RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 GAREM2Q75VX8 874 aa23.77■■□□□ 1.4
PTCD3-203ENST00000409783 PDZD4Q76G19 769 aaPredicted RBP23.77■■□□□ 1.4
PTCD3-203ENST00000409783 RRAGAQ7L523 313 aa23.77■■□□□ 1.4
PTCD3-203ENST00000409783 NPAS3Q8IXF0 933 aa23.77■■□□□ 1.4
PTCD3-203ENST00000409783 FAM200AQ8TCP9 573 aa23.77■■□□□ 1.4
PTCD3-203ENST00000409783 FGF13Q92913 245 aa23.77■■□□□ 1.4
PTCD3-203ENST00000409783 ACSF2Q96CM8 615 aaPredicted RBP23.77■■□□□ 1.4
PTCD3-203ENST00000409783 SPATA17Q96L03 361 aa23.77■■□□□ 1.4
PTCD3-203ENST00000409783 C8orf48Q96LL4 319 aa23.77■■□□□ 1.4
PTCD3-203ENST00000409783 SIX2Q9NPC8 291 aa23.77■■□□□ 1.4
PTCD3-203ENST00000409783 FAM49BQ9NUQ9 324 aa23.77■■□□□ 1.4
PTCD3-203ENST00000409783 MRPS23Q9Y3D9 190 aaKnown RBP23.77■■□□□ 1.4
PTCD3-203ENST00000409783 MYH10P35580 1976 aa23.77■■□□□ 1.4
PTCD3-203ENST00000409783 ZNF638Q14966 1978 aaKnown RBP23.77■■□□□ 1.4
PTCD3-203ENST00000409783 F8VP50 259 aa23.76■■□□□ 1.39
PTCD3-203ENST00000409783 NOL4O94818 638 aa23.76■■□□□ 1.39
PTCD3-203ENST00000409783 MYL4P12829 197 aa23.76■■□□□ 1.39
PTCD3-203ENST00000409783 LAMP2P13473 410 aa23.76■■□□□ 1.39
PTCD3-203ENST00000409783 GBP2P32456 591 aaPredicted RBP23.76■■□□□ 1.39
PTCD3-203ENST00000409783 ZNF165P49910 485 aa23.76■■□□□ 1.39
PTCD3-203ENST00000409783 KCNMA1Q12791 1236 aa23.76■■□□□ 1.39
PTCD3-203ENST00000409783 IQCB1Q15051 598 aa23.76■■□□□ 1.39
PTCD3-203ENST00000409783 CYP4A22Q5TCH4 519 aa23.76■■□□□ 1.39
PTCD3-203ENST00000409783 APTXQ7Z2E3 356 aaKnown RBP23.76■■□□□ 1.39
PTCD3-203ENST00000409783 RNF135Q8IUD6 432 aa23.76■■□□□ 1.39
PTCD3-203ENST00000409783 PLCD3Q8N3E9 789 aa23.76■■□□□ 1.39
PTCD3-203ENST00000409783 SHKBP1Q8TBC3 707 aa23.76■■□□□ 1.39
PTCD3-203ENST00000409783 SLC2A14Q8TDB8 520 aa23.76■■□□□ 1.39
PTCD3-203ENST00000409783 ING5Q8WYH8 240 aa23.76■■□□□ 1.39
PTCD3-203ENST00000409783 TMEM176AQ96HP8 235 aa23.76■■□□□ 1.39
PTCD3-203ENST00000409783 HNRNPABQ99729 332 aaKnown RBP23.76■■□□□ 1.39
PTCD3-203ENST00000409783 LIMA1Q9UHB6 759 aaKnown RBP23.76■■□□□ 1.39
PTCD3-203ENST00000409783 CDH7Q9ULB5 785 aa23.76■■□□□ 1.39
PTCD3-203ENST00000409783 PATJQ8NI35 1801 aa23.75■■□□□ 1.39
PTCD3-203ENST00000409783 SLC38A8A6NNN8 435 aa23.75■■□□□ 1.39
PTCD3-203ENST00000409783 ZNF197O14709 1029 aa23.75■■□□□ 1.39
PTCD3-203ENST00000409783 CSH1P0DML2 217 aa23.75■■□□□ 1.39
PTCD3-203ENST00000409783 CSH2P0DML3 217 aa23.75■■□□□ 1.39
PTCD3-203ENST00000409783 GRIK1P39086 918 aa23.75■■□□□ 1.39
PTCD3-203ENST00000409783 YWHAEP62258 255 aaKnown RBP23.75■■□□□ 1.39
PTCD3-203ENST00000409783 GJB7Q6PEY0 223 aa23.75■■□□□ 1.39
PTCD3-203ENST00000409783 TMEM150AQ86TG1 271 aa23.75■■□□□ 1.39
PTCD3-203ENST00000409783 ZMIZ2Q8NF64 920 aa23.75■■□□□ 1.39
PTCD3-203ENST00000409783 KHSRPQ92945 711 aaKnown RBP eCLIP23.75■■□□□ 1.39
PTCD3-203ENST00000409783 CYFIP2Q96F07 1278 aa23.75■■□□□ 1.39
PTCD3-203ENST00000409783 MYRFLQ96LU7 910 aa23.75■■□□□ 1.39
PTCD3-203ENST00000409783 CEP295NLQ96MC4 621 aa23.75■■□□□ 1.39
PTCD3-203ENST00000409783 MUC3AQ02505 3323 aa23.75■■□□□ 1.39
PTCD3-203ENST00000409783 LRRC10BA6NIK2 292 aa23.74■■□□□ 1.39
PTCD3-203ENST00000409783 RNF225M0QZC1 329 aaPredicted RBP23.74■■□□□ 1.39
PTCD3-203ENST00000409783 TRIM66O15016 1216 aa23.74■■□□□ 1.39
PTCD3-203ENST00000409783 GJA1P17302 382 aa23.74■■□□□ 1.39
PTCD3-203ENST00000409783 PPP1R26Q5T8A7 1209 aaPredicted RBP23.74■■□□□ 1.39
PTCD3-203ENST00000409783 TRMT2BQ96GJ1 504 aaKnown RBP23.74■■□□□ 1.39
PTCD3-203ENST00000409783 SMARCD1Q96GM5 515 aa23.74■■□□□ 1.39
PTCD3-203ENST00000409783 KCNK16Q96T55 309 aa23.74■■□□□ 1.39
PTCD3-203ENST00000409783 SMOQ99835 787 aa23.74■■□□□ 1.39
PTCD3-203ENST00000409783 MED10Q9BTT4 135 aa23.74■■□□□ 1.39
PTCD3-203ENST00000409783 VPS16Q9H269 839 aa23.74■■□□□ 1.39
PTCD3-203ENST00000409783 CSNK1G1Q9HCP0 422 aa23.74■■□□□ 1.39
PTCD3-203ENST00000409783 UBE2TQ9NPD8 197 aaPredicted RBP23.74■■□□□ 1.39
PTCD3-203ENST00000409783 KRT82Q9NSB4 513 aa23.74■■□□□ 1.39
PTCD3-203ENST00000409783 LIMD1Q9UGP4 676 aa23.74■■□□□ 1.39
PTCD3-203ENST00000409783 CNTN6Q9UQ52 1028 aa23.74■■□□□ 1.39
PTCD3-203ENST00000409783 ZFP37Q9Y6Q3 630 aaPredicted RBP23.74■■□□□ 1.39
PTCD3-203ENST00000409783 ATP8B3O60423 1300 aa23.74■■□□□ 1.39
PTCD3-203ENST00000409783 ANAPC1Q9H1A4 1944 aa23.73■■□□□ 1.39
PTCD3-203ENST00000409783 BEST1O76090 585 aa23.73■■□□□ 1.39
PTCD3-203ENST00000409783 F11P03951 625 aa23.73■■□□□ 1.39
PTCD3-203ENST00000409783 ATP1A3P13637 1013 aa23.73■■□□□ 1.39
PTCD3-203ENST00000409783 GABRR2P28476 465 aa23.73■■□□□ 1.39
PTCD3-203ENST00000409783 ZNF132P52740 706 aa23.73■■□□□ 1.39
PTCD3-203ENST00000409783 COPB1P53618 953 aaKnown RBP23.73■■□□□ 1.39
PTCD3-203ENST00000409783 USP46P62068 366 aa23.73■■□□□ 1.39
PTCD3-203ENST00000409783 TEAD2Q15562 447 aa23.73■■□□□ 1.39
PTCD3-203ENST00000409783 ARHGAP17Q68EM7 881 aa23.73■■□□□ 1.39
PTCD3-203ENST00000409783 JAKMIP2Q96AA8 810 aa23.73■■□□□ 1.39
PTCD3-203ENST00000409783 HEXIM2Q96MH2 286 aaKnown RBP23.73■■□□□ 1.39
PTCD3-203ENST00000409783 APEX2Q9UBZ4 518 aa23.73■■□□□ 1.39
PTCD3-203ENST00000409783 AJAP1Q9UKB5 411 aaPredicted RBP23.73■■□□□ 1.39
PTCD3-203ENST00000409783 A0A1W2PRU2 124 aa23.72■■□□□ 1.39
PTCD3-203ENST00000409783 SMTNL1A8MU46 457 aa23.72■■□□□ 1.39
PTCD3-203ENST00000409783 AP1G2O75843 785 aa23.72■■□□□ 1.39
PTCD3-203ENST00000409783 ADORA2BP29275 332 aa23.72■■□□□ 1.39
PTCD3-203ENST00000409783 TMEM270Q6UE05 265 aa23.72■■□□□ 1.39
PTCD3-203ENST00000409783 MCRS1Q96EZ8 462 aa23.72■■□□□ 1.39
PTCD3-203ENST00000409783 TTLL2Q9BWV7 592 aa23.72■■□□□ 1.39
PTCD3-203ENST00000409783 CBX8Q9HC52 389 aa23.72■■□□□ 1.39
PTCD3-203ENST00000409783 DMAP1Q9NPF5 467 aaPredicted RBP23.72■■□□□ 1.39
PTCD3-203ENST00000409783 GDE1Q9NZC3 331 aa23.72■■□□□ 1.39
PTCD3-203ENST00000409783 PCDHB4Q9Y5E5 795 aa23.72■■□□□ 1.39
PTCD3-203ENST00000409783 CUL9Q8IWT3 2517 aa23.71■■□□□ 1.39
PTCD3-203ENST00000409783 ANHXE9PGG2 379 aa23.71■■□□□ 1.39
PTCD3-203ENST00000409783 TNFRSF10AO00220 468 aa23.71■■□□□ 1.39
PTCD3-203ENST00000409783 TNFRSF10BO14763 440 aa23.71■■□□□ 1.39
PTCD3-203ENST00000409783 TADA3O75528 432 aa23.71■■□□□ 1.39
PTCD3-203ENST00000409783 FGF19O95750 216 aa23.71■■□□□ 1.39
PTCD3-203ENST00000409783 TRIM21P19474 475 aaKnown RBP23.71■■□□□ 1.39
PTCD3-203ENST00000409783 ANXA13P27216 316 aa23.71■■□□□ 1.39
PTCD3-203ENST00000409783 TAF12Q16514 161 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms