RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 SPATA2LQ8IUW3 424 aaPredicted RBP21.65■■□□□ 1.06
CHKB-201ENST00000406938 MCOLN2Q8IZK6 566 aa21.65■■□□□ 1.06
CHKB-201ENST00000406938 FBXO22Q8NEZ5 403 aa21.65■■□□□ 1.06
CHKB-201ENST00000406938 AUTS2Q8WXX7 1259 aa21.65■■□□□ 1.06
CHKB-201ENST00000406938 CTNNBL1Q8WYA6 563 aaPredicted RBP21.65■■□□□ 1.06
CHKB-201ENST00000406938 SMARCD1Q96GM5 515 aa21.65■■□□□ 1.06
CHKB-201ENST00000406938 CPXM1Q96SM3 734 aa21.65■■□□□ 1.06
CHKB-201ENST00000406938 DUSP16Q9BY84 665 aa21.65■■□□□ 1.06
CHKB-201ENST00000406938 ESPNB1AK53 854 aa21.64■■□□□ 1.05
CHKB-201ENST00000406938 PJA2O43164 708 aa21.64■■□□□ 1.05
CHKB-201ENST00000406938 ATMINO43313 823 aaPredicted RBP21.64■■□□□ 1.05
CHKB-201ENST00000406938 CAPN15O75808 1086 aa21.64■■□□□ 1.05
CHKB-201ENST00000406938 AP1G2O75843 785 aa21.64■■□□□ 1.05
CHKB-201ENST00000406938 ABL1P00519 1130 aa21.64■■□□□ 1.05
CHKB-201ENST00000406938 CACNA2D1P54289 1103 aa21.64■■□□□ 1.05
CHKB-201ENST00000406938 KIF5AQ12840 1032 aa21.64■■□□□ 1.05
CHKB-201ENST00000406938 NFE2Q16621 373 aaPredicted RBP21.64■■□□□ 1.05
CHKB-201ENST00000406938 CLEC20AQ6ZU45 233 aa21.64■■□□□ 1.05
CHKB-201ENST00000406938 TDHQ8IZJ6 230 aa21.64■■□□□ 1.05
CHKB-201ENST00000406938 SLC35F5Q8WV83 523 aa21.64■■□□□ 1.05
CHKB-201ENST00000406938 ZNF653Q96CK0 615 aa21.64■■□□□ 1.05
CHKB-201ENST00000406938 PGLYRP2Q96PD5 576 aa21.64■■□□□ 1.05
CHKB-201ENST00000406938 NOX5Q96PH1 765 aa21.64■■□□□ 1.05
CHKB-201ENST00000406938 ALG13Q9NP73 1137 aaKnown RBP21.64■■□□□ 1.05
CHKB-201ENST00000406938 TMEM30AQ9NV96 361 aa21.64■■□□□ 1.05
CHKB-201ENST00000406938 ADAM22Q9P0K1 906 aa21.64■■□□□ 1.05
CHKB-201ENST00000406938 PLXNA4Q9HCM2 1894 aa21.64■■□□□ 1.05
CHKB-201ENST00000406938 ADAM12O43184 909 aa21.63■■□□□ 1.05
CHKB-201ENST00000406938 BEST1O76090 585 aa21.63■■□□□ 1.05
CHKB-201ENST00000406938 BDNFP23560 247 aa21.63■■□□□ 1.05
CHKB-201ENST00000406938 SLC8A3P57103 927 aa21.63■■□□□ 1.05
CHKB-201ENST00000406938 TAP1Q03518 808 aa21.63■■□□□ 1.05
CHKB-201ENST00000406938 C1QBPQ07021 282 aaKnown RBP21.63■■□□□ 1.05
CHKB-201ENST00000406938 PTP4A2Q12974 167 aa21.63■■□□□ 1.05
CHKB-201ENST00000406938 ARHGAP29Q52LW3 1261 aa21.63■■□□□ 1.05
CHKB-201ENST00000406938 PMF1Q6P1K2 205 aa21.63■■□□□ 1.05
CHKB-201ENST00000406938 ZNF662Q6ZS27 426 aa21.63■■□□□ 1.05
CHKB-201ENST00000406938 ERICH1Q86X53 443 aa21.63■■□□□ 1.05
CHKB-201ENST00000406938 ARHGEF26Q96DR7 871 aa21.63■■□□□ 1.05
CHKB-201ENST00000406938 TRIM11Q96F44 468 aa21.63■■□□□ 1.05
CHKB-201ENST00000406938 TGS1Q96RS0 853 aaKnown RBP21.63■■□□□ 1.05
CHKB-201ENST00000406938 TSGA10Q9BZW7 698 aa21.63■■□□□ 1.05
CHKB-201ENST00000406938 MRPL17Q9NRX2 175 aaKnown RBP21.63■■□□□ 1.05
CHKB-201ENST00000406938 ABI2Q9NYB9 513 aaPredicted RBP21.63■■□□□ 1.05
CHKB-201ENST00000406938 TJP2Q9UDY2 1190 aa21.63■■□□□ 1.05
CHKB-201ENST00000406938 LZTS1Q9Y250 596 aa21.63■■□□□ 1.05
CHKB-201ENST00000406938 DUSP10Q9Y6W6 482 aa21.63■■□□□ 1.05
CHKB-201ENST00000406938 LAMA3Q16787 3333 aa21.63■■□□□ 1.05
CHKB-201ENST00000406938 XPO1O14980 1071 aaKnown RBP21.62■■□□□ 1.05
CHKB-201ENST00000406938 CTSAP10619 480 aa21.62■■□□□ 1.05
CHKB-201ENST00000406938 OR1D2P34982 312 aa21.62■■□□□ 1.05
CHKB-201ENST00000406938 PLA2G4AP47712 749 aa21.62■■□□□ 1.05
CHKB-201ENST00000406938 RGS7P49802 495 aa21.62■■□□□ 1.05
CHKB-201ENST00000406938 MAP3K7CLP57077 242 aa21.62■■□□□ 1.05
CHKB-201ENST00000406938 GPR17Q13304 367 aa21.62■■□□□ 1.05
CHKB-201ENST00000406938 PTPN14Q15678 1187 aa21.62■■□□□ 1.05
CHKB-201ENST00000406938 CFAP221Q4G0U5 840 aa21.62■■□□□ 1.05
CHKB-201ENST00000406938 SMOQ99835 787 aa21.62■■□□□ 1.05
CHKB-201ENST00000406938 CLSTN3Q9BQT9 956 aa21.62■■□□□ 1.05
CHKB-201ENST00000406938 C11orf84Q9BUA3 381 aaPredicted RBP21.62■■□□□ 1.05
CHKB-201ENST00000406938 ST7Q9NRC1 585 aa21.62■■□□□ 1.05
CHKB-201ENST00000406938 GOLGA6L9A6NEM1 432 aa21.62■■□□□ 1.05
CHKB-201ENST00000406938 KRT86O43790 486 aa21.62■■□□□ 1.05
CHKB-201ENST00000406938 ERBB2P04626 1255 aa21.62■■□□□ 1.05
CHKB-201ENST00000406938 CALB1P05937 261 aa21.62■■□□□ 1.05
CHKB-201ENST00000406938 MYBL1P10243 752 aa21.62■■□□□ 1.05
CHKB-201ENST00000406938 GPC5P78333 572 aa21.62■■□□□ 1.05
CHKB-201ENST00000406938 ROR1Q01973 937 aa21.62■■□□□ 1.05
CHKB-201ENST00000406938 RAB30Q15771 203 aa21.62■■□□□ 1.05
CHKB-201ENST00000406938 RNF19BQ6ZMZ0 732 aa21.62■■□□□ 1.05
CHKB-201ENST00000406938 GPR65Q8IYL9 337 aa21.62■■□□□ 1.05
CHKB-201ENST00000406938 MSANTD4Q8NCY6 345 aa21.62■■□□□ 1.05
CHKB-201ENST00000406938 ZMIZ2Q8NF64 920 aa21.62■■□□□ 1.05
CHKB-201ENST00000406938 IPO4Q8TEX9 1081 aaKnown RBP21.62■■□□□ 1.05
CHKB-201ENST00000406938 STK32AQ8WU08 396 aa21.62■■□□□ 1.05
CHKB-201ENST00000406938 FUBP3Q96I24 572 aaKnown RBP eCLIP21.62■■□□□ 1.05
CHKB-201ENST00000406938 VCPIP1Q96JH7 1222 aa21.62■■□□□ 1.05
CHKB-201ENST00000406938 SAMD11Q96NU1 681 aa21.62■■□□□ 1.05
CHKB-201ENST00000406938 NKX2-4Q9H2Z4 354 aa21.62■■□□□ 1.05
CHKB-201ENST00000406938 SYNCQ9H7C4 482 aa21.62■■□□□ 1.05
CHKB-201ENST00000406938 CSNK1G1Q9HCP0 422 aa21.62■■□□□ 1.05
CHKB-201ENST00000406938 MSRAQ9UJ68 235 aa21.62■■□□□ 1.05
CHKB-201ENST00000406938 GUCA1BQ9UMX6 200 aa21.62■■□□□ 1.05
CHKB-201ENST00000406938 PCDHB5Q9Y5E4 795 aa21.62■■□□□ 1.05
CHKB-201ENST00000406938 NCANO14594 1321 aa21.62■■□□□ 1.05
CHKB-201ENST00000406938 WDR27A2RRH5 827 aa21.61■■□□□ 1.05
CHKB-201ENST00000406938 MTMR11A4FU01 709 aa21.61■■□□□ 1.05
CHKB-201ENST00000406938 E5RJQ4 531 aa21.61■■□□□ 1.05
CHKB-201ENST00000406938 RB1P06400 928 aa21.61■■□□□ 1.05
CHKB-201ENST00000406938 RRM1P23921 792 aa21.61■■□□□ 1.05
CHKB-201ENST00000406938 CYP2F1P24903 491 aa21.61■■□□□ 1.05
CHKB-201ENST00000406938 CA8P35219 290 aa21.61■■□□□ 1.05
CHKB-201ENST00000406938 ERVK-21P61565 698 aa21.61■■□□□ 1.05
CHKB-201ENST00000406938 SMARCB1Q12824 385 aa21.61■■□□□ 1.05
CHKB-201ENST00000406938 CYP4A22Q5TCH4 519 aa21.61■■□□□ 1.05
CHKB-201ENST00000406938 LLGL2Q6P1M3 1020 aa21.61■■□□□ 1.05
CHKB-201ENST00000406938 PIGZQ86VD9 579 aa21.61■■□□□ 1.05
CHKB-201ENST00000406938 ATAD1Q8NBU5 361 aa21.61■■□□□ 1.05
CHKB-201ENST00000406938 SPPL3Q8TCT6 385 aa21.61■■□□□ 1.05
CHKB-201ENST00000406938 POF1BQ8WVV4 589 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms