RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 RPAP2Q8IXW5 612 aaPredicted RBP5.49□□□□□ -1.53
LSM5-205ENST00000409952 CARFQ8N187 725 aa5.49□□□□□ -1.53
LSM5-205ENST00000409952 TTLL6Q8N841 843 aa5.49□□□□□ -1.53
LSM5-205ENST00000409952 PCSK9Q8NBP7 692 aaKnown RBP5.49□□□□□ -1.53
LSM5-205ENST00000409952 CSGALNACT1Q8TDX6 532 aa5.49□□□□□ -1.53
LSM5-205ENST00000409952 SSH3Q8TE77 659 aa5.49□□□□□ -1.53
LSM5-205ENST00000409952 ATP2A3Q93084 1043 aa5.49□□□□□ -1.53
LSM5-205ENST00000409952 SPSB4Q96A44 273 aa5.49□□□□□ -1.53
LSM5-205ENST00000409952 VMP1Q96GC9 406 aa5.49□□□□□ -1.53
LSM5-205ENST00000409952 WDR92Q96MX6 357 aa5.49□□□□□ -1.53
LSM5-205ENST00000409952 REEP2Q9BRK0 252 aa5.49□□□□□ -1.53
LSM5-205ENST00000409952 ZCCHC4Q9H5U6 513 aa5.49□□□□□ -1.53
LSM5-205ENST00000409952 SAE1Q9UBE0 346 aaPredicted RBP5.49□□□□□ -1.53
LSM5-205ENST00000409952 ACAD8Q9UKU7 415 aa5.49□□□□□ -1.53
LSM5-205ENST00000409952 RRP7AQ9Y3A4 280 aaKnown RBP5.49□□□□□ -1.53
LSM5-205ENST00000409952 DTNAQ9Y4J8 743 aa5.49□□□□□ -1.53
LSM5-205ENST00000409952 A0A1B0GTL3 188 aa5.48□□□□□ -1.53
LSM5-205ENST00000409952 OTOL1A6NHN0 477 aaPredicted RBP5.48□□□□□ -1.53
LSM5-205ENST00000409952 H0Y858 1186 aa5.48□□□□□ -1.53
LSM5-205ENST00000409952 H7C0S8 307 aa5.48□□□□□ -1.53
LSM5-205ENST00000409952 PCDH17O14917 1159 aa5.48□□□□□ -1.53
LSM5-205ENST00000409952 SPTLC2O15270 562 aa5.48□□□□□ -1.53
LSM5-205ENST00000409952 DNPH1O43598 174 aa5.48□□□□□ -1.53
LSM5-205ENST00000409952 GASTP01350 101 aa5.48□□□□□ -1.53
LSM5-205ENST00000409952 ACADMP11310 421 aa5.48□□□□□ -1.53
LSM5-205ENST00000409952 BTF3P20290 206 aaKnown RBP5.48□□□□□ -1.53
LSM5-205ENST00000409952 RPL13P26373 211 aaKnown RBP5.48□□□□□ -1.53
LSM5-205ENST00000409952 SLC11A2P49281 568 aa5.48□□□□□ -1.53
LSM5-205ENST00000409952 WNT3AP56704 352 aa5.48□□□□□ -1.53
LSM5-205ENST00000409952 NKX3-2P78367 333 aa5.48□□□□□ -1.53
LSM5-205ENST00000409952 MXRA7P84157 204 aa5.48□□□□□ -1.53
LSM5-205ENST00000409952 PLIN5Q00G26 463 aa5.48□□□□□ -1.53
LSM5-205ENST00000409952 CD83Q01151 205 aa5.48□□□□□ -1.53
LSM5-205ENST00000409952 CDC16Q13042 620 aa5.48□□□□□ -1.53
LSM5-205ENST00000409952 BECN1Q14457 450 aa5.48□□□□□ -1.53
LSM5-205ENST00000409952 SLC29A2Q14542 456 aa5.48□□□□□ -1.53
LSM5-205ENST00000409952 SMAD1Q15797 465 aaKnown RBP5.48□□□□□ -1.53
LSM5-205ENST00000409952 BAK1Q16611 211 aa5.48□□□□□ -1.53
LSM5-205ENST00000409952 ATP2B3Q16720 1220 aa5.48□□□□□ -1.53
LSM5-205ENST00000409952 RILPL1Q5EBL4 403 aa5.48□□□□□ -1.53
LSM5-205ENST00000409952 SNX30Q5VWJ9 437 aa5.48□□□□□ -1.53
LSM5-205ENST00000409952 RAP1GAP2Q684P5 730 aa5.48□□□□□ -1.53
LSM5-205ENST00000409952 GRAMD4Q6IC98 578 aa5.48□□□□□ -1.53
LSM5-205ENST00000409952 CXXC5Q7LFL8 322 aaKnown RBP5.48□□□□□ -1.53
LSM5-205ENST00000409952 R3HCC1LQ7Z5L2 792 aaKnown RBP5.48□□□□□ -1.53
LSM5-205ENST00000409952 ARMC8Q8IUR7 673 aa5.48□□□□□ -1.53
LSM5-205ENST00000409952 CCDC28AQ8IWP9 274 aa5.48□□□□□ -1.53
LSM5-205ENST00000409952 SLC15A4Q8N697 577 aa5.48□□□□□ -1.53
LSM5-205ENST00000409952 USP38Q8NB14 1042 aa5.48□□□□□ -1.53
LSM5-205ENST00000409952 PIK3C3Q8NEB9 887 aa5.48□□□□□ -1.53
LSM5-205ENST00000409952 GOLGA1Q92805 767 aa5.48□□□□□ -1.53
LSM5-205ENST00000409952 ZBTB8AQ96BR9 441 aa5.48□□□□□ -1.53
LSM5-205ENST00000409952 RNF125Q96EQ8 232 aa5.48□□□□□ -1.53
LSM5-205ENST00000409952 ABHD16BQ9H3Z7 469 aa5.48□□□□□ -1.53
LSM5-205ENST00000409952 ACAD9Q9H845 621 aa5.48□□□□□ -1.53
LSM5-205ENST00000409952 G6PC2Q9NQR9 355 aa5.48□□□□□ -1.53
LSM5-205ENST00000409952 TLR9Q9NR96 1032 aa5.48□□□□□ -1.53
LSM5-205ENST00000409952 RLIMQ9NVW2 624 aa5.48□□□□□ -1.53
LSM5-205ENST00000409952 GPRC5DQ9NZD1 345 aa5.48□□□□□ -1.53
LSM5-205ENST00000409952 CFAP97Q9P2B7 532 aa5.48□□□□□ -1.53
LSM5-205ENST00000409952 ADD3Q9UEY8 706 aaKnown RBP5.48□□□□□ -1.53
LSM5-205ENST00000409952 MAGEL2Q9UJ55 1249 aa5.48□□□□□ -1.53
LSM5-205ENST00000409952 CAPN11Q9UMQ6 739 aa5.48□□□□□ -1.53
LSM5-205ENST00000409952 PLEKHM1Q9Y4G2 1056 aa5.48□□□□□ -1.53
LSM5-205ENST00000409952 PRSS29PA6NIE9 313 aa5.47□□□□□ -1.53
LSM5-205ENST00000409952 MYO1CO00159 1063 aa5.47□□□□□ -1.53
LSM5-205ENST00000409952 RAB27BO00194 218 aa5.47□□□□□ -1.53
LSM5-205ENST00000409952 TEX33O43247 280 aa5.47□□□□□ -1.53
LSM5-205ENST00000409952 NOBOXO60393 691 aa5.47□□□□□ -1.53
LSM5-205ENST00000409952 TSPAN3O60637 253 aa5.47□□□□□ -1.53
LSM5-205ENST00000409952 MTA2O94776 668 aa5.47□□□□□ -1.53
LSM5-205ENST00000409952 SASH1O94885 1247 aa5.47□□□□□ -1.53
LSM5-205ENST00000409952 UNC5CO95185 931 aa5.47□□□□□ -1.53
LSM5-205ENST00000409952 GNAI2P04899 355 aa5.47□□□□□ -1.53
LSM5-205ENST00000409952 APOA4P06727 396 aa5.47□□□□□ -1.53
LSM5-205ENST00000409952 GRPP07492 148 aa5.47□□□□□ -1.53
LSM5-205ENST00000409952 CKBP12277 381 aa5.47□□□□□ -1.53
LSM5-205ENST00000409952 IL2RBP14784 551 aa5.47□□□□□ -1.53
LSM5-205ENST00000409952 PECAM1P16284 738 aaPredicted RBP5.47□□□□□ -1.53
LSM5-205ENST00000409952 PORP16435 677 aaPredicted RBP5.47□□□□□ -1.53
LSM5-205ENST00000409952 TGM1P22735 817 aa5.47□□□□□ -1.53
LSM5-205ENST00000409952 ABCD3P28288 659 aa5.47□□□□□ -1.53
LSM5-205ENST00000409952 ZEB1P37275 1124 aaPredicted RBP5.47□□□□□ -1.53
LSM5-205ENST00000409952 PHKA1P46020 1223 aa5.47□□□□□ -1.53
LSM5-205ENST00000409952 KCNC1P48547 511 aa5.47□□□□□ -1.53
LSM5-205ENST00000409952 CCT4P50991 539 aaKnown RBP5.47□□□□□ -1.53
LSM5-205ENST00000409952 CALD1Q05682 793 aaKnown RBP5.47□□□□□ -1.53
LSM5-205ENST00000409952 ACVR2BQ13705 512 aa5.47□□□□□ -1.53
LSM5-205ENST00000409952 RTP5Q14D33 572 aa5.47□□□□□ -1.53
LSM5-205ENST00000409952 WTAPQ15007 396 aa5.47□□□□□ -1.53
LSM5-205ENST00000409952 SKIDA1Q1XH10 827 aa5.47□□□□□ -1.53
LSM5-205ENST00000409952 PABPC1LQ4VXU2 614 aaKnown RBP5.47□□□□□ -1.53
LSM5-205ENST00000409952 SLC10A5Q5PT55 438 aa5.47□□□□□ -1.53
LSM5-205ENST00000409952 MRNIPQ6NTE8 343 aa5.47□□□□□ -1.53
LSM5-205ENST00000409952 RRAGAQ7L523 313 aa5.47□□□□□ -1.53
LSM5-205ENST00000409952 FRMD5Q7Z6J6 570 aa5.47□□□□□ -1.53
LSM5-205ENST00000409952 VSIG1Q86XK7 387 aa5.47□□□□□ -1.53
LSM5-205ENST00000409952 PLXDC1Q8IUK5 500 aa5.47□□□□□ -1.53
LSM5-205ENST00000409952 TEX11Q8IYF3 940 aa5.47□□□□□ -1.53
LSM5-205ENST00000409952 ZNF713Q8N859 430 aaPredicted RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms