RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 CD274Q9NZQ7 290 aa18.91■□□□□ 0.62
COL18A1-204ENST00000400337 MTO1Q9Y2Z2 717 aaKnown RBP18.91■□□□□ 0.62
COL18A1-204ENST00000400337 SLC26A2P50443 739 aa18.91■□□□□ 0.62
COL18A1-204ENST00000400337 ARHGEF7Q14155 803 aa18.91■□□□□ 0.62
COL18A1-204ENST00000400337 LY6KQ17RY6 165 aa18.91■□□□□ 0.62
COL18A1-204ENST00000400337 TDRD10Q5VZ19 366 aaKnown RBP18.91■□□□□ 0.62
COL18A1-204ENST00000400337 FBXW10Q5XX13 1052 aa18.91■□□□□ 0.62
COL18A1-204ENST00000400337 ACTRT1Q8TDG2 376 aa18.91■□□□□ 0.62
COL18A1-204ENST00000400337 KCNQ5Q9NR82 932 aa18.91■□□□□ 0.62
COL18A1-204ENST00000400337 GTPBP10A4D1E9 387 aaKnown RBP18.91■□□□□ 0.62
COL18A1-204ENST00000400337 CXCL8P10145 99 aa18.91■□□□□ 0.62
COL18A1-204ENST00000400337 EPHX2P34913 555 aa18.91■□□□□ 0.62
COL18A1-204ENST00000400337 MYBPC2Q14324 1141 aa18.91■□□□□ 0.62
COL18A1-204ENST00000400337 PAN2Q504Q3 1202 aaKnown RBP18.91■□□□□ 0.62
COL18A1-204ENST00000400337 OTOP1Q7RTM1 612 aa18.91■□□□□ 0.62
COL18A1-204ENST00000400337 EMC1Q8N766 993 aa18.91■□□□□ 0.62
COL18A1-204ENST00000400337 TATDN2Q93075 761 aa18.91■□□□□ 0.62
COL18A1-204ENST00000400337 GPR63Q9BZJ6 419 aa18.91■□□□□ 0.62
COL18A1-204ENST00000400337 VPS33BQ9H267 617 aa18.91■□□□□ 0.62
COL18A1-204ENST00000400337 COL5A2P05997 1499 aaPredicted RBP18.91■□□□□ 0.62
COL18A1-204ENST00000400337 VWA5AO00534 786 aa18.91■□□□□ 0.62
COL18A1-204ENST00000400337 CYTH3O43739 400 aa18.91■□□□□ 0.62
COL18A1-204ENST00000400337 FAM107AO95990 144 aa18.91■□□□□ 0.62
COL18A1-204ENST00000400337 PYGLP06737 847 aa18.91■□□□□ 0.62
COL18A1-204ENST00000400337 FDFT1P37268 417 aa18.91■□□□□ 0.62
COL18A1-204ENST00000400337 ADGRF2Q8IZF7 708 aa18.91■□□□□ 0.62
COL18A1-204ENST00000400337 KIF2BQ8N4N8 673 aa18.91■□□□□ 0.62
COL18A1-204ENST00000400337 VGLL2Q8N8G2 317 aa18.91■□□□□ 0.62
COL18A1-204ENST00000400337 DNERQ8NFT8 737 aa18.91■□□□□ 0.62
COL18A1-204ENST00000400337 IL17RAQ96F46 866 aa18.91■□□□□ 0.62
COL18A1-204ENST00000400337 THTPAQ9BU02 230 aa18.91■□□□□ 0.62
COL18A1-204ENST00000400337 WNT10BO00744 389 aa18.91■□□□□ 0.62
COL18A1-204ENST00000400337 AIM2O14862 343 aa18.91■□□□□ 0.62
COL18A1-204ENST00000400337 MTFR1LQ9H019 292 aa18.91■□□□□ 0.62
COL18A1-204ENST00000400337 RPS6KL1Q9Y6S9 549 aa18.91■□□□□ 0.62
COL18A1-204ENST00000400337 TMEM131LA2VDJ0 1609 aa18.91■□□□□ 0.62
COL18A1-204ENST00000400337 WTIPA6NIX2 430 aaPredicted RBP18.9■□□□□ 0.62
COL18A1-204ENST00000400337 PROSCO94903 275 aa18.9■□□□□ 0.62
COL18A1-204ENST00000400337 MEI1Q5TIA1 1274 aa18.9■□□□□ 0.62
COL18A1-204ENST00000400337 ZFPM1Q8IX07 1006 aa18.9■□□□□ 0.62
COL18A1-204ENST00000400337 FBXO36Q8NEA4 188 aa18.9■□□□□ 0.62
COL18A1-204ENST00000400337 FUT8Q9BYC5 575 aa18.9■□□□□ 0.62
COL18A1-204ENST00000400337 ZNF286BP0CG31 522 aa18.9■□□□□ 0.62
COL18A1-204ENST00000400337 PTK6Q13882 451 aa18.9■□□□□ 0.62
COL18A1-204ENST00000400337 GTF2H3Q13889 308 aa18.9■□□□□ 0.62
COL18A1-204ENST00000400337 LRRC6Q86X45 466 aa18.9■□□□□ 0.62
COL18A1-204ENST00000400337 BHMTQ93088 406 aa18.9■□□□□ 0.62
COL18A1-204ENST00000400337 OPTNQ96CV9 577 aa18.9■□□□□ 0.62
COL18A1-204ENST00000400337 RPRD1AQ96P16 312 aaPredicted RBP18.9■□□□□ 0.62
COL18A1-204ENST00000400337 DMGDHQ9UI17 866 aaKnown RBP18.9■□□□□ 0.62
COL18A1-204ENST00000400337 CDYLQ9Y232 598 aa18.9■□□□□ 0.62
COL18A1-204ENST00000400337 ANXA9O76027 345 aa18.9■□□□□ 0.62
COL18A1-204ENST00000400337 TGM2P21980 687 aa18.9■□□□□ 0.62
COL18A1-204ENST00000400337 LRRC36Q1X8D7 754 aa18.9■□□□□ 0.62
COL18A1-204ENST00000400337 TMEM119Q4V9L6 283 aa18.9■□□□□ 0.62
COL18A1-204ENST00000400337 ZRANB3Q5FWF4 1079 aa18.9■□□□□ 0.62
COL18A1-204ENST00000400337 NT5DC1Q5TFE4 455 aa18.9■□□□□ 0.62
COL18A1-204ENST00000400337 LINC00523Q86TU6 105 aa18.9■□□□□ 0.62
COL18A1-204ENST00000400337 IFNEQ86WN2 208 aa18.9■□□□□ 0.62
COL18A1-204ENST00000400337 MIB1Q86YT6 1006 aa18.9■□□□□ 0.62
COL18A1-204ENST00000400337 ARHGAP18Q8N392 663 aa18.9■□□□□ 0.62
COL18A1-204ENST00000400337 MROH2AA6NES4 1674 aa18.9■□□□□ 0.62
COL18A1-204ENST00000400337 A0A0A6YYK5 440 aaPredicted RBP18.9■□□□□ 0.62
COL18A1-204ENST00000400337 TMEM150BA6NC51 233 aa18.9■□□□□ 0.62
COL18A1-204ENST00000400337 KLHL2O95198 593 aa18.9■□□□□ 0.62
COL18A1-204ENST00000400337 ALDH7A1P49419 539 aaKnown RBP18.9■□□□□ 0.62
COL18A1-204ENST00000400337 MMP14P50281 582 aa18.9■□□□□ 0.62
COL18A1-204ENST00000400337 SGF29Q96ES7 293 aa18.9■□□□□ 0.62
COL18A1-204ENST00000400337 TMEM176AQ96HP8 235 aa18.9■□□□□ 0.62
COL18A1-204ENST00000400337 FOPNLQ96NB1 174 aa18.9■□□□□ 0.62
COL18A1-204ENST00000400337 FAM111AQ96PZ2 611 aa18.9■□□□□ 0.62
COL18A1-204ENST00000400337 MTIF3Q9H2K0 278 aaKnown RBP18.9■□□□□ 0.62
COL18A1-204ENST00000400337 STX18Q9P2W9 335 aaKnown RBP18.9■□□□□ 0.62
COL18A1-204ENST00000400337 KIF20BQ96Q89 1820 aa18.9■□□□□ 0.62
COL18A1-204ENST00000400337 B2RBV5 119 aa18.89■□□□□ 0.62
COL18A1-204ENST00000400337 H3BRB1 525 aa18.89■□□□□ 0.62
COL18A1-204ENST00000400337 CHRM3P20309 590 aa18.89■□□□□ 0.62
COL18A1-204ENST00000400337 ATICP31939 592 aa18.89■□□□□ 0.62
COL18A1-204ENST00000400337 BCAT1P54687 386 aa18.89■□□□□ 0.62
COL18A1-204ENST00000400337 PDK2Q15119 407 aa18.89■□□□□ 0.62
COL18A1-204ENST00000400337 CLEC16AQ2KHT3 1053 aa18.89■□□□□ 0.62
COL18A1-204ENST00000400337 KIRREL3Q8IZU9 778 aa18.89■□□□□ 0.62
COL18A1-204ENST00000400337 ATP6V0D2Q8N8Y2 350 aa18.89■□□□□ 0.62
COL18A1-204ENST00000400337 FBXO25Q8TCJ0 367 aa18.89■□□□□ 0.62
COL18A1-204ENST00000400337 OSMRQ99650 979 aa18.89■□□□□ 0.62
COL18A1-204ENST00000400337 TUT1Q9H6E5 874 aaKnown RBP18.89■□□□□ 0.62
COL18A1-204ENST00000400337 TRAF3IP3Q9Y228 551 aa18.89■□□□□ 0.62
COL18A1-204ENST00000400337 ATXN3P54252 364 aaPredicted RBP18.89■□□□□ 0.61
COL18A1-204ENST00000400337 PTPN11Q06124 597 aaPredicted RBP18.89■□□□□ 0.61
COL18A1-204ENST00000400337 DACT2Q5SW24 774 aa18.89■□□□□ 0.61
COL18A1-204ENST00000400337 FAM131BQ86XD5 332 aa18.89■□□□□ 0.61
COL18A1-204ENST00000400337 TMEM121Q9BTD3 319 aa18.89■□□□□ 0.61
COL18A1-204ENST00000400337 IDI2Q9BXS1 227 aa18.89■□□□□ 0.61
COL18A1-204ENST00000400337 RAB42Q8N4Z0 105 aa18.89■□□□□ 0.61
COL18A1-204ENST00000400337 ELMO3Q96BJ8 720 aa18.89■□□□□ 0.61
COL18A1-204ENST00000400337 FAM163AQ96GL9 167 aaPredicted RBP18.89■□□□□ 0.61
COL18A1-204ENST00000400337 FRMD8P1Q9BZ68 369 aaPredicted RBP18.89■□□□□ 0.61
COL18A1-204ENST00000400337 SCHIP1Q9P0W5 487 aaPredicted RBP18.89■□□□□ 0.61
COL18A1-204ENST00000400337 USP18Q9UMW8 372 aa18.89■□□□□ 0.61
COL18A1-204ENST00000400337 LOC100653049A0A140TA62 436 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms