RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 ATP2C2O75185 946 aa12.79□□□□□ -0.36
LINC00544-201ENST00000400540 KCNK5O95279 499 aa12.79□□□□□ -0.36
LINC00544-201ENST00000400540 BMP15O95972 392 aa12.79□□□□□ -0.36
LINC00544-201ENST00000400540 USP17L7P0C7H9 530 aa12.79□□□□□ -0.36
LINC00544-201ENST00000400540 SEC13P55735 322 aa12.79□□□□□ -0.36
LINC00544-201ENST00000400540 PSMC1P62191 440 aaKnown RBP12.79□□□□□ -0.36
LINC00544-201ENST00000400540 RPL10AP62906 217 aaKnown RBP12.79□□□□□ -0.36
LINC00544-201ENST00000400540 ZXDBP98169 803 aa12.79□□□□□ -0.36
LINC00544-201ENST00000400540 AMPD2Q01433 879 aa12.79□□□□□ -0.36
LINC00544-201ENST00000400540 CREB5Q02930 508 aa12.79□□□□□ -0.36
LINC00544-201ENST00000400540 POSTNQ15063 836 aa12.79□□□□□ -0.36
LINC00544-201ENST00000400540 SYT13Q7L8C5 426 aa12.79□□□□□ -0.36
LINC00544-201ENST00000400540 BRAPQ7Z569 592 aa12.79□□□□□ -0.36
LINC00544-201ENST00000400540 SPATA2LQ8IUW3 424 aaPredicted RBP12.79□□□□□ -0.36
LINC00544-201ENST00000400540 ADGRF2Q8IZF7 708 aa12.79□□□□□ -0.36
LINC00544-201ENST00000400540 TMEM86AQ8N2M4 240 aa12.79□□□□□ -0.36
LINC00544-201ENST00000400540 CSGALNACT2Q8N6G5 542 aa12.79□□□□□ -0.36
LINC00544-201ENST00000400540 LRRC52Q8N7C0 313 aa12.79□□□□□ -0.36
LINC00544-201ENST00000400540 SH3RF2Q8TEC5 729 aa12.79□□□□□ -0.36
LINC00544-201ENST00000400540 ATP2A3Q93084 1043 aa12.79□□□□□ -0.36
LINC00544-201ENST00000400540 CLIC6Q96NY7 704 aa12.79□□□□□ -0.36
LINC00544-201ENST00000400540 ACCSQ96QU6 501 aa12.79□□□□□ -0.36
LINC00544-201ENST00000400540 TPSD1Q9BZJ3 242 aa12.79□□□□□ -0.36
LINC00544-201ENST00000400540 LINC00597Q9H2U6 94 aa12.79□□□□□ -0.36
LINC00544-201ENST00000400540 TMEM206Q9H813 350 aa12.79□□□□□ -0.36
LINC00544-201ENST00000400540 PDE11AQ9HCR9 933 aa12.79□□□□□ -0.36
LINC00544-201ENST00000400540 ABCB6Q9NP58 842 aa12.79□□□□□ -0.36
LINC00544-201ENST00000400540 VPS45Q9NRW7 570 aa12.79□□□□□ -0.36
LINC00544-201ENST00000400540 GCNT4Q9P109 453 aa12.79□□□□□ -0.36
LINC00544-201ENST00000400540 UXTQ9UBK9 157 aaPredicted RBP12.79□□□□□ -0.36
LINC00544-201ENST00000400540 FBXO2Q9UK22 296 aaPredicted RBP12.79□□□□□ -0.36
LINC00544-201ENST00000400540 RALYQ9UKM9 306 aaKnown RBP12.79□□□□□ -0.36
LINC00544-201ENST00000400540 ITGA11Q9UKX5 1188 aa12.79□□□□□ -0.36
LINC00544-201ENST00000400540 VPS37CA5D8V6 355 aaPredicted RBP12.78□□□□□ -0.36
LINC00544-201ENST00000400540 GABRDO14764 452 aa12.78□□□□□ -0.36
LINC00544-201ENST00000400540 APBB3O95704 486 aa12.78□□□□□ -0.36
LINC00544-201ENST00000400540 DGKEP52429 567 aa12.78□□□□□ -0.36
LINC00544-201ENST00000400540 SOWAHAQ2M3V2 549 aa12.78□□□□□ -0.36
LINC00544-201ENST00000400540 CFAP221Q4G0U5 840 aa12.78□□□□□ -0.36
LINC00544-201ENST00000400540 FBXO43Q4G163 708 aa12.78□□□□□ -0.36
LINC00544-201ENST00000400540 RNF43Q68DV7 783 aa12.78□□□□□ -0.36
LINC00544-201ENST00000400540 PSAPL1Q6NUJ1 521 aa12.78□□□□□ -0.36
LINC00544-201ENST00000400540 FAM173BQ6P4H8 233 aa12.78□□□□□ -0.36
LINC00544-201ENST00000400540 TOP6BLQ8N6T0 577 aa12.78□□□□□ -0.36
LINC00544-201ENST00000400540 KBTBD7Q8WVZ9 684 aa12.78□□□□□ -0.36
LINC00544-201ENST00000400540 MYLPFQ96A32 169 aa12.78□□□□□ -0.36
LINC00544-201ENST00000400540 EDEM2Q9BV94 578 aa12.78□□□□□ -0.36
LINC00544-201ENST00000400540 LSM14BQ9BX40 385 aaKnown RBP12.78□□□□□ -0.36
LINC00544-201ENST00000400540 GDAP2Q9NXN4 497 aa12.78□□□□□ -0.36
LINC00544-201ENST00000400540 SEL1LQ9UBV2 794 aa12.78□□□□□ -0.36
LINC00544-201ENST00000400540 STK17AQ9UEE5 414 aa12.78□□□□□ -0.36
LINC00544-201ENST00000400540 EXOC7Q9UPT5 735 aa12.78□□□□□ -0.36
LINC00544-201ENST00000400540 A0A087X0B3 334 aa12.77□□□□□ -0.37
LINC00544-201ENST00000400540 SCAMP3O14828 347 aaKnown RBP12.77□□□□□ -0.37
LINC00544-201ENST00000400540 GIPC1O14908 333 aa12.77□□□□□ -0.37
LINC00544-201ENST00000400540 PRPF6O94906 941 aaKnown RBP12.77□□□□□ -0.37
LINC00544-201ENST00000400540 TMEM191BP0C7N4 346 aa12.77□□□□□ -0.37
LINC00544-201ENST00000400540 IDEP14735 1019 aa12.77□□□□□ -0.37
LINC00544-201ENST00000400540 GAP43P17677 238 aa12.77□□□□□ -0.37
LINC00544-201ENST00000400540 BCKDHBP21953 392 aa12.77□□□□□ -0.37
LINC00544-201ENST00000400540 GARTP22102 1010 aa12.77□□□□□ -0.37
LINC00544-201ENST00000400540 LMO2P25791 158 aa12.77□□□□□ -0.37
LINC00544-201ENST00000400540 GBP1P32455 592 aa12.77□□□□□ -0.37
LINC00544-201ENST00000400540 OPRD1P41143 372 aa12.77□□□□□ -0.37
LINC00544-201ENST00000400540 USP46P62068 366 aa12.77□□□□□ -0.37
LINC00544-201ENST00000400540 KCNB1Q14721 858 aa12.77□□□□□ -0.37
LINC00544-201ENST00000400540 ELF2Q15723 593 aa12.77□□□□□ -0.37
LINC00544-201ENST00000400540 GAB4Q2WGN9 574 aa12.77□□□□□ -0.37
LINC00544-201ENST00000400540 C2orf27AQ580R0 203 aa12.77□□□□□ -0.37
LINC00544-201ENST00000400540 RRAGBQ5VZM2 374 aa12.77□□□□□ -0.37
LINC00544-201ENST00000400540 FAM171BQ6P995 826 aa12.77□□□□□ -0.37
LINC00544-201ENST00000400540 SFTPA1Q8IWL2 248 aa12.77□□□□□ -0.37
LINC00544-201ENST00000400540 SYCP3Q8IZU3 236 aa12.77□□□□□ -0.37
LINC00544-201ENST00000400540 GLIS3Q8NEA6 775 aa12.77□□□□□ -0.37
LINC00544-201ENST00000400540 OR5B17Q8NGF7 314 aa12.77□□□□□ -0.37
LINC00544-201ENST00000400540 CACTINQ8WUQ7 758 aaKnown RBP12.77□□□□□ -0.37
LINC00544-201ENST00000400540 ACDQ96AP0 544 aa12.77□□□□□ -0.37
LINC00544-201ENST00000400540 SYT15Q9BQS2 421 aa12.77□□□□□ -0.37
LINC00544-201ENST00000400540 CRTAC1Q9NQ79 661 aa12.77□□□□□ -0.37
LINC00544-201ENST00000400540 OLFML3Q9NRN5 406 aa12.77□□□□□ -0.37
LINC00544-201ENST00000400540 CCDC39Q9UFE4 941 aa12.77□□□□□ -0.37
LINC00544-201ENST00000400540 EBF1Q9UH73 591 aa12.77□□□□□ -0.37
LINC00544-201ENST00000400540 MYO18AQ92614 2054 aaKnown RBP12.77□□□□□ -0.37
LINC00544-201ENST00000400540 PI4KAP42356 2102 aa12.76□□□□□ -0.37
LINC00544-201ENST00000400540 LNP1A1A4G5 178 aa12.76□□□□□ -0.37
LINC00544-201ENST00000400540 FRMD3A2A2Y4 597 aa12.76□□□□□ -0.37
LINC00544-201ENST00000400540 BCLAF3A2AJT9 711 aaKnown RBP12.76□□□□□ -0.37
LINC00544-201ENST00000400540 C4orf47A7E2U8 309 aa12.76□□□□□ -0.37
LINC00544-201ENST00000400540 PATE3B3GLJ2 98 aa12.76□□□□□ -0.37
LINC00544-201ENST00000400540 K7EQS6 105 aa12.76□□□□□ -0.37
LINC00544-201ENST00000400540 RHOBTB1O94844 696 aa12.76□□□□□ -0.37
LINC00544-201ENST00000400540 CAVIN2O95810 425 aa12.76□□□□□ -0.37
LINC00544-201ENST00000400540 LDHAP00338 332 aaKnown RBP12.76□□□□□ -0.37
LINC00544-201ENST00000400540 HNRNPLP14866 589 aaKnown RBP eCLIP12.76□□□□□ -0.37
LINC00544-201ENST00000400540 HDCP19113 662 aa12.76□□□□□ -0.37
LINC00544-201ENST00000400540 BDNFP23560 247 aa12.76□□□□□ -0.37
LINC00544-201ENST00000400540 PCSK1P29120 753 aa12.76□□□□□ -0.37
LINC00544-201ENST00000400540 LHX1P48742 406 aa12.76□□□□□ -0.37
LINC00544-201ENST00000400540 RBP5P82980 135 aa12.76□□□□□ -0.37
LINC00544-201ENST00000400540 SHC2P98077 582 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms