RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 CLDN23Q96B33 292 aa18.89■□□□□ 0.61
LSM5-204ENST00000409909 CCDC34Q96HJ3 373 aa18.89■□□□□ 0.61
LSM5-204ENST00000409909 ZFYVE19Q96K21 471 aa18.89■□□□□ 0.61
LSM5-204ENST00000409909 SPATA17Q96L03 361 aa18.89■□□□□ 0.61
LSM5-204ENST00000409909 NELL2Q99435 816 aa18.89■□□□□ 0.61
LSM5-204ENST00000409909 TMEM30AQ9NV96 361 aa18.89■□□□□ 0.61
LSM5-204ENST00000409909 UXTQ9UBK9 157 aaPredicted RBP18.89■□□□□ 0.61
LSM5-204ENST00000409909 CCL26Q9Y258 94 aa18.89■□□□□ 0.61
LSM5-204ENST00000409909 PIAS3Q9Y6X2 628 aa18.89■□□□□ 0.61
LSM5-204ENST00000409909 CFAP54Q96N23 3096 aa18.89■□□□□ 0.61
LSM5-204ENST00000409909 TRIM49P0CI25 452 aa18.88■□□□□ 0.61
LSM5-204ENST00000409909 TRIM49CP0CI26 452 aa18.88■□□□□ 0.61
LSM5-204ENST00000409909 DDX6P26196 483 aaKnown RBP eCLIP18.88■□□□□ 0.61
LSM5-204ENST00000409909 RPL13P26373 211 aaKnown RBP18.88■□□□□ 0.61
LSM5-204ENST00000409909 GRIK1P39086 918 aa18.88■□□□□ 0.61
LSM5-204ENST00000409909 NBL1P41271 181 aa18.88■□□□□ 0.61
LSM5-204ENST00000409909 PRCPP42785 496 aa18.88■□□□□ 0.61
LSM5-204ENST00000409909 MCCD1P59942 119 aaPredicted RBP18.88■□□□□ 0.61
LSM5-204ENST00000409909 USP46P62068 366 aa18.88■□□□□ 0.61
LSM5-204ENST00000409909 PPP3CAQ08209 521 aa18.88■□□□□ 0.61
LSM5-204ENST00000409909 SCARA5Q6ZMJ2 495 aa18.88■□□□□ 0.61
LSM5-204ENST00000409909 C1orf210Q8IVY1 113 aa18.88■□□□□ 0.61
LSM5-204ENST00000409909 FAM186BQ8IYM0 893 aa18.88■□□□□ 0.61
LSM5-204ENST00000409909 B3GALNT2Q8NCR0 500 aa18.88■□□□□ 0.61
LSM5-204ENST00000409909 MRPS31Q92665 395 aaKnown RBP18.88■□□□□ 0.61
LSM5-204ENST00000409909 USP13Q92995 863 aaPredicted RBP18.88■□□□□ 0.61
LSM5-204ENST00000409909 EEF2KMTQ96G04 330 aa18.88■□□□□ 0.61
LSM5-204ENST00000409909 TIGD1Q96MW7 591 aa18.88■□□□□ 0.61
LSM5-204ENST00000409909 GSDMAQ96QA5 445 aa18.88■□□□□ 0.61
LSM5-204ENST00000409909 B3GNT5Q9BYG0 378 aa18.88■□□□□ 0.61
LSM5-204ENST00000409909 ZMYM5Q9UJ78 669 aa18.88■□□□□ 0.61
LSM5-204ENST00000409909 PCDHA5Q9Y5H7 936 aa18.88■□□□□ 0.61
LSM5-204ENST00000409909 SOBPA7XYQ1 873 aa18.87■□□□□ 0.61
LSM5-204ENST00000409909 PROB1E7EW31 1015 aa18.87■□□□□ 0.61
LSM5-204ENST00000409909 CLDN5O00501 218 aa18.87■□□□□ 0.61
LSM5-204ENST00000409909 ASS1P00966 412 aaKnown RBP18.87■□□□□ 0.61
LSM5-204ENST00000409909 HLA-DRAP01903 254 aa18.87■□□□□ 0.61
LSM5-204ENST00000409909 PSMC2P35998 433 aaKnown RBP18.87■□□□□ 0.61
LSM5-204ENST00000409909 GCLMP48507 274 aa18.87■□□□□ 0.61
LSM5-204ENST00000409909 ZNF638Q14966 1978 aaKnown RBP18.87■□□□□ 0.61
LSM5-204ENST00000409909 EDRF1Q3B7T1 1238 aa18.87■□□□□ 0.61
LSM5-204ENST00000409909 ZNF658Q5TYW1 1059 aaPredicted RBP18.87■□□□□ 0.61
LSM5-204ENST00000409909 SPOPLQ6IQ16 392 aa18.87■□□□□ 0.61
LSM5-204ENST00000409909 INTS8Q75QN2 995 aaKnown RBP18.87■□□□□ 0.61
LSM5-204ENST00000409909 FRMD5Q7Z6J6 570 aa18.87■□□□□ 0.61
LSM5-204ENST00000409909 MAML2Q8IZL2 1156 aaPredicted RBP18.87■□□□□ 0.61
LSM5-204ENST00000409909 CELF5Q8N6W0 485 aaKnown RBP18.87■□□□□ 0.61
LSM5-204ENST00000409909 BPIFB1Q8TDL5 484 aa18.87■□□□□ 0.61
LSM5-204ENST00000409909 SLC22A12Q96S37 553 aa18.87■□□□□ 0.61
LSM5-204ENST00000409909 CYP2S1Q96SQ9 504 aa18.87■□□□□ 0.61
LSM5-204ENST00000409909 BCO2Q9BYV7 579 aa18.87■□□□□ 0.61
LSM5-204ENST00000409909 ZNF518BQ9C0D4 1074 aa18.87■□□□□ 0.61
LSM5-204ENST00000409909 RMND1Q9NWS8 449 aa18.87■□□□□ 0.61
LSM5-204ENST00000409909 ANAPC1Q9H1A4 1944 aa18.86■□□□□ 0.61
LSM5-204ENST00000409909 F8VP50 259 aa18.86■□□□□ 0.61
LSM5-204ENST00000409909 MAN2B1O00754 1011 aa18.86■□□□□ 0.61
LSM5-204ENST00000409909 CLSTN1O94985 981 aa18.86■□□□□ 0.61
LSM5-204ENST00000409909 AVPR1AP37288 418 aa18.86■□□□□ 0.61
LSM5-204ENST00000409909 SOX9P48436 509 aa18.86■□□□□ 0.61
LSM5-204ENST00000409909 MLLT6P55198 1093 aaPredicted RBP18.86■□□□□ 0.61
LSM5-204ENST00000409909 TNK2Q07912 1038 aa18.86■□□□□ 0.61
LSM5-204ENST00000409909 ARHGAP29Q52LW3 1261 aa18.86■□□□□ 0.61
LSM5-204ENST00000409909 TTC8Q8TAM2 541 aa18.86■□□□□ 0.61
LSM5-204ENST00000409909 RIN3Q8TB24 985 aa18.86■□□□□ 0.61
LSM5-204ENST00000409909 CSGALNACT1Q8TDX6 532 aa18.86■□□□□ 0.61
LSM5-204ENST00000409909 FAM3CQ92520 227 aa18.86■□□□□ 0.61
LSM5-204ENST00000409909 TAF4BQ92750 862 aa18.86■□□□□ 0.61
LSM5-204ENST00000409909 C8orf48Q96LL4 319 aa18.86■□□□□ 0.61
LSM5-204ENST00000409909 CEP295NLQ96MC4 621 aa18.86■□□□□ 0.61
LSM5-204ENST00000409909 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.86■□□□□ 0.61
LSM5-204ENST00000409909 TDP1Q9NUW8 608 aa18.86■□□□□ 0.61
LSM5-204ENST00000409909 GTSE1Q9NYZ3 720 aa18.86■□□□□ 0.61
LSM5-204ENST00000409909 NDRG2Q9UN36 371 aaKnown RBP18.86■□□□□ 0.61
LSM5-204ENST00000409909 MRPS17Q9Y2R5 130 aaKnown RBP18.86■□□□□ 0.61
LSM5-204ENST00000409909 RIF1Q5UIP0 2472 aaKnown RBP18.86■□□□□ 0.61
LSM5-204ENST00000409909 C2orf78A6NCI8 922 aa18.85■□□□□ 0.61
LSM5-204ENST00000409909 TRIM66O15016 1216 aa18.85■□□□□ 0.61
LSM5-204ENST00000409909 GADD45BO75293 160 aaPredicted RBP18.85■□□□□ 0.61
LSM5-204ENST00000409909 SMC2O95347 1197 aa18.85■□□□□ 0.61
LSM5-204ENST00000409909 KRT13P13646 458 aa18.85■□□□□ 0.61
LSM5-204ENST00000409909 CCNE1P24864 410 aa18.85■□□□□ 0.61
LSM5-204ENST00000409909 PIK3CAP42336 1068 aa18.85■□□□□ 0.61
LSM5-204ENST00000409909 ASPAP45381 313 aa18.85■□□□□ 0.61
LSM5-204ENST00000409909 RPS9P46781 194 aaKnown RBP18.85■□□□□ 0.61
LSM5-204ENST00000409909 ENPEPQ07075 957 aa18.85■□□□□ 0.61
LSM5-204ENST00000409909 COBLL1Q53SF7 1204 aa18.85■□□□□ 0.61
LSM5-204ENST00000409909 DENND5BQ6ZUT9 1274 aa18.85■□□□□ 0.61
LSM5-204ENST00000409909 PAQR9Q6ZVX9 377 aa18.85■□□□□ 0.61
LSM5-204ENST00000409909 TAS1R2Q8TE23 839 aa18.85■□□□□ 0.61
LSM5-204ENST00000409909 SMARCE1Q969G3 411 aa18.85■□□□□ 0.61
LSM5-204ENST00000409909 TTLL2Q9BWV7 592 aa18.85■□□□□ 0.61
LSM5-204ENST00000409909 APOBEC3GQ9HC16 384 aaKnown RBP18.85■□□□□ 0.61
LSM5-204ENST00000409909 SPATA6Q9NWH7 488 aaPredicted RBP18.85■□□□□ 0.61
LSM5-204ENST00000409909 GCNT4Q9P109 453 aa18.85■□□□□ 0.61
LSM5-204ENST00000409909 HMGXB4Q9UGU5 601 aa18.85■□□□□ 0.61
LSM5-204ENST00000409909 KIF26AQ9ULI4 1882 aaPredicted RBP18.85■□□□□ 0.61
LSM5-204ENST00000409909 SP9P0CG40 484 aa18.84■□□□□ 0.61
LSM5-204ENST00000409909 ANXA13P27216 316 aa18.84■□□□□ 0.61
LSM5-204ENST00000409909 KPNA1P52294 538 aaPredicted RBP18.84■□□□□ 0.61
LSM5-204ENST00000409909 PMS1P54277 932 aaKnown RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms