RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 FUKQ8N0W3 1084 aa27■■□□□ 1.91
CPNE1-205ENST00000401607 DBF4BQ8NFT6 615 aa27■■□□□ 1.91
CPNE1-205ENST00000401607 HNRNPABQ99729 332 aaKnown RBP27■■□□□ 1.91
CPNE1-205ENST00000401607 I3L4J1 428 aa26.99■■□□□ 1.91
CPNE1-205ENST00000401607 B4GALT3O60512 393 aa26.99■■□□□ 1.91
CPNE1-205ENST00000401607 GLI1P08151 1106 aa26.99■■□□□ 1.91
CPNE1-205ENST00000401607 LHX1P48742 406 aa26.99■■□□□ 1.91
CPNE1-205ENST00000401607 ATN1P54259 1190 aaPredicted RBP26.99■■□□□ 1.91
CPNE1-205ENST00000401607 SIX1Q15475 284 aaPredicted RBP26.99■■□□□ 1.91
CPNE1-205ENST00000401607 PAN2Q504Q3 1202 aaKnown RBP26.99■■□□□ 1.91
CPNE1-205ENST00000401607 BEND6Q5SZJ8 279 aaPredicted RBP26.99■■□□□ 1.91
CPNE1-205ENST00000401607 PLVAPQ9BX97 442 aa26.99■■□□□ 1.91
CPNE1-205ENST00000401607 CRISPLD2Q9H0B8 497 aa26.99■■□□□ 1.91
CPNE1-205ENST00000401607 PLEKHA4Q9H4M7 779 aa26.99■■□□□ 1.91
CPNE1-205ENST00000401607 SLITRK6Q9H5Y7 841 aa26.99■■□□□ 1.91
CPNE1-205ENST00000401607 GOLGA6L10A0A0M3HER8 536 aa26.99■■□□□ 1.91
CPNE1-205ENST00000401607 ERLIN1O75477 346 aa26.99■■□□□ 1.91
CPNE1-205ENST00000401607 HEXIM1O94992 359 aaKnown RBP26.99■■□□□ 1.91
CPNE1-205ENST00000401607 MYBL2P10244 700 aa26.99■■□□□ 1.91
CPNE1-205ENST00000401607 GJC1P36383 396 aa26.99■■□□□ 1.91
CPNE1-205ENST00000401607 BRCC3P46736 316 aa26.99■■□□□ 1.91
CPNE1-205ENST00000401607 RPL34P49207 117 aaKnown RBP26.99■■□□□ 1.91
CPNE1-205ENST00000401607 LRRC38Q5VT99 294 aa26.99■■□□□ 1.91
CPNE1-205ENST00000401607 OLFML1Q6UWY5 402 aa26.99■■□□□ 1.91
CPNE1-205ENST00000401607 CCNI2Q6ZMN8 369 aaPredicted RBP26.99■■□□□ 1.91
CPNE1-205ENST00000401607 PAQR9Q6ZVX9 377 aa26.99■■□□□ 1.91
CPNE1-205ENST00000401607 ARFGAP1Q8N6T3 406 aa26.99■■□□□ 1.91
CPNE1-205ENST00000401607 PRELID2Q8N945 189 aa26.99■■□□□ 1.91
CPNE1-205ENST00000401607 CRTAC1Q9NQ79 661 aa26.99■■□□□ 1.91
CPNE1-205ENST00000401607 PAPSS1O43252 624 aaPredicted RBP26.98■■□□□ 1.91
CPNE1-205ENST00000401607 TCTN1Q2MV58 587 aa26.98■■□□□ 1.91
CPNE1-205ENST00000401607 TRNP1Q6NT89 227 aa26.98■■□□□ 1.91
CPNE1-205ENST00000401607 SLC39A5Q6ZMH5 540 aa26.98■■□□□ 1.91
CPNE1-205ENST00000401607 SYT15Q9BQS2 421 aa26.98■■□□□ 1.91
CPNE1-205ENST00000401607 HERPUD2Q9BSE4 406 aa26.98■■□□□ 1.91
CPNE1-205ENST00000401607 ZSCAN5CA6NGD5 496 aaPredicted RBP26.97■■□□□ 1.91
CPNE1-205ENST00000401607 FSCN2O14926 492 aa26.97■■□□□ 1.91
CPNE1-205ENST00000401607 ODC1P11926 461 aa26.97■■□□□ 1.91
CPNE1-205ENST00000401607 DSC1Q08554 894 aa26.97■■□□□ 1.91
CPNE1-205ENST00000401607 ATP13A4Q4VNC1 1196 aa26.97■■□□□ 1.91
CPNE1-205ENST00000401607 MDH1BQ5I0G3 518 aa26.97■■□□□ 1.91
CPNE1-205ENST00000401607 NOMO2Q5JPE7 1267 aa26.97■■□□□ 1.91
CPNE1-205ENST00000401607 TXNRD3NBQ6F5E7 133 aa26.97■■□□□ 1.91
CPNE1-205ENST00000401607 ANKRD33Q7Z3H0 272 aa26.97■■□□□ 1.91
CPNE1-205ENST00000401607 ZNF280BQ86YH2 543 aa26.97■■□□□ 1.91
CPNE1-205ENST00000401607 EXD1Q8NHP7 514 aa26.97■■□□□ 1.91
CPNE1-205ENST00000401607 HASPINQ8TF76 798 aa26.97■■□□□ 1.91
CPNE1-205ENST00000401607 GDF3Q9NR23 364 aa26.97■■□□□ 1.91
CPNE1-205ENST00000401607 TMEM161AQ9NX61 479 aa26.97■■□□□ 1.91
CPNE1-205ENST00000401607 AMACRQ9UHK6 382 aa26.97■■□□□ 1.91
CPNE1-205ENST00000401607 TANC1Q9C0D5 1861 aa26.97■■□□□ 1.91
CPNE1-205ENST00000401607 C2CD4BA6NLJ0 364 aa26.97■■□□□ 1.91
CPNE1-205ENST00000401607 M0QZQ0 153 aa26.97■■□□□ 1.91
CPNE1-205ENST00000401607 CLDN5O00501 218 aa26.97■■□□□ 1.91
CPNE1-205ENST00000401607 ENPP3O14638 875 aa26.97■■□□□ 1.91
CPNE1-205ENST00000401607 LRCH4O75427 683 aa26.97■■□□□ 1.91
CPNE1-205ENST00000401607 DDHD2O94830 711 aa26.97■■□□□ 1.91
CPNE1-205ENST00000401607 ITGB1P05556 798 aa26.97■■□□□ 1.91
CPNE1-205ENST00000401607 LLGL1Q15334 1064 aa26.97■■□□□ 1.91
CPNE1-205ENST00000401607 GSPT2Q8IYD1 628 aaKnown RBP26.97■■□□□ 1.91
CPNE1-205ENST00000401607 RTP3Q9BQQ7 232 aa26.97■■□□□ 1.91
CPNE1-205ENST00000401607 F8W810 466 aa26.96■■□□□ 1.91
CPNE1-205ENST00000401607 PHF2O75151 1096 aa26.96■■□□□ 1.91
CPNE1-205ENST00000401607 CYP11A1P05108 521 aa26.96■■□□□ 1.91
CPNE1-205ENST00000401607 RARAP10276 462 aa26.96■■□□□ 1.91
CPNE1-205ENST00000401607 PAX3P23760 479 aa26.96■■□□□ 1.91
CPNE1-205ENST00000401607 TNFRSF8P28908 595 aa26.96■■□□□ 1.91
CPNE1-205ENST00000401607 PLA2G4AP47712 749 aa26.96■■□□□ 1.91
CPNE1-205ENST00000401607 SLC6A3Q01959 620 aa26.96■■□□□ 1.91
CPNE1-205ENST00000401607 PPP2R5EQ16537 467 aa26.96■■□□□ 1.91
CPNE1-205ENST00000401607 DCLRE1AQ6PJP8 1040 aa26.96■■□□□ 1.91
CPNE1-205ENST00000401607 ANKS1BQ7Z6G8 1248 aa26.96■■□□□ 1.91
CPNE1-205ENST00000401607 RSPH1Q8WYR4 309 aa26.96■■□□□ 1.91
CPNE1-205ENST00000401607 SEPT8Q92599 483 aa26.96■■□□□ 1.91
CPNE1-205ENST00000401607 KHSRPQ92945 711 aaKnown RBP eCLIP26.96■■□□□ 1.918e-8■■■□□ 15.7
CPNE1-205ENST00000401607 DUSP16Q9BY84 665 aa26.96■■□□□ 1.91
CPNE1-205ENST00000401607 B3GNT5Q9BYG0 378 aa26.96■■□□□ 1.91
CPNE1-205ENST00000401607 ELAC1Q9H777 363 aaKnown RBP26.96■■□□□ 1.91
CPNE1-205ENST00000401607 CYLDQ9NQC7 956 aa26.96■■□□□ 1.91
CPNE1-205ENST00000401607 KLHL11Q9NVR0 708 aa26.96■■□□□ 1.91
CPNE1-205ENST00000401607 BHMG1C9JSJ3 638 aaPredicted RBP26.95■■□□□ 1.9
CPNE1-205ENST00000401607 XPO1O14980 1071 aaKnown RBP26.95■■□□□ 1.9
CPNE1-205ENST00000401607 COL6A1P12109 1028 aa26.95■■□□□ 1.9
CPNE1-205ENST00000401607 GPD1P21695 349 aa26.95■■□□□ 1.9
CPNE1-205ENST00000401607 FLT3P36888 993 aa26.95■■□□□ 1.9
CPNE1-205ENST00000401607 GUCY2DQ02846 1103 aa26.95■■□□□ 1.9
CPNE1-205ENST00000401607 SLC25A11Q02978 314 aaKnown RBP26.95■■□□□ 1.9
CPNE1-205ENST00000401607 TAF5Q15542 800 aa26.95■■□□□ 1.9
CPNE1-205ENST00000401607 CYP1B1Q16678 543 aa26.95■■□□□ 1.9
CPNE1-205ENST00000401607 ZDHHC17Q8IUH5 632 aa26.95■■□□□ 1.9
CPNE1-205ENST00000401607 SCUBE3Q8IX30 993 aa26.95■■□□□ 1.9
CPNE1-205ENST00000401607 SPATA18Q8TC71 538 aa26.95■■□□□ 1.9
CPNE1-205ENST00000401607 URGCPQ8TCY9 931 aa26.95■■□□□ 1.9
CPNE1-205ENST00000401607 EPB41L5Q9HCM4 733 aa26.95■■□□□ 1.9
CPNE1-205ENST00000401607 TBC1D13Q9NVG8 400 aa26.95■■□□□ 1.9
CPNE1-205ENST00000401607 CDH9Q9ULB4 789 aa26.95■■□□□ 1.9
CPNE1-205ENST00000401607 MYBPHLA2RUH7 354 aa26.94■■□□□ 1.9
CPNE1-205ENST00000401607 GRAP2O75791 330 aa26.94■■□□□ 1.9
CPNE1-205ENST00000401607 ZNF143P52747 638 aaPredicted RBP26.94■■□□□ 1.9
CPNE1-205ENST00000401607 SNX16P57768 344 aa26.94■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms