RNA–Protein interactions for RNA: ENST00000403433.5

CHTOP-205, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHTOP, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-205ENST00000403433 SPRYD7Q5W111 196 aa18.79■□□□□ 0.6
CHTOP-205ENST00000403433 SLC27A1Q6PCB7 646 aa18.79■□□□□ 0.6
CHTOP-205ENST00000403433 KCTD6Q8NC69 237 aa18.79■□□□□ 0.6
CHTOP-205ENST00000403433 SLC35B2Q8TB61 432 aa18.79■□□□□ 0.6
CHTOP-205ENST00000403433 ATXN2LQ8WWM7 1075 aaKnown RBP18.79■□□□□ 0.6
CHTOP-205ENST00000403433 CCDC77Q9BR77 488 aa18.79■□□□□ 0.6
CHTOP-205ENST00000403433 TMEM121Q9BTD3 319 aa18.79■□□□□ 0.6
CHTOP-205ENST00000403433 PCSK1NQ9UHG2 260 aa18.79■□□□□ 0.6
CHTOP-205ENST00000403433 TSPAN16Q9UKR8 245 aa18.79■□□□□ 0.6
CHTOP-205ENST00000403433 TRIP11Q15643 1979 aa18.79■□□□□ 0.6
CHTOP-205ENST00000403433 ADCY6O43306 1168 aa18.78■□□□□ 0.6
CHTOP-205ENST00000403433 CST8O60676 142 aa18.78■□□□□ 0.6
CHTOP-205ENST00000403433 GPD1P21695 349 aa18.78■□□□□ 0.6
CHTOP-205ENST00000403433 MIPP30301 263 aa18.78■□□□□ 0.6
CHTOP-205ENST00000403433 MAGEA4P43358 317 aa18.78■□□□□ 0.6
CHTOP-205ENST00000403433 GPR162Q16538 588 aa18.78■□□□□ 0.6
CHTOP-205ENST00000403433 TAZQ16635 292 aa18.78■□□□□ 0.6
CHTOP-205ENST00000403433 GOLGA7BQ2TAP0 167 aa18.78■□□□□ 0.6
CHTOP-205ENST00000403433 BBS12Q6ZW61 710 aa18.78■□□□□ 0.6
CHTOP-205ENST00000403433 C2orf69Q8N8R5 385 aa18.78■□□□□ 0.6
CHTOP-205ENST00000403433 CHMP6Q96FZ7 201 aa18.78■□□□□ 0.6
CHTOP-205ENST00000403433 SNX27Q96L92 541 aa18.78■□□□□ 0.6
CHTOP-205ENST00000403433 C9orf72Q96LT7 481 aa18.78■□□□□ 0.6
CHTOP-205ENST00000403433 RASSF4Q9H2L5 321 aa18.78■□□□□ 0.6
CHTOP-205ENST00000403433 SNTG2Q9NY99 539 aa18.78■□□□□ 0.6
CHTOP-205ENST00000403433 ITGBL1O95965 494 aaPredicted RBP18.78■□□□□ 0.6
CHTOP-205ENST00000403433 IFNB1P01574 187 aa18.78■□□□□ 0.6
CHTOP-205ENST00000403433 ABHD2P08910 425 aa18.78■□□□□ 0.6
CHTOP-205ENST00000403433 SMIM10L2AP0DMW4 78 aa18.78■□□□□ 0.6
CHTOP-205ENST00000403433 SMIM10L2BP0DMW5 78 aa18.78■□□□□ 0.6
CHTOP-205ENST00000403433 CYP3A5P20815 502 aa18.78■□□□□ 0.6
CHTOP-205ENST00000403433 MAGEA9P43362 315 aa18.78■□□□□ 0.6
CHTOP-205ENST00000403433 ZNF143P52747 638 aaPredicted RBP18.78■□□□□ 0.6
CHTOP-205ENST00000403433 OTUD4Q01804 1114 aaKnown RBP18.78■□□□□ 0.6
CHTOP-205ENST00000403433 STAT4Q14765 748 aa18.78■□□□□ 0.6
CHTOP-205ENST00000403433 NOTUMQ6P988 496 aa18.78■□□□□ 0.6
CHTOP-205ENST00000403433 CPLX4Q7Z7G2 160 aa18.78■□□□□ 0.6
CHTOP-205ENST00000403433 EXOC3L1Q86VI1 746 aa18.78■□□□□ 0.6
CHTOP-205ENST00000403433 ACTL9Q8TC94 416 aa18.78■□□□□ 0.6
CHTOP-205ENST00000403433 HSPH1Q92598 858 aa18.78■□□□□ 0.6
CHTOP-205ENST00000403433 ARHGEF2Q92974 986 aaKnown RBP18.78■□□□□ 0.6
CHTOP-205ENST00000403433 SAYSD1Q9NPB0 183 aa18.78■□□□□ 0.6
CHTOP-205ENST00000403433 USP18Q9UMW8 372 aa18.78■□□□□ 0.6
CHTOP-205ENST00000403433 NRCAMQ92823 1304 aa18.78■□□□□ 0.6
CHTOP-205ENST00000403433 C5orf60A6NFR6 353 aa18.77■□□□□ 0.6
CHTOP-205ENST00000403433 DYNC1LI2O43237 492 aaPredicted RBP18.77■□□□□ 0.6
CHTOP-205ENST00000403433 TRUB2O95900 331 aaKnown RBP18.77■□□□□ 0.6
CHTOP-205ENST00000403433 HOXA11P31270 313 aaPredicted RBP18.77■□□□□ 0.6
CHTOP-205ENST00000403433 RDXP35241 583 aaKnown RBP18.77■□□□□ 0.6
CHTOP-205ENST00000403433 PCK1P35558 622 aa18.77■□□□□ 0.6
CHTOP-205ENST00000403433 PDE4CQ08493 712 aa18.77■□□□□ 0.6
CHTOP-205ENST00000403433 OR6B2Q6IFH4 312 aa18.77■□□□□ 0.6
CHTOP-205ENST00000403433 FAM183BPQ6ZVS7 135 aa18.77■□□□□ 0.6
CHTOP-205ENST00000403433 RFX6Q8HWS3 928 aa18.77■□□□□ 0.6
CHTOP-205ENST00000403433 BEST2Q8NFU1 509 aa18.77■□□□□ 0.6
CHTOP-205ENST00000403433 CFAP57Q96MR6 1250 aa18.77■□□□□ 0.6
CHTOP-205ENST00000403433 TTC25Q96NG3 672 aa18.77■□□□□ 0.6
CHTOP-205ENST00000403433 SHOC2Q9UQ13 582 aa18.77■□□□□ 0.6
CHTOP-205ENST00000403433 SNX9Q9Y5X1 595 aa18.77■□□□□ 0.6
CHTOP-205ENST00000403433 E5RJQ4 531 aa18.76■□□□□ 0.59
CHTOP-205ENST00000403433 GPR32O75388 356 aa18.76■□□□□ 0.59
CHTOP-205ENST00000403433 F2P00734 622 aa18.76■□□□□ 0.59
CHTOP-205ENST00000403433 PECAM1P16284 738 aaPredicted RBP18.76■□□□□ 0.59
CHTOP-205ENST00000403433 PCBP1Q15365 356 aaKnown RBP eCLIP18.76■□□□□ 0.59
CHTOP-205ENST00000403433 QPCTQ16769 361 aa18.76■□□□□ 0.59
CHTOP-205ENST00000403433 RNASEH2BQ5TBB1 312 aaKnown RBP18.76■□□□□ 0.59
CHTOP-205ENST00000403433 CYP4F22Q6NT55 531 aa18.76■□□□□ 0.59
CHTOP-205ENST00000403433 OSMRQ99650 979 aa18.76■□□□□ 0.59
CHTOP-205ENST00000403433 PTPN18Q99952 460 aa18.76■□□□□ 0.59
CHTOP-205ENST00000403433 CNPY3Q9BT09 278 aa18.76■□□□□ 0.59
CHTOP-205ENST00000403433 EIF2AQ9BY44 585 aaKnown RBP18.76■□□□□ 0.59
CHTOP-205ENST00000403433 TRIM6Q9C030 488 aaPredicted RBP18.76■□□□□ 0.59
CHTOP-205ENST00000403433 CTNNAL1Q9UBT7 734 aa18.76■□□□□ 0.59
CHTOP-205ENST00000403433 DDX20Q9UHI6 824 aaKnown RBP18.76■□□□□ 0.59
CHTOP-205ENST00000403433 SCN1AP35498 2009 aa18.76■□□□□ 0.59
CHTOP-205ENST00000403433 A0A087WUV0 522 aaPredicted RBP18.76■□□□□ 0.59
CHTOP-205ENST00000403433 SMIM35A0A1B0GVV1 85 aa18.76■□□□□ 0.59
CHTOP-205ENST00000403433 A6NJR5 290 aa18.76■□□□□ 0.59
CHTOP-205ENST00000403433 PIK3R2O00459 728 aa18.76■□□□□ 0.59
CHTOP-205ENST00000403433 CDH16O75309 829 aa18.76■□□□□ 0.59
CHTOP-205ENST00000403433 CD48P09326 243 aa18.76■□□□□ 0.59
CHTOP-205ENST00000403433 CYP2C9P11712 490 aa18.76■□□□□ 0.59
CHTOP-205ENST00000403433 DRD4P21917 467 aa18.76■□□□□ 0.59
CHTOP-205ENST00000403433 GKAP1Q5VSY0 366 aaPredicted RBP18.76■□□□□ 0.59
CHTOP-205ENST00000403433 PCGF5Q86SE9 256 aa18.76■□□□□ 0.59
CHTOP-205ENST00000403433 OTUD6BQ8N6M0 293 aa18.76■□□□□ 0.59
CHTOP-205ENST00000403433 C12orf29Q8N999 325 aa18.76■□□□□ 0.59
CHTOP-205ENST00000403433 CMASQ8NFW8 434 aaPredicted RBP18.76■□□□□ 0.59
CHTOP-205ENST00000403433 ZMAT2Q96NC0 199 aaKnown RBP18.76■□□□□ 0.59
CHTOP-205ENST00000403433 MRPL45Q9BRJ2 306 aaKnown RBP18.76■□□□□ 0.59
CHTOP-205ENST00000403433 CALN1Q9BXU9 219 aa18.76■□□□□ 0.59
CHTOP-205ENST00000403433 SAE1Q9UBE0 346 aaPredicted RBP18.76■□□□□ 0.59
CHTOP-205ENST00000403433 TUBGCP4Q9UGJ1 667 aa18.76■□□□□ 0.59
CHTOP-205ENST00000403433 LGALS13Q9UHV8 139 aa18.76■□□□□ 0.59
CHTOP-205ENST00000403433 C2CD4BA6NLJ0 364 aa18.75■□□□□ 0.59
CHTOP-205ENST00000403433 PFKMP08237 780 aa18.75■□□□□ 0.59
CHTOP-205ENST00000403433 PDGFRAP16234 1089 aa18.75■□□□□ 0.59
CHTOP-205ENST00000403433 PSMC4P43686 418 aa18.75■□□□□ 0.59
CHTOP-205ENST00000403433 CENPUQ71F23 418 aa18.75■□□□□ 0.59
CHTOP-205ENST00000403433 YTHDF3Q7Z739 585 aaKnown RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms