RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 EDEM3Q9BZQ6 932 aa31.12■■■□□ 2.57
USP42-202ENST00000404008 O00370 1275 aa31.11■■■□□ 2.57
USP42-202ENST00000404008 POU2F2P09086 479 aa31.11■■■□□ 2.57
USP42-202ENST00000404008 KCNA5P22460 613 aa31.11■■■□□ 2.57
USP42-202ENST00000404008 BRD2P25440 801 aaKnown RBP31.11■■■□□ 2.57
USP42-202ENST00000404008 GNA15P30679 374 aa31.11■■■□□ 2.57
USP42-202ENST00000404008 SOX5P35711 763 aa31.11■■■□□ 2.57
USP42-202ENST00000404008 RPL10AP62906 217 aaKnown RBP31.11■■■□□ 2.57
USP42-202ENST00000404008 TMC5Q6UXY8 1006 aa31.11■■■□□ 2.57
USP42-202ENST00000404008 FEZF2Q8TBJ5 459 aa31.11■■■□□ 2.57
USP42-202ENST00000404008 S1PR5Q9H228 398 aa31.11■■■□□ 2.57
USP42-202ENST00000404008 COG5Q9UP83 839 aa31.11■■■□□ 2.57
USP42-202ENST00000404008 C5orf42Q9H799 3197 aa31.1■■■□□ 2.57
USP42-202ENST00000404008 CCL16O15467 120 aa31.1■■■□□ 2.57
USP42-202ENST00000404008 AP1G2O75843 785 aa31.1■■■□□ 2.57
USP42-202ENST00000404008 GRIK1P39086 918 aa31.1■■■□□ 2.57
USP42-202ENST00000404008 STAT1P42224 750 aa31.1■■■□□ 2.57
USP42-202ENST00000404008 GPR15P49685 360 aa31.1■■■□□ 2.57
USP42-202ENST00000404008 PTK2Q05397 1052 aa31.1■■■□□ 2.57
USP42-202ENST00000404008 DDR2Q16832 855 aa31.1■■■□□ 2.57
USP42-202ENST00000404008 SPECC1LQ69YQ0 1117 aa31.1■■■□□ 2.57
USP42-202ENST00000404008 SLC47A2Q86VL8 602 aa31.1■■■□□ 2.57
USP42-202ENST00000404008 SCN4BQ8IWT1 228 aa31.1■■■□□ 2.57
USP42-202ENST00000404008 IQCDQ96DY2 449 aa31.1■■■□□ 2.57
USP42-202ENST00000404008 APOL5Q9BWW9 433 aa31.1■■■□□ 2.57
USP42-202ENST00000404008 CSNK1G1Q9HCP0 422 aa31.1■■■□□ 2.57
USP42-202ENST00000404008 TSPAN16Q9UKR8 245 aa31.1■■■□□ 2.57
USP42-202ENST00000404008 MYO6Q9UM54 1294 aa31.1■■■□□ 2.57
USP42-202ENST00000404008 A0A1W2PQJ5 194 aa31.09■■■□□ 2.57
USP42-202ENST00000404008 H3BQ06 376 aaPredicted RBP31.09■■■□□ 2.57
USP42-202ENST00000404008 TRIM66O15016 1216 aa31.09■■■□□ 2.57
USP42-202ENST00000404008 GFPT2O94808 682 aa31.09■■■□□ 2.57
USP42-202ENST00000404008 FAM200BP0CF97 657 aa31.09■■■□□ 2.57
USP42-202ENST00000404008 ZNF75DP51815 510 aa31.09■■■□□ 2.57
USP42-202ENST00000404008 EPHB3P54753 998 aa31.09■■■□□ 2.57
USP42-202ENST00000404008 STILQ15468 1287 aa31.09■■■□□ 2.57
USP42-202ENST00000404008 CNGA2Q16280 664 aa31.09■■■□□ 2.57
USP42-202ENST00000404008 GOLGA7BQ2TAP0 167 aa31.09■■■□□ 2.57
USP42-202ENST00000404008 LCLAT1Q6UWP7 414 aa31.09■■■□□ 2.57
USP42-202ENST00000404008 SMRP1Q8NCR6 262 aa31.09■■■□□ 2.57
USP42-202ENST00000404008 C8orf48Q96LL4 319 aa31.09■■■□□ 2.57
USP42-202ENST00000404008 DMAP1Q9NPF5 467 aaPredicted RBP31.09■■■□□ 2.57
USP42-202ENST00000404008 CD207Q9UJ71 328 aa31.09■■■□□ 2.57
USP42-202ENST00000404008 WDR3Q9UNX4 943 aaKnown RBP eCLIP31.09■■■□□ 2.57
USP42-202ENST00000404008 F8VP50 259 aa31.08■■■□□ 2.57
USP42-202ENST00000404008 XYLBO75191 536 aa31.08■■■□□ 2.57
USP42-202ENST00000404008 BEST1O76090 585 aa31.08■■■□□ 2.57
USP42-202ENST00000404008 BPIFB4P59827 614 aa31.08■■■□□ 2.57
USP42-202ENST00000404008 ITIH3Q06033 890 aa31.08■■■□□ 2.57
USP42-202ENST00000404008 CLUL1Q15846 466 aa31.08■■■□□ 2.57
USP42-202ENST00000404008 CLEC20AQ6ZU45 233 aa31.08■■■□□ 2.57
USP42-202ENST00000404008 GPR149Q86SP6 731 aa31.08■■■□□ 2.57
USP42-202ENST00000404008 ANKRD52Q8NB46 1076 aa31.08■■■□□ 2.57
USP42-202ENST00000404008 ZNF606Q8WXB4 792 aa31.08■■■□□ 2.57
USP42-202ENST00000404008 KCNK16Q96T55 309 aa31.08■■■□□ 2.57
USP42-202ENST00000404008 SMOQ99835 787 aa31.08■■■□□ 2.57
USP42-202ENST00000404008 DUSP16Q9BY84 665 aa31.08■■■□□ 2.57
USP42-202ENST00000404008 ADAM7Q9H2U9 754 aa31.08■■■□□ 2.57
USP42-202ENST00000404008 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP31.08■■■□□ 2.57
USP42-202ENST00000404008 THAP12O43422 761 aa31.07■■■□□ 2.56
USP42-202ENST00000404008 GYPCP04921 128 aa31.07■■■□□ 2.56
USP42-202ENST00000404008 NPR3P17342 541 aa31.07■■■□□ 2.56
USP42-202ENST00000404008 SDHAF4Q5VUM1 108 aa31.07■■■□□ 2.56
USP42-202ENST00000404008 CYP26C1Q6V0L0 522 aa31.07■■■□□ 2.56
USP42-202ENST00000404008 TTC30AQ86WT1 665 aa31.07■■■□□ 2.56
USP42-202ENST00000404008 ZMIZ2Q8NF64 920 aa31.07■■■□□ 2.56
USP42-202ENST00000404008 GPR152Q8TDT2 470 aa31.07■■■□□ 2.56
USP42-202ENST00000404008 SMG7Q92540 1137 aaKnown RBP31.07■■■□□ 2.56
USP42-202ENST00000404008 MRFAP1L1Q96HT8 127 aa31.07■■■□□ 2.56
USP42-202ENST00000404008 SPATA17Q96L03 361 aa31.07■■■□□ 2.56
USP42-202ENST00000404008 CEP295NLQ96MC4 621 aa31.07■■■□□ 2.56
USP42-202ENST00000404008 LRRC53A6NM62 1247 aa31.06■■■□□ 2.56
USP42-202ENST00000404008 MED7O43513 233 aa31.06■■■□□ 2.56
USP42-202ENST00000404008 CYP11B1P15538 503 aa31.06■■■□□ 2.56
USP42-202ENST00000404008 ANXA13P27216 316 aa31.06■■■□□ 2.56
USP42-202ENST00000404008 MAP3K7CLP57077 242 aa31.06■■■□□ 2.56
USP42-202ENST00000404008 ELMOD1Q8N336 334 aa31.06■■■□□ 2.56
USP42-202ENST00000404008 GIPC2Q8TF65 315 aa31.06■■■□□ 2.56
USP42-202ENST00000404008 PRDM6Q9NQX0 595 aa31.06■■■□□ 2.56
USP42-202ENST00000404008 HESX1Q9UBX0 185 aa31.06■■■□□ 2.56
USP42-202ENST00000404008 CAPN11Q9UMQ6 739 aa31.06■■■□□ 2.56
USP42-202ENST00000404008 ASB3Q9Y575 518 aa31.06■■■□□ 2.56
USP42-202ENST00000404008 MICAL2O94851 1124 aa31.05■■■□□ 2.56
USP42-202ENST00000404008 VEPH1Q14D04 833 aa31.05■■■□□ 2.56
USP42-202ENST00000404008 PKDCCQ504Y2 493 aa31.05■■■□□ 2.56
USP42-202ENST00000404008 CES5AQ6NT32 575 aa31.05■■■□□ 2.56
USP42-202ENST00000404008 DENND4AQ7Z401 1863 aa31.05■■■□□ 2.56
USP42-202ENST00000404008 PSMG2Q969U7 264 aa31.05■■■□□ 2.56
USP42-202ENST00000404008 NOTCH4Q99466 2003 aa31.05■■■□□ 2.56
USP42-202ENST00000404008 DOCK6Q96HP0 2047 aa31.05■■■□□ 2.56
USP42-202ENST00000404008 SSTR3P32745 418 aaPredicted RBP31.05■■■□□ 2.56
USP42-202ENST00000404008 PDE6CP51160 858 aa31.05■■■□□ 2.56
USP42-202ENST00000404008 BCAT1P54687 386 aa31.05■■■□□ 2.56
USP42-202ENST00000404008 ITIH5Q86UX2 942 aa31.05■■■□□ 2.56
USP42-202ENST00000404008 GPIHBP1Q8IV16 184 aa31.05■■■□□ 2.56
USP42-202ENST00000404008 STKLD1Q8NE28 680 aa31.05■■■□□ 2.56
USP42-202ENST00000404008 EPS8L1Q8TE68 723 aa31.05■■■□□ 2.56
USP42-202ENST00000404008 ZNF512Q96ME7 567 aaPredicted RBP31.05■■■□□ 2.56
USP42-202ENST00000404008 PIDD1Q9HB75 910 aa31.05■■■□□ 2.56
USP42-202ENST00000404008 HCFC1R1Q9NWW0 138 aa31.05■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms