RNA–Protein interactions for RNA: ENST00000409024.3

POLR1A-202, Transcript of RNA polymerase I subunit A, humanhuman

TSL 3

Gene POLR1A, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-202ENST00000409024 SUSD3Q96L08 255 aa10.34□□□□□ -0.75
POLR1A-202ENST00000409024 ACBD6Q9BR61 282 aa10.34□□□□□ -0.75
POLR1A-202ENST00000409024 OXCT2Q9BYC2 517 aaPredicted RBP10.34□□□□□ -0.75
POLR1A-202ENST00000409024 MRPL9Q9BYD2 267 aaKnown RBP10.34□□□□□ -0.75
POLR1A-202ENST00000409024 SYNCQ9H7C4 482 aa10.34□□□□□ -0.75
POLR1A-202ENST00000409024 GOLGA2P5Q9HBQ8 144 aa10.34□□□□□ -0.75
POLR1A-202ENST00000409024 THEGQ9P2T0 379 aa10.34□□□□□ -0.75
POLR1A-202ENST00000409024 HMGXB4Q9UGU5 601 aa10.34□□□□□ -0.75
POLR1A-202ENST00000409024 MYH10P35580 1976 aa10.34□□□□□ -0.75
POLR1A-202ENST00000409024 ZNF185O15231 689 aa10.33□□□□□ -0.76
POLR1A-202ENST00000409024 PQBP1O60828 265 aaKnown RBP10.33□□□□□ -0.76
POLR1A-202ENST00000409024 B3GAT3O94766 335 aa10.33□□□□□ -0.76
POLR1A-202ENST00000409024 ERBB2P04626 1255 aa10.33□□□□□ -0.76
POLR1A-202ENST00000409024 FGFR1P11362 822 aa10.33□□□□□ -0.76
POLR1A-202ENST00000409024 KRT3P12035 628 aa10.33□□□□□ -0.76
POLR1A-202ENST00000409024 PTPN1P18031 435 aaKnown RBP10.33□□□□□ -0.76
POLR1A-202ENST00000409024 CETN2P41208 172 aa10.33□□□□□ -0.76
POLR1A-202ENST00000409024 ATN1P54259 1190 aaPredicted RBP10.33□□□□□ -0.76
POLR1A-202ENST00000409024 PSMC1P62191 440 aaKnown RBP10.33□□□□□ -0.76
POLR1A-202ENST00000409024 TLE2Q04725 743 aa10.33□□□□□ -0.76
POLR1A-202ENST00000409024 ERCC6LQ2NKX8 1250 aa10.33□□□□□ -0.76
POLR1A-202ENST00000409024 GOLGA7BQ2TAP0 167 aa10.33□□□□□ -0.76
POLR1A-202ENST00000409024 SEL1L2Q5TEA6 688 aa10.33□□□□□ -0.76
POLR1A-202ENST00000409024 WSCD1Q658N2 575 aa10.33□□□□□ -0.76
POLR1A-202ENST00000409024 XYLT1Q86Y38 959 aa10.33□□□□□ -0.76
POLR1A-202ENST00000409024 NPAS4Q8IUM7 802 aa10.33□□□□□ -0.76
POLR1A-202ENST00000409024 RHOT1Q8IXI2 618 aa10.33□□□□□ -0.76
POLR1A-202ENST00000409024 COLGALT2Q8IYK4 626 aa10.33□□□□□ -0.76
POLR1A-202ENST00000409024 ABI1Q8IZP0 508 aa10.33□□□□□ -0.76
POLR1A-202ENST00000409024 THEM5Q8N1Q8 247 aa10.33□□□□□ -0.76
POLR1A-202ENST00000409024 RNF169Q8NCN4 708 aa10.33□□□□□ -0.76
POLR1A-202ENST00000409024 LINC01599Q8WXQ3 324 aa10.33□□□□□ -0.76
POLR1A-202ENST00000409024 PPM1EQ8WY54 764 aa10.33□□□□□ -0.76
POLR1A-202ENST00000409024 KCTD13Q8WZ19 329 aa10.33□□□□□ -0.76
POLR1A-202ENST00000409024 CAPZA3Q96KX2 299 aa10.33□□□□□ -0.76
POLR1A-202ENST00000409024 RUNDC3BQ96NL0 473 aa10.33□□□□□ -0.76
POLR1A-202ENST00000409024 FAM193BQ96PV7 902 aaPredicted RBP10.33□□□□□ -0.76
POLR1A-202ENST00000409024 TMEM175Q9BSA9 504 aa10.33□□□□□ -0.76
POLR1A-202ENST00000409024 TMEM51Q9NW97 253 aa10.33□□□□□ -0.76
POLR1A-202ENST00000409024 ARGLU1Q9NWB6 273 aaPredicted RBP10.33□□□□□ -0.76
POLR1A-202ENST00000409024 TMEM59LQ9UK28 342 aa10.33□□□□□ -0.76
POLR1A-202ENST00000409024 TBX21Q9UL17 535 aa10.33□□□□□ -0.76
POLR1A-202ENST00000409024 PCDHB8Q9UN66 801 aa10.33□□□□□ -0.76
POLR1A-202ENST00000409024 SCN1AP35498 2009 aa10.33□□□□□ -0.76
POLR1A-202ENST00000409024 GOLGA6L10A0A0M3HER8 536 aa10.32□□□□□ -0.76
POLR1A-202ENST00000409024 XPO1O14980 1071 aaKnown RBP10.32□□□□□ -0.76
POLR1A-202ENST00000409024 SYN3O14994 580 aa10.32□□□□□ -0.76
POLR1A-202ENST00000409024 ATMINO43313 823 aaPredicted RBP10.32□□□□□ -0.76
POLR1A-202ENST00000409024 CEP104O60308 925 aa10.32□□□□□ -0.76
POLR1A-202ENST00000409024 POMCP01189 267 aa10.32□□□□□ -0.76
POLR1A-202ENST00000409024 PFKMP08237 780 aa10.32□□□□□ -0.76
POLR1A-202ENST00000409024 CXCR5P32302 372 aa10.32□□□□□ -0.76
POLR1A-202ENST00000409024 PLA2G4AP47712 749 aa10.32□□□□□ -0.76
POLR1A-202ENST00000409024 COPS2P61201 443 aa10.32□□□□□ -0.76
POLR1A-202ENST00000409024 ELAVL2Q12926 359 aaKnown RBP10.32□□□□□ -0.76
POLR1A-202ENST00000409024 BRD3Q15059 726 aa10.32□□□□□ -0.76
POLR1A-202ENST00000409024 TIGD5Q53EQ6 642 aa10.32□□□□□ -0.76
POLR1A-202ENST00000409024 CLLU1OSQ5K130 101 aa10.32□□□□□ -0.76
POLR1A-202ENST00000409024 TEX35Q5T0J7 233 aa10.32□□□□□ -0.76
POLR1A-202ENST00000409024 WDR93Q6P2C0 686 aa10.32□□□□□ -0.76
POLR1A-202ENST00000409024 CNKSR3Q6P9H4 555 aa10.32□□□□□ -0.76
POLR1A-202ENST00000409024 POLNQ7Z5Q5 900 aa10.32□□□□□ -0.76
POLR1A-202ENST00000409024 MTERF4Q7Z6M4 381 aaKnown RBP10.32□□□□□ -0.76
POLR1A-202ENST00000409024 TTC30AQ86WT1 665 aa10.32□□□□□ -0.76
POLR1A-202ENST00000409024 KATNAL2Q8IYT4 538 aa10.32□□□□□ -0.76
POLR1A-202ENST00000409024 CRIPAKQ8N1N5 446 aa10.32□□□□□ -0.76
POLR1A-202ENST00000409024 BADQ92934 168 aa10.32□□□□□ -0.76
POLR1A-202ENST00000409024 CPXM1Q96SM3 734 aa10.32□□□□□ -0.76
POLR1A-202ENST00000409024 GAS2L1Q99501 681 aaPredicted RBP10.32□□□□□ -0.76
POLR1A-202ENST00000409024 COLEC11Q9BWP8 271 aa10.32□□□□□ -0.76
POLR1A-202ENST00000409024 DUSP16Q9BY84 665 aa10.32□□□□□ -0.76
POLR1A-202ENST00000409024 RNF19AQ9NV58 838 aa10.32□□□□□ -0.76
POLR1A-202ENST00000409024 ASNSD1Q9NWL6 643 aa10.32□□□□□ -0.76
POLR1A-202ENST00000409024 DDX43Q9NXZ2 648 aaKnown RBP10.32□□□□□ -0.76
POLR1A-202ENST00000409024 DDX56Q9NY93 547 aaKnown RBP10.32□□□□□ -0.76
POLR1A-202ENST00000409024 CYTH4Q9UIA0 394 aa10.32□□□□□ -0.76
POLR1A-202ENST00000409024 RAB21Q9UL25 225 aa10.32□□□□□ -0.76
POLR1A-202ENST00000409024 LRFN2Q9ULH4 789 aa10.32□□□□□ -0.76
POLR1A-202ENST00000409024 PACSIN2Q9UNF0 486 aaPredicted RBP10.32□□□□□ -0.76
POLR1A-202ENST00000409024 ATP11BQ9Y2G3 1177 aa10.32□□□□□ -0.76
POLR1A-202ENST00000409024 NME7Q9Y5B8 376 aa10.32□□□□□ -0.76
POLR1A-202ENST00000409024 ABHD14A-ACY1A0A1B0GW23 586 aa10.31□□□□□ -0.76
POLR1A-202ENST00000409024 CASTOR2A6NHX0 329 aa10.31□□□□□ -0.76
POLR1A-202ENST00000409024 PDE2AO00408 941 aaPredicted RBP10.31□□□□□ -0.76
POLR1A-202ENST00000409024 DPYSL4O14531 572 aa10.31□□□□□ -0.76
POLR1A-202ENST00000409024 SART1O43290 800 aaKnown RBP10.31□□□□□ -0.76
POLR1A-202ENST00000409024 FBXO21O94952 628 aa10.31□□□□□ -0.76
POLR1A-202ENST00000409024 GLI1P08151 1106 aa10.31□□□□□ -0.76
POLR1A-202ENST00000409024 KRT7P08729 469 aa10.31□□□□□ -0.76
POLR1A-202ENST00000409024 CLTBP09497 229 aa10.31□□□□□ -0.76
POLR1A-202ENST00000409024 PDGFRBP09619 1106 aa10.31□□□□□ -0.76
POLR1A-202ENST00000409024 LMO2P25791 158 aa10.31□□□□□ -0.76
POLR1A-202ENST00000409024 PCK1P35558 622 aa10.31□□□□□ -0.76
POLR1A-202ENST00000409024 AFF1P51825 1210 aaKnown RBP10.31□□□□□ -0.76
POLR1A-202ENST00000409024 SLC6A3Q01959 620 aa10.31□□□□□ -0.76
POLR1A-202ENST00000409024 RNASELQ05823 741 aaKnown RBP10.31□□□□□ -0.76
POLR1A-202ENST00000409024 PDE4CQ08493 712 aa10.31□□□□□ -0.76
POLR1A-202ENST00000409024 IKBKEQ14164 716 aa10.31□□□□□ -0.76
POLR1A-202ENST00000409024 ELF2Q15723 593 aa10.31□□□□□ -0.76
POLR1A-202ENST00000409024 HADHQ16836 314 aaKnown RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms