RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 PDZD8Q8NEN9 1154 aa9.69□□□□□ -0.86
SNORD88A-201ENST00000408314 CCDC26Q8TAB7 109 aa9.69□□□□□ -0.86
SNORD88A-201ENST00000408314 ATRIPQ8WXE1 791 aa9.69□□□□□ -0.86
SNORD88A-201ENST00000408314 SECISBP2LQ93073 1101 aaKnown RBP9.69□□□□□ -0.86
SNORD88A-201ENST00000408314 C8orf48Q96LL4 319 aa9.69□□□□□ -0.86
SNORD88A-201ENST00000408314 SLITRK1Q96PX8 696 aa9.69□□□□□ -0.86
SNORD88A-201ENST00000408314 MKNK1Q9BUB5 465 aa9.69□□□□□ -0.86
SNORD88A-201ENST00000408314 SLC46A2Q9BY10 475 aa9.69□□□□□ -0.86
SNORD88A-201ENST00000408314 ZFHX2Q9C0A1 2572 aaPredicted RBP9.69□□□□□ -0.86
SNORD88A-201ENST00000408314 KCTD10Q9H3F6 313 aa9.69□□□□□ -0.86
SNORD88A-201ENST00000408314 DMAC2Q9NW81 257 aa9.69□□□□□ -0.86
SNORD88A-201ENST00000408314 TRPM5Q9NZQ8 1165 aa9.69□□□□□ -0.86
SNORD88A-201ENST00000408314 NXF1Q9UBU9 619 aaKnown RBP9.69□□□□□ -0.86
SNORD88A-201ENST00000408314 NDRG2Q9UN36 371 aaKnown RBP9.69□□□□□ -0.86
SNORD88A-201ENST00000408314 ZDHHC9Q9Y397 364 aa9.69□□□□□ -0.86
SNORD88A-201ENST00000408314 TICRRQ7Z2Z1 1910 aa9.68□□□□□ -0.86
SNORD88A-201ENST00000408314 MYBPHLA2RUH7 354 aa9.68□□□□□ -0.86
SNORD88A-201ENST00000408314 LRRIQ3A6PVS8 624 aaPredicted RBP9.68□□□□□ -0.86
SNORD88A-201ENST00000408314 SPECC1L-ADORA2AF8WAN1 911 aa9.68□□□□□ -0.86
SNORD88A-201ENST00000408314 ZNF202O95125 648 aa9.68□□□□□ -0.86
SNORD88A-201ENST00000408314 RTN3O95197 1032 aaPredicted RBP9.68□□□□□ -0.86
SNORD88A-201ENST00000408314 PRAMEF12O95522 483 aa9.68□□□□□ -0.86
SNORD88A-201ENST00000408314 PDGFRBP09619 1106 aa9.68□□□□□ -0.86
SNORD88A-201ENST00000408314 PTPN1P18031 435 aaKnown RBP9.68□□□□□ -0.86
SNORD88A-201ENST00000408314 CD72P21854 359 aa9.68□□□□□ -0.86
SNORD88A-201ENST00000408314 BDNFP23560 247 aa9.68□□□□□ -0.86
SNORD88A-201ENST00000408314 NR2F2P24468 414 aa9.68□□□□□ -0.86
SNORD88A-201ENST00000408314 CCNE1P24864 410 aa9.68□□□□□ -0.86
SNORD88A-201ENST00000408314 CTHP32929 405 aa9.68□□□□□ -0.86
SNORD88A-201ENST00000408314 PIK3CAP42336 1068 aa9.68□□□□□ -0.86
SNORD88A-201ENST00000408314 MYL6P60660 151 aa9.68□□□□□ -0.86
SNORD88A-201ENST00000408314 NOP14P78316 857 aaKnown RBP9.68□□□□□ -0.86
SNORD88A-201ENST00000408314 DPYDQ12882 1025 aa9.68□□□□□ -0.86
SNORD88A-201ENST00000408314 NR1H3Q13133 447 aa9.68□□□□□ -0.86
SNORD88A-201ENST00000408314 EDRF1Q3B7T1 1238 aa9.68□□□□□ -0.86
SNORD88A-201ENST00000408314 MDH1BQ5I0G3 518 aa9.68□□□□□ -0.86
SNORD88A-201ENST00000408314 POTEHQ6S545 545 aa9.68□□□□□ -0.86
SNORD88A-201ENST00000408314 UNC93AQ86WB7 457 aa9.68□□□□□ -0.86
SNORD88A-201ENST00000408314 CPA6Q8N4T0 437 aa9.68□□□□□ -0.86
SNORD88A-201ENST00000408314 TTC39CQ8N584 583 aa9.68□□□□□ -0.86
SNORD88A-201ENST00000408314 B3GALNT2Q8NCR0 500 aa9.68□□□□□ -0.86
SNORD88A-201ENST00000408314 PCED1BQ96HM7 432 aa9.68□□□□□ -0.86
SNORD88A-201ENST00000408314 TSG101Q99816 390 aa9.68□□□□□ -0.86
SNORD88A-201ENST00000408314 TRPC7Q9HCX4 862 aa9.68□□□□□ -0.86
SNORD88A-201ENST00000408314 CRTAC1Q9NQ79 661 aa9.68□□□□□ -0.86
SNORD88A-201ENST00000408314 PRMT8Q9NR22 394 aaPredicted RBP9.68□□□□□ -0.86
SNORD88A-201ENST00000408314 ZSCAN32Q9NX65 697 aa9.68□□□□□ -0.86
SNORD88A-201ENST00000408314 PATJQ8NI35 1801 aa9.68□□□□□ -0.86
SNORD88A-201ENST00000408314 COL4A2P08572 1712 aa9.68□□□□□ -0.86
SNORD88A-201ENST00000408314 FAM186AA6NE01 2351 aa9.67□□□□□ -0.86
SNORD88A-201ENST00000408314 ATG13O75143 517 aa9.67□□□□□ -0.86
SNORD88A-201ENST00000408314 LRRN2O75325 713 aa9.67□□□□□ -0.86
SNORD88A-201ENST00000408314 CST3P01034 146 aaPredicted RBP9.67□□□□□ -0.86
SNORD88A-201ENST00000408314 TCF3P15923 654 aa9.67□□□□□ -0.86
SNORD88A-201ENST00000408314 LMO2P25791 158 aa9.67□□□□□ -0.86
SNORD88A-201ENST00000408314 GTF2H1P32780 548 aa9.67□□□□□ -0.86
SNORD88A-201ENST00000408314 PSMC2P35998 433 aaKnown RBP9.67□□□□□ -0.86
SNORD88A-201ENST00000408314 PPP1R2P41236 205 aa9.67□□□□□ -0.86
SNORD88A-201ENST00000408314 IFNAR2P48551 515 aa9.67□□□□□ -0.86
SNORD88A-201ENST00000408314 GPR15P49685 360 aa9.67□□□□□ -0.86
SNORD88A-201ENST00000408314 VAMP7P51809 220 aa9.67□□□□□ -0.86
SNORD88A-201ENST00000408314 CSTF1Q05048 431 aaKnown RBP9.67□□□□□ -0.86
SNORD88A-201ENST00000408314 GRSF1Q12849 480 aaKnown RBP eCLIP9.67□□□□□ -0.86
SNORD88A-201ENST00000408314 STIM1Q13586 685 aa9.67□□□□□ -0.86
SNORD88A-201ENST00000408314 MTF1Q14872 753 aa9.67□□□□□ -0.86
SNORD88A-201ENST00000408314 ZACNQ401N2 412 aa9.67□□□□□ -0.86
SNORD88A-201ENST00000408314 TDRD10Q5VZ19 366 aaKnown RBP9.67□□□□□ -0.86
SNORD88A-201ENST00000408314 TXNDC8Q6A555 127 aa9.67□□□□□ -0.86
SNORD88A-201ENST00000408314 ASCL5Q7RTU5 278 aa9.67□□□□□ -0.86
SNORD88A-201ENST00000408314 TMEM150AQ86TG1 271 aa9.67□□□□□ -0.86
SNORD88A-201ENST00000408314 DDX42Q86XP3 938 aaKnown RBP eCLIP9.67□□□□□ -0.86
SNORD88A-201ENST00000408314 FAM186BQ8IYM0 893 aa9.67□□□□□ -0.86
SNORD88A-201ENST00000408314 SPEM1Q8N4L4 309 aa9.67□□□□□ -0.86
SNORD88A-201ENST00000408314 STKLD1Q8NE28 680 aa9.67□□□□□ -0.86
SNORD88A-201ENST00000408314 OVCA2Q8WZ82 227 aa9.67□□□□□ -0.86
SNORD88A-201ENST00000408314 ATP2A3Q93084 1043 aa9.67□□□□□ -0.86
SNORD88A-201ENST00000408314 RSPRY1Q96DX4 576 aa9.67□□□□□ -0.86
SNORD88A-201ENST00000408314 SMARCD1Q96GM5 515 aa9.67□□□□□ -0.86
SNORD88A-201ENST00000408314 FAXDC2Q96IV6 333 aa9.67□□□□□ -0.86
SNORD88A-201ENST00000408314 FAM84AQ96KN4 292 aa9.67□□□□□ -0.86
SNORD88A-201ENST00000408314 GSDMAQ96QA5 445 aa9.67□□□□□ -0.86
SNORD88A-201ENST00000408314 MRPL45Q9BRJ2 306 aaKnown RBP9.67□□□□□ -0.86
SNORD88A-201ENST00000408314 MED10Q9BTT4 135 aa9.67□□□□□ -0.86
SNORD88A-201ENST00000408314 TTLL2Q9BWV7 592 aa9.67□□□□□ -0.86
SNORD88A-201ENST00000408314 XYLT2Q9H1B5 865 aa9.67□□□□□ -0.86
SNORD88A-201ENST00000408314 FAM124BQ9H5Z6 455 aaPredicted RBP9.67□□□□□ -0.86
SNORD88A-201ENST00000408314 LMAN1LQ9HAT1 526 aa9.67□□□□□ -0.86
SNORD88A-201ENST00000408314 DMAP1Q9NPF5 467 aaPredicted RBP9.67□□□□□ -0.86
SNORD88A-201ENST00000408314 COMMD8Q9NX08 183 aa9.67□□□□□ -0.86
SNORD88A-201ENST00000408314 MTF2Q9Y483 593 aaPredicted RBP9.67□□□□□ -0.86
SNORD88A-201ENST00000408314 RIF1Q5UIP0 2472 aaKnown RBP9.67□□□□□ -0.86
SNORD88A-201ENST00000408314 F8VP50 259 aa9.66□□□□□ -0.86
SNORD88A-201ENST00000408314 NRG2O14511 850 aaPredicted RBP9.66□□□□□ -0.86
SNORD88A-201ENST00000408314 SLC9A3R1O14745 358 aaPredicted RBP9.66□□□□□ -0.86
SNORD88A-201ENST00000408314 CETN3O15182 167 aa9.66□□□□□ -0.86
SNORD88A-201ENST00000408314 ATP2C2O75185 946 aa9.66□□□□□ -0.86
SNORD88A-201ENST00000408314 PAPSS2O95340 614 aaPredicted RBP9.66□□□□□ -0.86
SNORD88A-201ENST00000408314 NFATC1O95644 943 aa9.66□□□□□ -0.86
SNORD88A-201ENST00000408314 ASS1P00966 412 aaKnown RBP9.66□□□□□ -0.86
SNORD88A-201ENST00000408314 C4BPAP04003 597 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms