RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 DCP1BQ8IZD4 617 aaKnown RBP10.29□□□□□ -0.76
RFFL-203ENST00000413582 THEM5Q8N1Q8 247 aa10.29□□□□□ -0.76
RFFL-203ENST00000413582 TTC16Q8NEE8 873 aa10.29□□□□□ -0.76
RFFL-203ENST00000413582 CCDC26Q8TAB7 109 aa10.29□□□□□ -0.76
RFFL-203ENST00000413582 SH3RF2Q8TEC5 729 aa10.29□□□□□ -0.76
RFFL-203ENST00000413582 RNF25Q96BH1 459 aaPredicted RBP10.29□□□□□ -0.76
RFFL-203ENST00000413582 TRMT2BQ96GJ1 504 aaKnown RBP10.29□□□□□ -0.76
RFFL-203ENST00000413582 MYRFLQ96LU7 910 aa10.29□□□□□ -0.76
RFFL-203ENST00000413582 FNBP1Q96RU3 617 aa10.29□□□□□ -0.76
RFFL-203ENST00000413582 PI4K2AQ9BTU6 479 aa10.29□□□□□ -0.76
RFFL-203ENST00000413582 MSTO1Q9BUK6 570 aa10.29□□□□□ -0.76
RFFL-203ENST00000413582 SLC32A1Q9H598 525 aa10.29□□□□□ -0.76
RFFL-203ENST00000413582 TRPC7Q9HCX4 862 aa10.29□□□□□ -0.76
RFFL-203ENST00000413582 ABCB6Q9NP58 842 aa10.29□□□□□ -0.76
RFFL-203ENST00000413582 GCNT4Q9P109 453 aa10.29□□□□□ -0.76
RFFL-203ENST00000413582 UXTQ9UBK9 157 aaPredicted RBP10.29□□□□□ -0.76
RFFL-203ENST00000413582 C2CD2Q9Y426 696 aa10.29□□□□□ -0.76
RFFL-203ENST00000413582 FLNBO75369 2602 aaKnown RBP10.29□□□□□ -0.76
RFFL-203ENST00000413582 HELZ2Q9BYK8 2649 aaKnown RBP10.28□□□□□ -0.76
RFFL-203ENST00000413582 UPK3BL1B0FP48 263 aa10.28□□□□□ -0.76
RFFL-203ENST00000413582 UPK3BL2E5RIL1 263 aa10.28□□□□□ -0.76
RFFL-203ENST00000413582 CAPNS1P04632 268 aa10.28□□□□□ -0.76
RFFL-203ENST00000413582 USP17L7P0C7H9 530 aa10.28□□□□□ -0.76
RFFL-203ENST00000413582 PLA2G4BP0C869 781 aa10.28□□□□□ -0.76
RFFL-203ENST00000413582 TCF3P15923 654 aa10.28□□□□□ -0.76
RFFL-203ENST00000413582 ENGP17813 658 aa10.28□□□□□ -0.76
RFFL-203ENST00000413582 PTGER3P43115 390 aa10.28□□□□□ -0.76
RFFL-203ENST00000413582 TSPY1Q01534 308 aa10.28□□□□□ -0.76
RFFL-203ENST00000413582 SEMA3BQ13214 749 aa10.28□□□□□ -0.76
RFFL-203ENST00000413582 GNL2Q13823 731 aaKnown RBP10.28□□□□□ -0.76
RFFL-203ENST00000413582 NFE2Q16621 373 aaPredicted RBP10.28□□□□□ -0.76
RFFL-203ENST00000413582 DDR2Q16832 855 aa10.28□□□□□ -0.76
RFFL-203ENST00000413582 CCDC142Q17RM4 750 aa10.28□□□□□ -0.76
RFFL-203ENST00000413582 TMEM119Q4V9L6 283 aa10.28□□□□□ -0.76
RFFL-203ENST00000413582 ZC2HC1CQ53FD0 456 aaPredicted RBP10.28□□□□□ -0.76
RFFL-203ENST00000413582 ARSHQ5FYA8 562 aa10.28□□□□□ -0.76
RFFL-203ENST00000413582 PEAR1Q5VY43 1037 aaPredicted RBP10.28□□□□□ -0.76
RFFL-203ENST00000413582 SLC23A3Q6PIS1 610 aa10.28□□□□□ -0.76
RFFL-203ENST00000413582 TMEM92Q6UXU6 159 aa10.28□□□□□ -0.76
RFFL-203ENST00000413582 ARMCX6Q7L4S7 300 aa10.28□□□□□ -0.76
RFFL-203ENST00000413582 LPCAT2Q7L5N7 544 aa10.28□□□□□ -0.76
RFFL-203ENST00000413582 PROSER1Q86XN7 944 aa10.28□□□□□ -0.76
RFFL-203ENST00000413582 SYT12Q8IV01 421 aa10.28□□□□□ -0.76
RFFL-203ENST00000413582 CCDC83Q8IWF9 413 aa10.28□□□□□ -0.76
RFFL-203ENST00000413582 CCDC33Q8N5R6 958 aa10.28□□□□□ -0.76
RFFL-203ENST00000413582 KCTD17Q8N5Z5 321 aa10.28□□□□□ -0.76
RFFL-203ENST00000413582 RLN3Q8WXF3 142 aa10.28□□□□□ -0.76
RFFL-203ENST00000413582 SPACA7Q96KW9 195 aa10.28□□□□□ -0.76
RFFL-203ENST00000413582 CYP2S1Q96SQ9 504 aa10.28□□□□□ -0.76
RFFL-203ENST00000413582 PKMYT1Q99640 499 aa10.28□□□□□ -0.76
RFFL-203ENST00000413582 REEP2Q9BRK0 252 aa10.28□□□□□ -0.76
RFFL-203ENST00000413582 NUSAP1Q9BXS6 441 aaKnown RBP10.28□□□□□ -0.76
RFFL-203ENST00000413582 ASB7Q9H672 318 aa10.28□□□□□ -0.76
RFFL-203ENST00000413582 TMEM74BQ9NUR3 256 aa10.28□□□□□ -0.76
RFFL-203ENST00000413582 ODF2LQ9ULJ1 636 aa10.28□□□□□ -0.76
RFFL-203ENST00000413582 ARHGAP26Q9UNA1 814 aa10.28□□□□□ -0.76
RFFL-203ENST00000413582 ATXN2Q99700 1313 aaKnown RBP10.28□□□□□ -0.76
RFFL-203ENST00000413582 ASXL3Q9C0F0 2248 aa10.27□□□□□ -0.76
RFFL-203ENST00000413582 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.27□□□□□ -0.77
RFFL-203ENST00000413582 FAM221BA6H8Z2 402 aa10.27□□□□□ -0.77
RFFL-203ENST00000413582 C2orf78A6NCI8 922 aa10.27□□□□□ -0.77
RFFL-203ENST00000413582 KPNA7A9QM74 516 aa10.27□□□□□ -0.77
RFFL-203ENST00000413582 TISP43B9A030 160 aa10.27□□□□□ -0.77
RFFL-203ENST00000413582 NFATC1O95644 943 aa10.27□□□□□ -0.77
RFFL-203ENST00000413582 SCP2P22307 547 aa10.27□□□□□ -0.77
RFFL-203ENST00000413582 CYP2F1P24903 491 aa10.27□□□□□ -0.77
RFFL-203ENST00000413582 ACOT2P49753 483 aa10.27□□□□□ -0.77
RFFL-203ENST00000413582 ZNF131P52739 623 aa10.27□□□□□ -0.77
RFFL-203ENST00000413582 RPL10AP62906 217 aaKnown RBP10.27□□□□□ -0.77
RFFL-203ENST00000413582 MESP2Q0VG99 397 aa10.27□□□□□ -0.77
RFFL-203ENST00000413582 NR1H3Q13133 447 aa10.27□□□□□ -0.77
RFFL-203ENST00000413582 KCNB1Q14721 858 aa10.27□□□□□ -0.77
RFFL-203ENST00000413582 SV2CQ496J9 727 aa10.27□□□□□ -0.77
RFFL-203ENST00000413582 INTS6LQ5JSJ4 861 aaKnown RBP10.27□□□□□ -0.77
RFFL-203ENST00000413582 LYSMD4Q5XG99 296 aa10.27□□□□□ -0.77
RFFL-203ENST00000413582 DTHD1Q6ZMT9 781 aa10.27□□□□□ -0.77
RFFL-203ENST00000413582 SFTPA1Q8IWL2 248 aa10.27□□□□□ -0.77
RFFL-203ENST00000413582 TMEFF1Q8IYR6 380 aa10.27□□□□□ -0.77
RFFL-203ENST00000413582 PDCL2Q8N4E4 241 aa10.27□□□□□ -0.77
RFFL-203ENST00000413582 FRMD1Q8N878 549 aa10.27□□□□□ -0.77
RFFL-203ENST00000413582 ARL14EPQ8N8R7 260 aaPredicted RBP10.27□□□□□ -0.77
RFFL-203ENST00000413582 WHAMMQ8TF30 809 aa10.27□□□□□ -0.77
RFFL-203ENST00000413582 ZNF560Q96MR9 790 aa10.27□□□□□ -0.77
RFFL-203ENST00000413582 FIZ1Q96SL8 496 aa10.27□□□□□ -0.77
RFFL-203ENST00000413582 PLIN2Q99541 437 aa10.27□□□□□ -0.77
RFFL-203ENST00000413582 LLPHQ9BRT6 129 aaKnown RBP10.27□□□□□ -0.77
RFFL-203ENST00000413582 LINC00597Q9H2U6 94 aa10.27□□□□□ -0.77
RFFL-203ENST00000413582 FSCN3Q9NQT6 498 aa10.27□□□□□ -0.77
RFFL-203ENST00000413582 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.27□□□□□ -0.77
RFFL-203ENST00000413582 DPP3Q9NY33 737 aa10.27□□□□□ -0.77
RFFL-203ENST00000413582 MBD1Q9UIS9 605 aaPredicted RBP10.27□□□□□ -0.77
RFFL-203ENST00000413582 PILRBQ9UKJ0 227 aa10.27□□□□□ -0.77
RFFL-203ENST00000413582 L1RE1Q9UN81 338 aa10.27□□□□□ -0.77
RFFL-203ENST00000413582 GPSM3Q9Y4H4 160 aa10.27□□□□□ -0.77
RFFL-203ENST00000413582 CELSR3Q9NYQ7 3312 aa10.27□□□□□ -0.77
RFFL-203ENST00000413582 PLXNB3Q9ULL4 1909 aa10.27□□□□□ -0.77
RFFL-203ENST00000413582 H0Y626 953 aa10.26□□□□□ -0.77
RFFL-203ENST00000413582 SGK1O00141 431 aa10.26□□□□□ -0.77
RFFL-203ENST00000413582 ALDH1A2O94788 518 aa10.26□□□□□ -0.77
RFFL-203ENST00000413582 TRIM16O95361 564 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms