RNA–Protein interactions for RNA: ENST00000406949.5

PCNX4-204, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-204ENST00000406949 MFSD5Q6N075 450 aa12.47□□□□□ -0.41
PCNX4-204ENST00000406949 LVRNQ6Q4G3 990 aa12.47□□□□□ -0.41
PCNX4-204ENST00000406949 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.47□□□□□ -0.41
PCNX4-204ENST00000406949 ERP27Q96DN0 273 aa12.47□□□□□ -0.41
PCNX4-204ENST00000406949 GPR20Q99678 358 aa12.47□□□□□ -0.41
PCNX4-204ENST00000406949 KDM4CQ9H3R0 1056 aa12.47□□□□□ -0.41
PCNX4-204ENST00000406949 MINDY3Q9H8M7 445 aa12.47□□□□□ -0.41
PCNX4-204ENST00000406949 SLCO1B3Q9NPD5 702 aa12.47□□□□□ -0.41
PCNX4-204ENST00000406949 PSMC3IPQ9P2W1 217 aaPredicted RBP12.47□□□□□ -0.41
PCNX4-204ENST00000406949 HMGXB4Q9UGU5 601 aa12.47□□□□□ -0.41
PCNX4-204ENST00000406949 USP18Q9UMW8 372 aa12.47□□□□□ -0.41
PCNX4-204ENST00000406949 EIF4E1BA6NMX2 242 aaKnown RBP12.47□□□□□ -0.41
PCNX4-204ENST00000406949 FZD9O00144 591 aa12.47□□□□□ -0.41
PCNX4-204ENST00000406949 MICAL2O94851 1124 aa12.47□□□□□ -0.41
PCNX4-204ENST00000406949 APRTP07741 180 aa12.47□□□□□ -0.41
PCNX4-204ENST00000406949 TROVE2P10155 538 aaKnown RBP eCLIP12.47□□□□□ -0.41
PCNX4-204ENST00000406949 ICAM3P32942 547 aa12.47□□□□□ -0.41
PCNX4-204ENST00000406949 BCAR1P56945 870 aa12.47□□□□□ -0.41
PCNX4-204ENST00000406949 MORF4L2Q15014 288 aa12.47□□□□□ -0.41
PCNX4-204ENST00000406949 EFTUD2Q15029 972 aaKnown RBP eCLIP12.47□□□□□ -0.41
PCNX4-204ENST00000406949 KIZQ2M2Z5 673 aa12.47□□□□□ -0.41
PCNX4-204ENST00000406949 KCNV1Q6PIU1 500 aa12.47□□□□□ -0.41
PCNX4-204ENST00000406949 VSTM1Q6UX27 236 aa12.47□□□□□ -0.41
PCNX4-204ENST00000406949 ACOT1Q86TX2 421 aa12.47□□□□□ -0.41
PCNX4-204ENST00000406949 ALLCQ8N6M5 410 aa12.47□□□□□ -0.41
PCNX4-204ENST00000406949 AFG1LQ8WV93 481 aa12.47□□□□□ -0.41
PCNX4-204ENST00000406949 ACAP3Q96P50 834 aa12.47□□□□□ -0.41
PCNX4-204ENST00000406949 RNPEPQ9H4A4 650 aa12.47□□□□□ -0.41
PCNX4-204ENST00000406949 NPHS2Q9NP85 383 aa12.47□□□□□ -0.41
PCNX4-204ENST00000406949 PRMT7Q9NVM4 692 aaPredicted RBP12.47□□□□□ -0.41
PCNX4-204ENST00000406949 ZNF112Q9UJU3 913 aa12.47□□□□□ -0.41
PCNX4-204ENST00000406949 PNMA3Q9UL41 463 aa12.47□□□□□ -0.41
PCNX4-204ENST00000406949 MAGED2Q9UNF1 606 aaPredicted RBP12.47□□□□□ -0.41
PCNX4-204ENST00000406949 EIF4BP23588 611 aaKnown RBP12.46□□□□□ -0.41
PCNX4-204ENST00000406949 SDC4P31431 198 aa12.46□□□□□ -0.41
PCNX4-204ENST00000406949 GAD2Q05329 585 aa12.46□□□□□ -0.41
PCNX4-204ENST00000406949 ITIH4Q14624 930 aa12.46□□□□□ -0.41
PCNX4-204ENST00000406949 CCT6BQ92526 530 aa12.46□□□□□ -0.41
PCNX4-204ENST00000406949 TMEM176AQ96HP8 235 aa12.46□□□□□ -0.41
PCNX4-204ENST00000406949 ZNF518BQ9C0D4 1074 aa12.46□□□□□ -0.41
PCNX4-204ENST00000406949 A6NJR5 290 aa12.46□□□□□ -0.41
PCNX4-204ENST00000406949 NDST1P52848 882 aa12.46□□□□□ -0.41
PCNX4-204ENST00000406949 C6orf89Q6UWU4 347 aa12.46□□□□□ -0.41
PCNX4-204ENST00000406949 PPIL6Q8IXY8 311 aa12.46□□□□□ -0.41
PCNX4-204ENST00000406949 C12orf29Q8N999 325 aa12.46□□□□□ -0.41
PCNX4-204ENST00000406949 RXFP2Q8WXD0 754 aa12.46□□□□□ -0.41
PCNX4-204ENST00000406949 C12orf65Q9H3J6 166 aaKnown RBP12.46□□□□□ -0.41
PCNX4-204ENST00000406949 DHX35Q9H5Z1 703 aaKnown RBP12.46□□□□□ -0.41
PCNX4-204ENST00000406949 PCDH9Q9HC56 1237 aa12.46□□□□□ -0.41
PCNX4-204ENST00000406949 CPSF3Q9UKF6 684 aaKnown RBP12.46□□□□□ -0.41
PCNX4-204ENST00000406949 KAT6AQ92794 2004 aa12.46□□□□□ -0.42
PCNX4-204ENST00000406949 A0A1W2PPM1 405 aa12.46□□□□□ -0.42
PCNX4-204ENST00000406949 GPR25O00155 361 aa12.46□□□□□ -0.42
PCNX4-204ENST00000406949 LRCH4O75427 683 aa12.46□□□□□ -0.42
PCNX4-204ENST00000406949 SLC25A27O95847 323 aa12.46□□□□□ -0.42
PCNX4-204ENST00000406949 IVDP26440 423 aa12.46□□□□□ -0.42
PCNX4-204ENST00000406949 TNFAIP2Q03169 654 aa12.46□□□□□ -0.42
PCNX4-204ENST00000406949 NR1H3Q13133 447 aa12.46□□□□□ -0.42
PCNX4-204ENST00000406949 MPP2Q14168 576 aa12.46□□□□□ -0.42
PCNX4-204ENST00000406949 GOLGA7BQ2TAP0 167 aa12.46□□□□□ -0.42
PCNX4-204ENST00000406949 PCGF5Q86SE9 256 aa12.46□□□□□ -0.42
PCNX4-204ENST00000406949 ANKRD13AQ8IZ07 590 aa12.46□□□□□ -0.42
PCNX4-204ENST00000406949 CKAP2Q8WWK9 683 aa12.46□□□□□ -0.42
PCNX4-204ENST00000406949 SLC10A4Q96EP9 437 aa12.46□□□□□ -0.42
PCNX4-204ENST00000406949 LRRC37BQ96QE4 947 aa12.46□□□□□ -0.42
PCNX4-204ENST00000406949 TRIM33Q9UPN9 1127 aa12.46□□□□□ -0.42
PCNX4-204ENST00000406949 STYXL1Q9Y6J8 313 aa12.46□□□□□ -0.42
PCNX4-204ENST00000406949 IL18RAPO95256 599 aa12.45□□□□□ -0.42
PCNX4-204ENST00000406949 ERBB2P04626 1255 aa12.45□□□□□ -0.42
PCNX4-204ENST00000406949 LCP1P13796 627 aa12.45□□□□□ -0.42
PCNX4-204ENST00000406949 CALRP27797 417 aaKnown RBP12.45□□□□□ -0.42
PCNX4-204ENST00000406949 RPA3P35244 121 aaPredicted RBP12.45□□□□□ -0.42
PCNX4-204ENST00000406949 CDKN2BP42772 138 aa12.45□□□□□ -0.42
PCNX4-204ENST00000406949 GDF10P55107 478 aa12.45□□□□□ -0.42
PCNX4-204ENST00000406949 KLF1Q13351 362 aaPredicted RBP12.45□□□□□ -0.42
PCNX4-204ENST00000406949 ANKRD22Q5VYY1 191 aa12.45□□□□□ -0.42
PCNX4-204ENST00000406949 ERO1BQ86YB8 467 aa12.45□□□□□ -0.42
PCNX4-204ENST00000406949 UNC45BQ8IWX7 931 aa12.45□□□□□ -0.42
PCNX4-204ENST00000406949 GPC2Q8N158 579 aa12.45□□□□□ -0.42
PCNX4-204ENST00000406949 C1orf127Q8N9H9 656 aa12.45□□□□□ -0.42
PCNX4-204ENST00000406949 OPTNQ96CV9 577 aa12.45□□□□□ -0.42
PCNX4-204ENST00000406949 TMEM109Q9BVC6 243 aa12.45□□□□□ -0.42
PCNX4-204ENST00000406949 TXNRD2Q9NNW7 524 aa12.45□□□□□ -0.42
PCNX4-204ENST00000406949 WDR35Q9P2L0 1181 aa12.45□□□□□ -0.42
PCNX4-204ENST00000406949 GGA2Q9UJY4 613 aa12.45□□□□□ -0.42
PCNX4-204ENST00000406949 PHTF1Q9UMS5 762 aa12.45□□□□□ -0.42
PCNX4-204ENST00000406949 C5orf60A6NFR6 353 aa12.45□□□□□ -0.42
PCNX4-204ENST00000406949 E5RJQ4 531 aa12.45□□□□□ -0.42
PCNX4-204ENST00000406949 NDC80O14777 642 aa12.45□□□□□ -0.42
PCNX4-204ENST00000406949 GAS2O43903 313 aaKnown RBP12.45□□□□□ -0.42
PCNX4-204ENST00000406949 PIGRP01833 764 aa12.45□□□□□ -0.42
PCNX4-204ENST00000406949 HOXC6P09630 235 aa12.45□□□□□ -0.42
PCNX4-204ENST00000406949 GPD1P21695 349 aa12.45□□□□□ -0.42
PCNX4-204ENST00000406949 KDELR1P24390 212 aa12.45□□□□□ -0.42
PCNX4-204ENST00000406949 KCNJ2P63252 427 aa12.45□□□□□ -0.42
PCNX4-204ENST00000406949 TFDP2Q14188 446 aa12.45□□□□□ -0.42
PCNX4-204ENST00000406949 PPP2R5DQ14738 602 aa12.45□□□□□ -0.42
PCNX4-204ENST00000406949 NAA25Q14CX7 972 aa12.45□□□□□ -0.42
PCNX4-204ENST00000406949 GBP7Q8N8V2 638 aaPredicted RBP12.45□□□□□ -0.42
PCNX4-204ENST00000406949 MAGEB18Q96M61 343 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms