RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 DGKEP52429 567 aa4.6□□□□□ -1.67
HMGB1P17-201ENST00000403495 COPAP53621 1224 aa4.6□□□□□ -1.67
HMGB1P17-201ENST00000403495 LOXL3P58215 753 aa4.6□□□□□ -1.67
HMGB1P17-201ENST00000403495 RESTQ13127 1097 aa4.6□□□□□ -1.67
HMGB1P17-201ENST00000403495 DYRK1AQ13627 763 aa4.6□□□□□ -1.67
HMGB1P17-201ENST00000403495 TOB2Q14106 344 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P17-201ENST00000403495 POSTNQ15063 836 aa4.6□□□□□ -1.67
HMGB1P17-201ENST00000403495 ZNF750Q32MQ0 723 aa4.6□□□□□ -1.67
HMGB1P17-201ENST00000403495 DEPDC1Q5TB30 811 aa4.6□□□□□ -1.67
HMGB1P17-201ENST00000403495 SULT6B1Q6IMI4 303 aa4.6□□□□□ -1.67
HMGB1P17-201ENST00000403495 CLNKQ7Z7G1 428 aa4.6□□□□□ -1.67
HMGB1P17-201ENST00000403495 ZNF354CQ86Y25 554 aa4.6□□□□□ -1.67
HMGB1P17-201ENST00000403495 SIAH1Q8IUQ4 282 aa4.6□□□□□ -1.67
HMGB1P17-201ENST00000403495 CCDC28AQ8IWP9 274 aa4.6□□□□□ -1.67
HMGB1P17-201ENST00000403495 FAM9AQ8IZU1 332 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P17-201ENST00000403495 OR1N1Q8NGS0 311 aa4.6□□□□□ -1.67
HMGB1P17-201ENST00000403495 CYP2W1Q8TAV3 490 aa4.6□□□□□ -1.67
HMGB1P17-201ENST00000403495 PPM1EQ8WY54 764 aa4.6□□□□□ -1.67
HMGB1P17-201ENST00000403495 EXTL1Q92935 676 aa4.6□□□□□ -1.67
HMGB1P17-201ENST00000403495 TBC1D20Q96BZ9 403 aa4.6□□□□□ -1.67
HMGB1P17-201ENST00000403495 SNX27Q96L92 541 aa4.6□□□□□ -1.67
HMGB1P17-201ENST00000403495 C20orf173Q96LM9 149 aa4.6□□□□□ -1.67
HMGB1P17-201ENST00000403495 MOGAT1Q96PD6 335 aa4.6□□□□□ -1.67
HMGB1P17-201ENST00000403495 DCLRE1CQ96SD1 692 aaKnown RBP4.6□□□□□ -1.67
HMGB1P17-201ENST00000403495 ALOXE3Q9BYJ1 711 aa4.6□□□□□ -1.67
HMGB1P17-201ENST00000403495 AKIP1Q9NQ31 210 aa4.6□□□□□ -1.67
HMGB1P17-201ENST00000403495 XPNPEP3Q9NQH7 507 aa4.6□□□□□ -1.67
HMGB1P17-201ENST00000403495 ITM2CQ9NQX7 267 aa4.6□□□□□ -1.67
HMGB1P17-201ENST00000403495 RNF181Q9P0P0 153 aa4.6□□□□□ -1.67
HMGB1P17-201ENST00000403495 DKK4Q9UBT3 224 aa4.6□□□□□ -1.67
HMGB1P17-201ENST00000403495 HPSEQ9Y251 543 aa4.6□□□□□ -1.67
HMGB1P17-201ENST00000403495 SSX2IPQ9Y2D8 614 aa4.6□□□□□ -1.67
HMGB1P17-201ENST00000403495 GPR52Q9Y2T5 361 aa4.6□□□□□ -1.67
HMGB1P17-201ENST00000403495 PAXBP1Q9Y5B6 917 aa4.6□□□□□ -1.67
HMGB1P17-201ENST00000403495 DGKBQ9Y6T7 804 aa4.6□□□□□ -1.67
HMGB1P17-201ENST00000403495 PRAMEF33A0A0G2JMD5 474 aa4.59□□□□□ -1.67
HMGB1P17-201ENST00000403495 KRTAP23-1A1A580 65 aa4.59□□□□□ -1.67
HMGB1P17-201ENST00000403495 GOLGA6L3A6NEY3 463 aa4.59□□□□□ -1.67
HMGB1P17-201ENST00000403495 AGPSO00116 658 aa4.59□□□□□ -1.67
HMGB1P17-201ENST00000403495 HNRNPDLO14979 420 aaKnown RBP4.59□□□□□ -1.67
HMGB1P17-201ENST00000403495 PLSCR1O15162 318 aa4.59□□□□□ -1.67
HMGB1P17-201ENST00000403495 CYP27B1O15528 508 aa4.59□□□□□ -1.67
HMGB1P17-201ENST00000403495 LPXNO60711 386 aa4.59□□□□□ -1.67
HMGB1P17-201ENST00000403495 PRAMEF10O60809 474 aa4.59□□□□□ -1.67
HMGB1P17-201ENST00000403495 FGAP02671 866 aa4.59□□□□□ -1.67
HMGB1P17-201ENST00000403495 CYP2C9P11712 490 aa4.59□□□□□ -1.67
HMGB1P17-201ENST00000403495 CD6P30203 668 aa4.59□□□□□ -1.67
HMGB1P17-201ENST00000403495 SERPINF1P36955 418 aa4.59□□□□□ -1.67
HMGB1P17-201ENST00000403495 JAG1P78504 1218 aa4.59□□□□□ -1.67
HMGB1P17-201ENST00000403495 SLC25A3Q00325 362 aa4.59□□□□□ -1.67
HMGB1P17-201ENST00000403495 BIRC3Q13489 604 aa4.59□□□□□ -1.67
HMGB1P17-201ENST00000403495 CYP2A13Q16696 494 aa4.59□□□□□ -1.67
HMGB1P17-201ENST00000403495 LY6KQ17RY6 165 aa4.59□□□□□ -1.67
HMGB1P17-201ENST00000403495 INSCQ1MX18 579 aa4.59□□□□□ -1.67
HMGB1P17-201ENST00000403495 HS1BP3Q53T59 392 aa4.59□□□□□ -1.67
HMGB1P17-201ENST00000403495 RABL3Q5HYI8 236 aa4.59□□□□□ -1.67
HMGB1P17-201ENST00000403495 MANEALQ5VSG8 457 aa4.59□□□□□ -1.67
HMGB1P17-201ENST00000403495 KRT28Q7Z3Y7 464 aa4.59□□□□□ -1.67
HMGB1P17-201ENST00000403495 SPATA5Q8NB90 893 aa4.59□□□□□ -1.67
HMGB1P17-201ENST00000403495 CPEB3Q8NE35 698 aaKnown RBP4.59□□□□□ -1.67
HMGB1P17-201ENST00000403495 SLC30A5Q8TAD4 765 aa4.59□□□□□ -1.67
HMGB1P17-201ENST00000403495 SNX19Q92543 992 aa4.59□□□□□ -1.67
HMGB1P17-201ENST00000403495 C8orf49Q96NF6 230 aa4.59□□□□□ -1.67
HMGB1P17-201ENST00000403495 PRPF18Q99633 342 aaKnown RBP4.59□□□□□ -1.67
HMGB1P17-201ENST00000403495 ADAM2Q99965 735 aa4.59□□□□□ -1.67
HMGB1P17-201ENST00000403495 PTDSS2Q9BVG9 487 aa4.59□□□□□ -1.67
HMGB1P17-201ENST00000403495 MLXIPQ9HAP2 919 aa4.59□□□□□ -1.67
HMGB1P17-201ENST00000403495 TM7SF3Q9NS93 570 aa4.59□□□□□ -1.67
HMGB1P17-201ENST00000403495 KCNE5Q9UJ90 142 aa4.59□□□□□ -1.67
HMGB1P17-201ENST00000403495 A0A0B4J269 797 aa4.58□□□□□ -1.68
HMGB1P17-201ENST00000403495 ADM5C9JUS6 153 aa4.58□□□□□ -1.68
HMGB1P17-201ENST00000403495 IPO5O00410 1097 aaKnown RBP4.58□□□□□ -1.68
HMGB1P17-201ENST00000403495 SYT5O00445 386 aa4.58□□□□□ -1.68
HMGB1P17-201ENST00000403495 FCHO1O14526 889 aa4.58□□□□□ -1.68
HMGB1P17-201ENST00000403495 TRIM24O15164 1050 aa4.58□□□□□ -1.68
HMGB1P17-201ENST00000403495 PPM1DO15297 605 aa4.58□□□□□ -1.68
HMGB1P17-201ENST00000403495 CCP110O43303 1012 aa4.58□□□□□ -1.68
HMGB1P17-201ENST00000403495 TLR5O60602 858 aa4.58□□□□□ -1.68
HMGB1P17-201ENST00000403495 RECQL4O94761 1208 aa4.58□□□□□ -1.68
HMGB1P17-201ENST00000403495 ARP10275 920 aa4.58□□□□□ -1.68
HMGB1P17-201ENST00000403495 EGR1P18146 543 aa4.58□□□□□ -1.68
HMGB1P17-201ENST00000403495 ACRV1P26436 265 aa4.58□□□□□ -1.68
HMGB1P17-201ENST00000403495 HNRNPMP52272 730 aaKnown RBP eCLIP4.58□□□□□ -1.68
HMGB1P17-201ENST00000403495 RPS7P62081 194 aaKnown RBP4.58□□□□□ -1.68
HMGB1P17-201ENST00000403495 EIF2B5Q13144 721 aaKnown RBP4.58□□□□□ -1.68
HMGB1P17-201ENST00000403495 TUBB3Q13509 450 aa4.58□□□□□ -1.68
HMGB1P17-201ENST00000403495 HSP90AB4PQ58FF6 505 aa4.58□□□□□ -1.68
HMGB1P17-201ENST00000403495 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.58□□□□□ -1.68
HMGB1P17-201ENST00000403495 FAXCQ5TGI0 409 aa4.58□□□□□ -1.68
HMGB1P17-201ENST00000403495 CHST13Q8NET6 341 aa4.58□□□□□ -1.68
HMGB1P17-201ENST00000403495 IL17DQ8TAD2 202 aa4.58□□□□□ -1.68
HMGB1P17-201ENST00000403495 FAM71BQ8TC56 605 aa4.58□□□□□ -1.68
HMGB1P17-201ENST00000403495 EDAQ92838 391 aa4.58□□□□□ -1.68
HMGB1P17-201ENST00000403495 RILPL2Q969X0 211 aa4.58□□□□□ -1.68
HMGB1P17-201ENST00000403495 LTV1Q96GA3 475 aaPredicted RBP4.58□□□□□ -1.68
HMGB1P17-201ENST00000403495 MED15Q96RN5 788 aa4.58□□□□□ -1.68
HMGB1P17-201ENST00000403495 SLC25A32Q9H2D1 315 aa4.58□□□□□ -1.68
HMGB1P17-201ENST00000403495 UNKLQ9H9P5 680 aaKnown RBP4.58□□□□□ -1.68
HMGB1P17-201ENST00000403495 AGO4Q9HCK5 861 aaKnown RBP4.58□□□□□ -1.68
HMGB1P17-201ENST00000403495 TCAF1Q9Y4C2 921 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms