RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 WEE2P0C1S8 567 aa11.25□□□□□ -0.61
CLIP4-204ENST00000404424 CALB2P22676 271 aa11.25□□□□□ -0.61
CLIP4-204ENST00000404424 IL1R2P27930 398 aa11.25□□□□□ -0.61
CLIP4-204ENST00000404424 STIP1P31948 543 aaKnown RBP11.25□□□□□ -0.61
CLIP4-204ENST00000404424 ASPAP45381 313 aa11.25□□□□□ -0.61
CLIP4-204ENST00000404424 DYNLT1P63172 113 aa11.25□□□□□ -0.61
CLIP4-204ENST00000404424 MXD4Q14582 209 aaPredicted RBP11.25□□□□□ -0.61
CLIP4-204ENST00000404424 ANKRD20A2Q5SQ80 823 aa11.25□□□□□ -0.61
CLIP4-204ENST00000404424 ANKRD20A1Q5TYW2 823 aa11.25□□□□□ -0.61
CLIP4-204ENST00000404424 ANKRD20A3Q5VUR7 823 aa11.25□□□□□ -0.61
CLIP4-204ENST00000404424 ZBTB33Q86T24 672 aa11.25□□□□□ -0.61
CLIP4-204ENST00000404424 ZBTB8OSQ8IWT0 167 aa11.25□□□□□ -0.61
CLIP4-204ENST00000404424 ARFGAP1Q8N6T3 406 aa11.25□□□□□ -0.61
CLIP4-204ENST00000404424 CFAP61Q8NHU2 1237 aa11.25□□□□□ -0.61
CLIP4-204ENST00000404424 TCP10LQ8TDR4 215 aa11.25□□□□□ -0.61
CLIP4-204ENST00000404424 DCAKDQ8WVC6 231 aa11.25□□□□□ -0.61
CLIP4-204ENST00000404424 PRPF31Q8WWY3 499 aaKnown RBP11.25□□□□□ -0.61
CLIP4-204ENST00000404424 ANKRD36BP1Q96IX9 119 aa11.25□□□□□ -0.61
CLIP4-204ENST00000404424 FAM167AQ96KS9 214 aa11.25□□□□□ -0.61
CLIP4-204ENST00000404424 ZNF570Q96NI8 536 aa11.25□□□□□ -0.61
CLIP4-204ENST00000404424 WRNIP1Q96S55 665 aa11.25□□□□□ -0.61
CLIP4-204ENST00000404424 CYTH2Q99418 400 aa11.25□□□□□ -0.61
CLIP4-204ENST00000404424 PCYT2Q99447 389 aa11.25□□□□□ -0.61
CLIP4-204ENST00000404424 TBC1D10AQ9BXI6 508 aa11.25□□□□□ -0.61
CLIP4-204ENST00000404424 XYLT2Q9H1B5 865 aa11.25□□□□□ -0.61
CLIP4-204ENST00000404424 C2orf40Q9H1Z8 148 aa11.25□□□□□ -0.61
CLIP4-204ENST00000404424 TLE6Q9H808 572 aa11.25□□□□□ -0.61
CLIP4-204ENST00000404424 SUFUQ9UMX1 484 aa11.25□□□□□ -0.61
CLIP4-204ENST00000404424 B4GALT4O60513 344 aa11.25□□□□□ -0.61
CLIP4-204ENST00000404424 BANF1O75531 89 aa11.25□□□□□ -0.61
CLIP4-204ENST00000404424 FARP2O94887 1054 aaPredicted RBP11.25□□□□□ -0.61
CLIP4-204ENST00000404424 LUC7L3O95232 432 aaKnown RBP11.25□□□□□ -0.61
CLIP4-204ENST00000404424 HOXC6P09630 235 aa11.25□□□□□ -0.61
CLIP4-204ENST00000404424 FGFR1P11362 822 aa11.25□□□□□ -0.61
CLIP4-204ENST00000404424 UBA1P22314 1058 aaKnown RBP11.25□□□□□ -0.61
CLIP4-204ENST00000404424 PSMC1P62191 440 aaKnown RBP11.25□□□□□ -0.61
CLIP4-204ENST00000404424 MAPK6Q16659 721 aa11.25□□□□□ -0.61
CLIP4-204ENST00000404424 SMTNL2Q2TAL5 461 aa11.25□□□□□ -0.61
CLIP4-204ENST00000404424 MSS51Q4VC12 460 aa11.25□□□□□ -0.61
CLIP4-204ENST00000404424 TAF1BQ53T94 588 aaPredicted RBP11.25□□□□□ -0.61
CLIP4-204ENST00000404424 DENND1BQ6P3S1 775 aa11.25□□□□□ -0.61
CLIP4-204ENST00000404424 ZNF276Q8N554 614 aa11.25□□□□□ -0.61
CLIP4-204ENST00000404424 FAM13CQ8NE31 585 aa11.25□□□□□ -0.61
CLIP4-204ENST00000404424 CMASQ8NFW8 434 aaPredicted RBP11.25□□□□□ -0.61
CLIP4-204ENST00000404424 MANSC1Q9H8J5 431 aa11.25□□□□□ -0.61
CLIP4-204ENST00000404424 SAE1Q9UBE0 346 aaPredicted RBP11.25□□□□□ -0.61
CLIP4-204ENST00000404424 SSC5DA1L4H1 1573 aa11.24□□□□□ -0.61
CLIP4-204ENST00000404424 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.24□□□□□ -0.61
CLIP4-204ENST00000404424 TTLL13PA6NNM8 815 aa11.24□□□□□ -0.61
CLIP4-204ENST00000404424 SPDYE16A6NNV3 312 aaPredicted RBP11.24□□□□□ -0.61
CLIP4-204ENST00000404424 ABLIM1O14639 778 aa11.24□□□□□ -0.61
CLIP4-204ENST00000404424 LIN7AO14910 233 aaPredicted RBP11.24□□□□□ -0.61
CLIP4-204ENST00000404424 MCF2LO15068 1137 aa11.24□□□□□ -0.61
CLIP4-204ENST00000404424 SPAG6O75602 509 aa11.24□□□□□ -0.61
CLIP4-204ENST00000404424 TGDSO95455 350 aa11.24□□□□□ -0.61
CLIP4-204ENST00000404424 LMNAP02545 664 aaKnown RBP11.24□□□□□ -0.61
CLIP4-204ENST00000404424 PRKCBP05771 671 aa11.24□□□□□ -0.61
CLIP4-204ENST00000404424 GNAZP19086 355 aa11.24□□□□□ -0.61
CLIP4-204ENST00000404424 ADRA1DP25100 572 aa11.24□□□□□ -0.61
CLIP4-204ENST00000404424 TFAMQ00059 246 aaKnown RBP11.24□□□□□ -0.61
CLIP4-204ENST00000404424 CBLBQ13191 982 aa11.24□□□□□ -0.61
CLIP4-204ENST00000404424 DPYSL3Q14195 570 aa11.24□□□□□ -0.61
CLIP4-204ENST00000404424 KCNT1Q5JUK3 1230 aa11.24□□□□□ -0.61
CLIP4-204ENST00000404424 ZNF772Q68DY9 489 aaPredicted RBP11.24□□□□□ -0.61
CLIP4-204ENST00000404424 BZW1Q7L1Q6 419 aaKnown RBP11.24□□□□□ -0.61
CLIP4-204ENST00000404424 LONP2Q86WA8 852 aa11.24□□□□□ -0.61
CLIP4-204ENST00000404424 CHSY1Q86X52 802 aa11.24□□□□□ -0.61
CLIP4-204ENST00000404424 ENDOVQ8N8Q3 282 aaKnown RBP11.24□□□□□ -0.61
CLIP4-204ENST00000404424 KCTD6Q8NC69 237 aa11.24□□□□□ -0.61
CLIP4-204ENST00000404424 JOSD2Q8TAC2 188 aa11.24□□□□□ -0.61
CLIP4-204ENST00000404424 FBXO41Q8TF61 875 aa11.24□□□□□ -0.61
CLIP4-204ENST00000404424 STK32AQ8WU08 396 aa11.24□□□□□ -0.61
CLIP4-204ENST00000404424 WDR83Q9BRX9 315 aaKnown RBP11.24□□□□□ -0.61
CLIP4-204ENST00000404424 RSAD1Q9HA92 442 aa11.24□□□□□ -0.61
CLIP4-204ENST00000404424 NPHS2Q9NP85 383 aa11.24□□□□□ -0.61
CLIP4-204ENST00000404424 XPO7Q9UIA9 1087 aaKnown RBP11.24□□□□□ -0.61
CLIP4-204ENST00000404424 TNS1Q9HBL0 1735 aaKnown RBP11.24□□□□□ -0.61
CLIP4-204ENST00000404424 RNF8O76064 485 aa11.24□□□□□ -0.61
CLIP4-204ENST00000404424 MT-ND3P03897 115 aa11.24□□□□□ -0.61
CLIP4-204ENST00000404424 TGFB3P10600 412 aa11.24□□□□□ -0.61
CLIP4-204ENST00000404424 CD19P15391 556 aa11.24□□□□□ -0.61
CLIP4-204ENST00000404424 EIF3EP60228 445 aaKnown RBP11.24□□□□□ -0.61
CLIP4-204ENST00000404424 GAD2Q05329 585 aa11.24□□□□□ -0.61
CLIP4-204ENST00000404424 EFTUD2Q15029 972 aaKnown RBP eCLIP11.24□□□□□ -0.61
CLIP4-204ENST00000404424 BBS9Q3SYG4 887 aa11.24□□□□□ -0.61
CLIP4-204ENST00000404424 ZNF449Q6P9G9 518 aa11.24□□□□□ -0.61
CLIP4-204ENST00000404424 SCARA5Q6ZMJ2 495 aa11.24□□□□□ -0.61
CLIP4-204ENST00000404424 CLNKQ7Z7G1 428 aa11.24□□□□□ -0.61
CLIP4-204ENST00000404424 XYLT1Q86Y38 959 aa11.24□□□□□ -0.61
CLIP4-204ENST00000404424 RFX6Q8HWS3 928 aa11.24□□□□□ -0.61
CLIP4-204ENST00000404424 UNC45BQ8IWX7 931 aa11.24□□□□□ -0.61
CLIP4-204ENST00000404424 KIAA0319LQ8IZA0 1049 aa11.24□□□□□ -0.61
CLIP4-204ENST00000404424 SEPT1Q8WYJ6 367 aa11.24□□□□□ -0.61
CLIP4-204ENST00000404424 TRIM55Q9BYV6 548 aa11.24□□□□□ -0.61
CLIP4-204ENST00000404424 PEX11AO75192 247 aa11.23□□□□□ -0.61
CLIP4-204ENST00000404424 TMEM63AO94886 807 aa11.23□□□□□ -0.61
CLIP4-204ENST00000404424 CBX6O95503 412 aa11.23□□□□□ -0.61
CLIP4-204ENST00000404424 IL1BP01584 269 aa11.23□□□□□ -0.61
CLIP4-204ENST00000404424 RBP3P10745 1247 aa11.23□□□□□ -0.61
CLIP4-204ENST00000404424 PROZP22891 400 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms