RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 VTNP04004 478 aa5.85□□□□□ -1.47
LINC00342-201ENST00000412393 P4HBP07237 508 aaKnown RBP5.85□□□□□ -1.47
LINC00342-201ENST00000412393 STAG3L1P0CL83 205 aa5.85□□□□□ -1.47
LINC00342-201ENST00000412393 CCDC192P0DO97 292 aa5.85□□□□□ -1.47
LINC00342-201ENST00000412393 CDK11BP21127 795 aaKnown RBP5.85□□□□□ -1.47
LINC00342-201ENST00000412393 CYP3A7P24462 503 aa5.85□□□□□ -1.47
LINC00342-201ENST00000412393 CBX1P83916 185 aa5.85□□□□□ -1.47
LINC00342-201ENST00000412393 PRKCEQ02156 737 aa5.85□□□□□ -1.47
LINC00342-201ENST00000412393 NCBP1Q09161 790 aaKnown RBP5.85□□□□□ -1.47
LINC00342-201ENST00000412393 GPM6BQ13491 265 aa5.85□□□□□ -1.47
LINC00342-201ENST00000412393 ME3Q16798 604 aa5.85□□□□□ -1.47
LINC00342-201ENST00000412393 AAK1Q2M2I8 961 aa5.85□□□□□ -1.47
LINC00342-201ENST00000412393 TMEM266Q2M3C6 531 aa5.85□□□□□ -1.47
LINC00342-201ENST00000412393 LETM2Q2VYF4 491 aa5.85□□□□□ -1.47
LINC00342-201ENST00000412393 EPC2Q52LR7 807 aa5.85□□□□□ -1.47
LINC00342-201ENST00000412393 DNTTIP2Q5QJE6 756 aaKnown RBP5.85□□□□□ -1.47
LINC00342-201ENST00000412393 ODR4Q5SWX8 454 aa5.85□□□□□ -1.47
LINC00342-201ENST00000412393 HLA-DQA1Q5Y7H0 255 aa5.85□□□□□ -1.47
LINC00342-201ENST00000412393 EFCAB12Q6NXP0 572 aa5.85□□□□□ -1.47
LINC00342-201ENST00000412393 NEK8Q86SG6 692 aa5.85□□□□□ -1.47
LINC00342-201ENST00000412393 TMEM192Q8IY95 271 aa5.85□□□□□ -1.47
LINC00342-201ENST00000412393 METTL13Q8N6R0 699 aa5.85□□□□□ -1.47
LINC00342-201ENST00000412393 NECAB1Q8N987 351 aa5.85□□□□□ -1.47
LINC00342-201ENST00000412393 RDM1Q8NG50 284 aa5.85□□□□□ -1.47
LINC00342-201ENST00000412393 KIF18AQ8NI77 898 aa5.85□□□□□ -1.47
LINC00342-201ENST00000412393 WASF1Q92558 559 aa5.85□□□□□ -1.47
LINC00342-201ENST00000412393 MBOAT7Q96N66 472 aa5.85□□□□□ -1.47
LINC00342-201ENST00000412393 PHF20Q9BVI0 1012 aa5.85□□□□□ -1.47
LINC00342-201ENST00000412393 CDADC1Q9BWV3 514 aa5.85□□□□□ -1.47
LINC00342-201ENST00000412393 TTC12Q9H892 705 aaPredicted RBP5.85□□□□□ -1.47
LINC00342-201ENST00000412393 NRBP2Q9NSY0 501 aa5.85□□□□□ -1.47
LINC00342-201ENST00000412393 GJB4Q9NTQ9 266 aa5.85□□□□□ -1.47
LINC00342-201ENST00000412393 BCCIPQ9P287 314 aaKnown RBP eCLIP5.85□□□□□ -1.47
LINC00342-201ENST00000412393 DDX25Q9UHL0 483 aaKnown RBP5.85□□□□□ -1.47
LINC00342-201ENST00000412393 COG5Q9UP83 839 aa5.85□□□□□ -1.47
LINC00342-201ENST00000412393 LIMCH1Q9UPQ0 1083 aa5.85□□□□□ -1.47
LINC00342-201ENST00000412393 NOC2LQ9Y3T9 749 aaKnown RBP5.85□□□□□ -1.47
LINC00342-201ENST00000412393 A0A0C4DFX4 3053 aa5.84□□□□□ -1.47
LINC00342-201ENST00000412393 H3BNC9 293 aa5.84□□□□□ -1.47
LINC00342-201ENST00000412393 STX6O43752 255 aa5.84□□□□□ -1.47
LINC00342-201ENST00000412393 SLC37A4O43826 429 aa5.84□□□□□ -1.47
LINC00342-201ENST00000412393 MARCH6O60337 910 aa5.84□□□□□ -1.47
LINC00342-201ENST00000412393 DGKIO75912 1065 aa5.84□□□□□ -1.47
LINC00342-201ENST00000412393 F13A1P00488 732 aa5.84□□□□□ -1.47
LINC00342-201ENST00000412393 RB1P06400 928 aa5.84□□□□□ -1.47
LINC00342-201ENST00000412393 DBHP09172 617 aa5.84□□□□□ -1.47
LINC00342-201ENST00000412393 FDPSP14324 419 aaKnown RBP5.84□□□□□ -1.47
LINC00342-201ENST00000412393 GCFC2P16383 781 aaKnown RBP5.84□□□□□ -1.47
LINC00342-201ENST00000412393 IBSPP21815 317 aaPredicted RBP5.84□□□□□ -1.47
LINC00342-201ENST00000412393 TMOD1P28289 359 aa5.84□□□□□ -1.47
LINC00342-201ENST00000412393 CTNNB1P35222 781 aa5.84□□□□□ -1.47
LINC00342-201ENST00000412393 KRT2P35908 639 aa5.84□□□□□ -1.47
LINC00342-201ENST00000412393 CLCN3P51790 818 aa5.84□□□□□ -1.47
LINC00342-201ENST00000412393 CRYBB1P53674 252 aaPredicted RBP5.84□□□□□ -1.47
LINC00342-201ENST00000412393 CORO7P57737 925 aa5.84□□□□□ -1.47
LINC00342-201ENST00000412393 TFF2Q03403 129 aa5.84□□□□□ -1.47
LINC00342-201ENST00000412393 MPP2Q14168 576 aa5.84□□□□□ -1.47
LINC00342-201ENST00000412393 BTG3Q14201 252 aaPredicted RBP5.84□□□□□ -1.47
LINC00342-201ENST00000412393 UGCGQ16739 394 aa5.84□□□□□ -1.47
LINC00342-201ENST00000412393 PTPROQ16827 1216 aa5.84□□□□□ -1.47
LINC00342-201ENST00000412393 KIZQ2M2Z5 673 aa5.84□□□□□ -1.47
LINC00342-201ENST00000412393 MTERF2Q49AM1 385 aa5.84□□□□□ -1.47
LINC00342-201ENST00000412393 XKR3Q5GH77 459 aa5.84□□□□□ -1.47
LINC00342-201ENST00000412393 B3GNT9Q6UX72 402 aa5.84□□□□□ -1.47
LINC00342-201ENST00000412393 FAM43BQ6ZT52 329 aaPredicted RBP5.84□□□□□ -1.47
LINC00342-201ENST00000412393 PIK3AP1Q6ZUJ8 805 aa5.84□□□□□ -1.47
LINC00342-201ENST00000412393 B3GNT8Q7Z7M8 397 aa5.84□□□□□ -1.47
LINC00342-201ENST00000412393 LRRC71Q8N4P6 559 aa5.84□□□□□ -1.47
LINC00342-201ENST00000412393 ETNPPLQ8TBG4 499 aa5.84□□□□□ -1.47
LINC00342-201ENST00000412393 DDX1Q92499 740 aaKnown RBP5.84□□□□□ -1.47
LINC00342-201ENST00000412393 GTF3C6Q969F1 213 aa5.84□□□□□ -1.47
LINC00342-201ENST00000412393 ZNF689Q96CS4 500 aaPredicted RBP5.84□□□□□ -1.47
LINC00342-201ENST00000412393 MRPL38Q96DV4 380 aaKnown RBP5.84□□□□□ -1.47
LINC00342-201ENST00000412393 MRFAP1L1Q96HT8 127 aa5.84□□□□□ -1.47
LINC00342-201ENST00000412393 LOXL4Q96JB6 756 aa5.84□□□□□ -1.47
LINC00342-201ENST00000412393 FAM20AQ96MK3 541 aa5.84□□□□□ -1.47
LINC00342-201ENST00000412393 C8orf49Q96NF6 230 aa5.84□□□□□ -1.47
LINC00342-201ENST00000412393 NAP1L4Q99733 375 aaKnown RBP5.84□□□□□ -1.47
LINC00342-201ENST00000412393 ADAM2Q99965 735 aa5.84□□□□□ -1.47
LINC00342-201ENST00000412393 TMX1Q9H3N1 280 aa5.84□□□□□ -1.47
LINC00342-201ENST00000412393 BRMS1Q9HCU9 246 aa5.84□□□□□ -1.47
LINC00342-201ENST00000412393 ERVK-5Q9HDB9 667 aa5.84□□□□□ -1.47
LINC00342-201ENST00000412393 NTMQ9P121 344 aa5.84□□□□□ -1.47
LINC00342-201ENST00000412393 CALCOCO1Q9P1Z2 691 aa5.84□□□□□ -1.47
LINC00342-201ENST00000412393 ST3GAL5Q9UNP4 418 aa5.84□□□□□ -1.47
LINC00342-201ENST00000412393 AKT3Q9Y243 479 aa5.84□□□□□ -1.47
LINC00342-201ENST00000412393 RWDD3Q9Y3V2 267 aa5.84□□□□□ -1.47
LINC00342-201ENST00000412393 REV3LO60673 3130 aa5.84□□□□□ -1.47
LINC00342-201ENST00000412393 A0A1B0GTL3 188 aa5.83□□□□□ -1.48
LINC00342-201ENST00000412393 A0A1W2PQJ5 194 aa5.83□□□□□ -1.48
LINC00342-201ENST00000412393 DENND3A2RUS2 1198 aa5.83□□□□□ -1.48
LINC00342-201ENST00000412393 C5orf67F2Z3F1 127 aa5.83□□□□□ -1.48
LINC00342-201ENST00000412393 TBX3O15119 743 aa5.83□□□□□ -1.48
LINC00342-201ENST00000412393 AP5Z1O43299 807 aa5.83□□□□□ -1.48
LINC00342-201ENST00000412393 MGEA5O60502 916 aa5.83□□□□□ -1.48
LINC00342-201ENST00000412393 CCNT1O60563 726 aaKnown RBP5.83□□□□□ -1.48
LINC00342-201ENST00000412393 JAK2O60674 1132 aa5.83□□□□□ -1.48
LINC00342-201ENST00000412393 DKC1O60832 514 aaKnown RBP eCLIP5.83□□□□□ -1.48
LINC00342-201ENST00000412393 GPR32O75388 356 aa5.83□□□□□ -1.48
LINC00342-201ENST00000412393 STBD1O95210 358 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms