YWHAHQ04917 246 aaPredicted RBP8.92□□□□□ -0.98
UPF3AP1-201ENST00000413731 DUSP4Q13115 394 aa8.92□□□□□ -0.98
UPF3AP1-201ENST00000413731 PLD1Q13393 1074 aa8.92□□□□□ -0.98
UPF3AP1-201ENST00000413731 SLC10A6Q3KNW5 377 aa8.92□□□□□ -0.98
UPF3AP1-201ENST00000413731 TBCELQ5QJ74 424 aa8.92□□□□□ -0.98
UPF3AP1-201ENST00000413731 RESP18Q5W5W9 173 aa8.92□□□□□ -0.98
UPF3AP1-201ENST00000413731 KBTBD6Q86V97 674 aa8.92□□□□□ -0.98
UPF3AP1-201ENST00000413731 RALGPS2Q86X27 583 aaPredicted RBP8.92□□□□□ -0.98
UPF3AP1-201ENST00000413731 ARID3BQ8IVW6 561 aaPredicted RBP8.92□□□□□ -0.98
UPF3AP1-201ENST00000413731 IQUBQ8NA54 791 aa8.92□□□□□ -0.98
UPF3AP1-201ENST00000413731 C12orf50Q8NA57 414 aaPredicted RBP8.92□□□□□ -0.98
UPF3AP1-201ENST00000413731 DDX1Q92499 740 aaKnown RBP8.92□□□□□ -0.98
UPF3AP1-201ENST00000413731 E2F7Q96AV8 911 aa8.92□□□□□ -0.98
UPF3AP1-201ENST00000413731 TMEM209Q96SK2 561 aa8.92□□□□□ -0.98
UPF3AP1-201ENST00000413731 PYM1Q9BRP8 204 aaKnown RBP8.92□□□□□ -0.98
UPF3AP1-201ENST00000413731 TCHPQ9BT92 498 aa8.92□□□□□ -0.98
UPF3AP1-201ENST00000413731 LRRC27Q9C0I9 530 aa8.92□□□□□ -0.98
UPF3AP1-201ENST00000413731 GPR88Q9GZN0 384 aa8.92□□□□□ -0.98
UPF3AP1-201ENST00000413731 ARRDC1-AS1Q9H2J1 176 aa8.92□□□□□ -0.98
UPF3AP1-201ENST00000413731 TNMDQ9H2S6 317 aa8.92□□□□□ -0.98
UPF3AP1-201ENST00000413731 CUEDC2Q9H467 287 aa8.92□□□□□ -0.98
UPF3AP1-201ENST00000413731 MAGEF1Q9HAY2 307 aa8.92□□□□□ -0.98
UPF3AP1-201ENST00000413731 RCOR1Q9UKL0 485 aa8.92□□□□□ -0.98
UPF3AP1-201ENST00000413731 MAFFQ9ULX9 164 aa8.92□□□□□ -0.98
UPF3AP1-201ENST00000413731 GOLGA6L4A6NEF3 574 aa8.91□□□□□ -0.98
UPF3AP1-201ENST00000413731 MYMKA6NI61 221 aa8.91□□□□□ -0.98
UPF3AP1-201ENST00000413731 TM4SF5O14894 197 aa8.91□□□□□ -0.98
UPF3AP1-201ENST00000413731 HNRNPDLO14979 420 aaKnown RBP8.91□□□□□ -0.98
UPF3AP1-201ENST00000413731 POLR2DO15514 142 aaKnown RBP8.91□□□□□ -0.98
UPF3AP1-201ENST00000413731 RPP40O75818 363 aaKnown RBP8.91□□□□□ -0.98
UPF3AP1-201ENST00000413731 OAZ2O95190 189 aa8.91□□□□□ -0.98
UPF3AP1-201ENST00000413731 MAPTP10636 758 aaKnown RBP8.91□□□□□ -0.98
UPF3AP1-201ENST00000413731 PFKFB1P16118 471 aa8.91□□□□□ -0.98
UPF3AP1-201ENST00000413731 GABRR2P28476 465 aa8.91□□□□□ -0.98
UPF3AP1-201ENST00000413731 LRPAP1P30533 357 aa8.91□□□□□ -0.98
UPF3AP1-201ENST00000413731 HOXA6P31267 233 aa8.91□□□□□ -0.98
UPF3AP1-201ENST00000413731 TNFSF9P41273 254 aa8.91□□□□□ -0.98
UPF3AP1-201ENST00000413731 AARSP49588 968 aaKnown RBP eCLIP8.91□□□□□ -0.98
UPF3AP1-201ENST00000413731 CDR1P51861 262 aa8.91□□□□□ -0.98
UPF3AP1-201ENST00000413731 ZNF131P52739 623 aa8.91□□□□□ -0.98
UPF3AP1-201ENST00000413731 EPHB3P54753 998 aa8.91□□□□□ -0.98
UPF3AP1-201ENST00000413731 NCKAP1LP55160 1127 aa8.91□□□□□ -0.98
UPF3AP1-201ENST00000413731 ASIC1P78348 528 aa8.91□□□□□ -0.98
UPF3AP1-201ENST00000413731 SHC2P98077 582 aa8.91□□□□□ -0.98
UPF3AP1-201ENST00000413731 ARHGAP29Q52LW3 1261 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms