RNA–Protein interactions for RNA: ENST00000410466.1

RNU6-554P-201, Transcript of RNA, U6 small nuclear 554, pseudogene, humanhuman

BASIC

Gene RNU6-554P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-554P-201ENST00000410466 PHF21BQ96EK2 531 aa1.19□□□□□ -2.22
RNU6-554P-201ENST00000410466 CYFIP2Q96F07 1278 aa1.19□□□□□ -2.22
RNU6-554P-201ENST00000410466 RNPC3Q96LT9 517 aaKnown RBP1.19□□□□□ -2.22
RNU6-554P-201ENST00000410466 ORAI3Q9BRQ5 295 aa1.19□□□□□ -2.22
RNU6-554P-201ENST00000410466 TRAIPQ9BWF2 469 aa1.19□□□□□ -2.22
RNU6-554P-201ENST00000410466 CDT1Q9H211 546 aa1.19□□□□□ -2.22
RNU6-554P-201ENST00000410466 RETREG1Q9H6L5 497 aa1.19□□□□□ -2.22
RNU6-554P-201ENST00000410466 MRPS18AQ9NVS2 196 aaKnown RBP1.19□□□□□ -2.22
RNU6-554P-201ENST00000410466 IFT57Q9NWB7 429 aa1.19□□□□□ -2.22
RNU6-554P-201ENST00000410466 ZNF318Q5VUA4 2279 aa1.19□□□□□ -2.22
RNU6-554P-201ENST00000410466 TTBK1Q5TCY1 1321 aaPredicted RBP1.18□□□□□ -2.22
RNU6-554P-201ENST00000410466 KDM1AO60341 852 aa1.18□□□□□ -2.22
RNU6-554P-201ENST00000410466 ZG16O60844 167 aa1.18□□□□□ -2.22
RNU6-554P-201ENST00000410466 GAS7O60861 476 aa1.18□□□□□ -2.22
RNU6-554P-201ENST00000410466 ZC3H11AO75152 810 aaKnown RBP eCLIP1.18□□□□□ -2.22
RNU6-554P-201ENST00000410466 TJP3O95049 919 aa1.18□□□□□ -2.22
RNU6-554P-201ENST00000410466 NDUFB8O95169 186 aa1.18□□□□□ -2.22
RNU6-554P-201ENST00000410466 EPN2O95208 641 aa1.18□□□□□ -2.22
RNU6-554P-201ENST00000410466 ASLP04424 464 aa1.18□□□□□ -2.22
RNU6-554P-201ENST00000410466 FESP07332 822 aa1.18□□□□□ -2.22
RNU6-554P-201ENST00000410466 FGRP09769 529 aa1.18□□□□□ -2.22
RNU6-554P-201ENST00000410466 MTHFD1P11586 935 aaKnown RBP1.18□□□□□ -2.22
RNU6-554P-201ENST00000410466 LSP1P33241 339 aa1.18□□□□□ -2.22
RNU6-554P-201ENST00000410466 FLT3P36888 993 aa1.18□□□□□ -2.22
RNU6-554P-201ENST00000410466 CPA2P48052 419 aa1.18□□□□□ -2.22
RNU6-554P-201ENST00000410466 POLD2P49005 469 aa1.18□□□□□ -2.22
RNU6-554P-201ENST00000410466 LMAN2Q12907 356 aa1.18□□□□□ -2.22
RNU6-554P-201ENST00000410466 RASGRF1Q13972 1273 aa1.18□□□□□ -2.22
RNU6-554P-201ENST00000410466 PTGR1Q14914 329 aa1.18□□□□□ -2.22
RNU6-554P-201ENST00000410466 L1TD1Q5T7N2 865 aaKnown RBP1.18□□□□□ -2.22
RNU6-554P-201ENST00000410466 VPS53Q5VIR6 699 aa1.18□□□□□ -2.22
RNU6-554P-201ENST00000410466 MTHFD1LQ6UB35 978 aa1.18□□□□□ -2.22
RNU6-554P-201ENST00000410466 SLC30A10Q6XR72 485 aa1.18□□□□□ -2.22
RNU6-554P-201ENST00000410466 FRMD7Q6ZUT3 714 aa1.18□□□□□ -2.22
RNU6-554P-201ENST00000410466 UBE2R2Q712K3 238 aaPredicted RBP1.18□□□□□ -2.22
RNU6-554P-201ENST00000410466 LIX1LQ8IVB5 337 aa1.18□□□□□ -2.22
RNU6-554P-201ENST00000410466 WDSUB1Q8N9V3 476 aa1.18□□□□□ -2.22
RNU6-554P-201ENST00000410466 SLC17A8Q8NDX2 589 aa1.18□□□□□ -2.22
RNU6-554P-201ENST00000410466 TMIEQ8NEW7 156 aa1.18□□□□□ -2.22
RNU6-554P-201ENST00000410466 CCHCR1Q8TD31 782 aa1.18□□□□□ -2.22
RNU6-554P-201ENST00000410466 CCDC17Q96LX7 622 aa1.18□□□□□ -2.22
RNU6-554P-201ENST00000410466 THAP7Q9BT49 309 aaPredicted RBP1.18□□□□□ -2.22
RNU6-554P-201ENST00000410466 PACSIN1Q9BY11 444 aa1.18□□□□□ -2.22
RNU6-554P-201ENST00000410466 MS4A5Q9H3V2 200 aa1.18□□□□□ -2.22
RNU6-554P-201ENST00000410466 RBM12Q9NTZ6 932 aaKnown RBP1.18□□□□□ -2.22
RNU6-554P-201ENST00000410466 TMEM272A0A1B0GTI8 110 aa1.17□□□□□ -2.22
RNU6-554P-201ENST00000410466 DNAJC8O75937 253 aaPredicted RBP1.17□□□□□ -2.22
RNU6-554P-201ENST00000410466 APOHP02749 345 aaPredicted RBP1.17□□□□□ -2.22
RNU6-554P-201ENST00000410466 DLDP09622 509 aaKnown RBP1.17□□□□□ -2.22
RNU6-554P-201ENST00000410466 RNF224P0DH78 156 aa1.17□□□□□ -2.22
RNU6-554P-201ENST00000410466 DDCP20711 480 aa1.17□□□□□ -2.22
RNU6-554P-201ENST00000410466 SOX8P57073 446 aa1.17□□□□□ -2.22
RNU6-554P-201ENST00000410466 CDK17Q00537 523 aa1.17□□□□□ -2.22
RNU6-554P-201ENST00000410466 STIM1Q13586 685 aa1.17□□□□□ -2.22
RNU6-554P-201ENST00000410466 ZNF460Q14592 562 aa1.17□□□□□ -2.22
RNU6-554P-201ENST00000410466 ZRSR1Q15695 479 aaKnown RBP1.17□□□□□ -2.22
RNU6-554P-201ENST00000410466 C4orf46Q504U0 113 aa1.17□□□□□ -2.22
RNU6-554P-201ENST00000410466 INO80DQ53TQ3 878 aaPredicted RBP1.17□□□□□ -2.22
RNU6-554P-201ENST00000410466 WBP2NLQ6ICG8 309 aa1.17□□□□□ -2.22
RNU6-554P-201ENST00000410466 TRILQ7L0X0 811 aa1.17□□□□□ -2.22
RNU6-554P-201ENST00000410466 UBE2Q1Q7Z7E8 422 aa1.17□□□□□ -2.22
RNU6-554P-201ENST00000410466 AOPEPQ8N6M6 819 aa1.17□□□□□ -2.22
RNU6-554P-201ENST00000410466 SMOC2Q9H3U7 446 aa1.17□□□□□ -2.22
RNU6-554P-201ENST00000410466 SDF2L1Q9HCN8 221 aa1.17□□□□□ -2.22
RNU6-554P-201ENST00000410466 JKAMPQ9P055 326 aa1.17□□□□□ -2.22
RNU6-554P-201ENST00000410466 DPP7Q9UHL4 492 aa1.17□□□□□ -2.22
RNU6-554P-201ENST00000410466 PRO0461Q9UI25 63 aa1.17□□□□□ -2.22
RNU6-554P-201ENST00000410466 MYO6Q9UM54 1294 aa1.17□□□□□ -2.22
RNU6-554P-201ENST00000410466 EDARQ9UNE0 448 aa1.17□□□□□ -2.22
RNU6-554P-201ENST00000410466 PRRC2AP48634 2157 aaKnown RBP1.17□□□□□ -2.22
RNU6-554P-201ENST00000410466 GRM6O15303 877 aa1.16□□□□□ -2.22
RNU6-554P-201ENST00000410466 SLC16A5O15375 505 aa1.16□□□□□ -2.22
RNU6-554P-201ENST00000410466 TGM5O43548 720 aa1.16□□□□□ -2.22
RNU6-554P-201ENST00000410466 EXTL3O43909 919 aa1.16□□□□□ -2.22
RNU6-554P-201ENST00000410466 RAB11FIP3O75154 756 aa1.16□□□□□ -2.22
RNU6-554P-201ENST00000410466 AMY1AP04745 511 aa1.16□□□□□ -2.22
RNU6-554P-201ENST00000410466 JMJD7P0C870 316 aa1.16□□□□□ -2.22
RNU6-554P-201ENST00000410466 FPR3P25089 353 aa1.16□□□□□ -2.22
RNU6-554P-201ENST00000410466 CCT2P78371 535 aaKnown RBP1.16□□□□□ -2.22
RNU6-554P-201ENST00000410466 HSF1Q00613 529 aa1.16□□□□□ -2.22
RNU6-554P-201ENST00000410466 ADRM1Q16186 407 aa1.16□□□□□ -2.22
RNU6-554P-201ENST00000410466 ANO6Q4KMQ2 910 aa1.16□□□□□ -2.22
RNU6-554P-201ENST00000410466 MUM1L1Q5H9M0 696 aa1.16□□□□□ -2.22
RNU6-554P-201ENST00000410466 C9orf57Q5W0N0 161 aa1.16□□□□□ -2.22
RNU6-554P-201ENST00000410466 TAF2Q6P1X5 1199 aa1.16□□□□□ -2.22
RNU6-554P-201ENST00000410466 ZNF365Q70YC5 407 aa1.16□□□□□ -2.22
RNU6-554P-201ENST00000410466 TRAPPC11Q7Z392 1133 aa1.16□□□□□ -2.22
RNU6-554P-201ENST00000410466 BCDIN3DQ7Z5W3 292 aaKnown RBP1.16□□□□□ -2.22
RNU6-554P-201ENST00000410466 PSD4Q8NDX1 1056 aa1.16□□□□□ -2.22
RNU6-554P-201ENST00000410466 CHTF18Q8WVB6 975 aa1.16□□□□□ -2.22
RNU6-554P-201ENST00000410466 XAGE5Q8WWM1 108 aa1.16□□□□□ -2.22
RNU6-554P-201ENST00000410466 LENG8Q96PV6 779 aaPredicted RBP1.16□□□□□ -2.22
RNU6-554P-201ENST00000410466 GREM2Q9H772 168 aa1.16□□□□□ -2.22
RNU6-554P-201ENST00000410466 GLOD4Q9HC38 313 aa1.16□□□□□ -2.22
RNU6-554P-201ENST00000410466 HIF1ANQ9NWT6 349 aa1.16□□□□□ -2.22
RNU6-554P-201ENST00000410466 THG1LQ9NWX6 298 aaKnown RBP1.16□□□□□ -2.22
RNU6-554P-201ENST00000410466 COG5Q9UP83 839 aa1.16□□□□□ -2.22
RNU6-554P-201ENST00000410466 MSRB2Q9Y3D2 182 aa1.16□□□□□ -2.22
RNU6-554P-201ENST00000410466 KDM2BQ8NHM5 1336 aa1.15□□□□□ -2.22
RNU6-554P-201ENST00000410466 CCDC163A0A0D9SF12 145 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms