RNA–Protein interactions for RNA: ENST00000400183.6

USP25-204, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best) BASIC

Gene USP25, Length 5,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-204ENST00000400183 CDH18Q13634 790 aa19.22■□□□□ 0.67
USP25-204ENST00000400183 MRNIPQ6NTE8 343 aa19.22■□□□□ 0.67
USP25-204ENST00000400183 FUT8Q9BYC5 575 aa19.22■□□□□ 0.67
USP25-204ENST00000400183 RPS6KL1Q9Y6S9 549 aa19.22■□□□□ 0.67
USP25-204ENST00000400183 ZC3H11AO75152 810 aaKnown RBP eCLIP19.22■□□□□ 0.67
USP25-204ENST00000400183 VDRP11473 427 aa19.22■□□□□ 0.67
USP25-204ENST00000400183 NAMPTP43490 491 aa19.22■□□□□ 0.67
USP25-204ENST00000400183 BTNL9Q6UXG8 535 aa19.22■□□□□ 0.67
USP25-204ENST00000400183 ACSF2Q96CM8 615 aaPredicted RBP19.22■□□□□ 0.67
USP25-204ENST00000400183 ASCC2Q9H1I8 757 aaPredicted RBP19.22■□□□□ 0.67
USP25-204ENST00000400183 PABPC3Q9H361 631 aaKnown RBP19.22■□□□□ 0.67
USP25-204ENST00000400183 CDC42BPBQ9Y5S2 1711 aa19.22■□□□□ 0.67
USP25-204ENST00000400183 SPATA31A6Q5VVP1 1343 aa19.22■□□□□ 0.67
USP25-204ENST00000400183 HNRNPCP07910 306 aaKnown RBP eCLIP19.21■□□□□ 0.67
USP25-204ENST00000400183 DAB2IPQ5VWQ8 1189 aa19.21■□□□□ 0.67
USP25-204ENST00000400183 HORMAD1Q86X24 394 aa19.21■□□□□ 0.67
USP25-204ENST00000400183 CBWD2Q8IUF1 395 aa19.21■□□□□ 0.67
USP25-204ENST00000400183 RPRD1AQ96P16 312 aaPredicted RBP19.21■□□□□ 0.67
USP25-204ENST00000400183 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.21■□□□□ 0.67
USP25-204ENST00000400183 F9P00740 461 aa19.21■□□□□ 0.67
USP25-204ENST00000400183 HSD17B3P37058 310 aa19.21■□□□□ 0.67
USP25-204ENST00000400183 ZNF177Q13360 481 aaPredicted RBP19.21■□□□□ 0.67
USP25-204ENST00000400183 HIST2H2ACQ16777 129 aaPredicted RBP19.21■□□□□ 0.67
USP25-204ENST00000400183 ZNF484Q5JVG2 852 aa19.21■□□□□ 0.67
USP25-204ENST00000400183 DEPDC1Q5TB30 811 aa19.21■□□□□ 0.67
USP25-204ENST00000400183 HIST2H2AA3Q6FI13 130 aa19.21■□□□□ 0.67
USP25-204ENST00000400183 RNF180Q86T96 592 aa19.21■□□□□ 0.67
USP25-204ENST00000400183 DNAJC9Q8WXX5 260 aa19.21■□□□□ 0.67
USP25-204ENST00000400183 COLEC11Q9BWP8 271 aa19.21■□□□□ 0.67
USP25-204ENST00000400183 CD248Q9HCU0 757 aa19.21■□□□□ 0.67
USP25-204ENST00000400183 SCAF8Q9UPN6 1271 aaKnown RBP19.21■□□□□ 0.67
USP25-204ENST00000400183 GOLGA8TH3BQL2 631 aa19.21■□□□□ 0.67
USP25-204ENST00000400183 AP1G2O75843 785 aa19.21■□□□□ 0.67
USP25-204ENST00000400183 PGK2P07205 417 aa19.21■□□□□ 0.67
USP25-204ENST00000400183 RUNX1T1Q06455 604 aa19.21■□□□□ 0.67
USP25-204ENST00000400183 AGAP9Q5VTM2 703 aa19.21■□□□□ 0.67
USP25-204ENST00000400183 SDE2Q6IQ49 451 aa19.21■□□□□ 0.67
USP25-204ENST00000400183 GALNT4Q8N4A0 578 aa19.21■□□□□ 0.67
USP25-204ENST00000400183 SRPK1Q96SB4 655 aaKnown RBP19.21■□□□□ 0.67
USP25-204ENST00000400183 DNAJC7Q99615 494 aa19.21■□□□□ 0.67
USP25-204ENST00000400183 ILKAPQ9H0C8 392 aaPredicted RBP19.21■□□□□ 0.67
USP25-204ENST00000400183 TRMT6Q9UJA5 497 aaKnown RBP19.21■□□□□ 0.67
USP25-204ENST00000400183 DGKIO75912 1065 aa19.21■□□□□ 0.67
USP25-204ENST00000400183 KCNA3P22001 575 aa19.21■□□□□ 0.67
USP25-204ENST00000400183 SOX11P35716 441 aa19.21■□□□□ 0.67
USP25-204ENST00000400183 CAP2P40123 477 aa19.21■□□□□ 0.67
USP25-204ENST00000400183 STX5Q13190 355 aa19.21■□□□□ 0.67
USP25-204ENST00000400183 ARHGAP15Q53QZ3 475 aa19.21■□□□□ 0.67
USP25-204ENST00000400183 DENND1BQ6P3S1 775 aa19.21■□□□□ 0.67
USP25-204ENST00000400183 SGF29Q96ES7 293 aa19.21■□□□□ 0.67
USP25-204ENST00000400183 SYNDIG1Q9H7V2 258 aa19.21■□□□□ 0.67
USP25-204ENST00000400183 MED24O75448 989 aa19.21■□□□□ 0.66
USP25-204ENST00000400183 PLEKP08567 350 aaPredicted RBP19.21■□□□□ 0.66
USP25-204ENST00000400183 GARTP22102 1010 aa19.21■□□□□ 0.66
USP25-204ENST00000400183 DNAJC3Q13217 504 aa19.21■□□□□ 0.66
USP25-204ENST00000400183 PTGISQ16647 500 aa19.21■□□□□ 0.66
USP25-204ENST00000400183 LAYNQ6UX15 382 aa19.21■□□□□ 0.66
USP25-204ENST00000400183 KIF2BQ8N4N8 673 aa19.21■□□□□ 0.66
USP25-204ENST00000400183 IL1RL2Q9HB29 575 aa19.21■□□□□ 0.66
USP25-204ENST00000400183 SGPL1O95470 568 aa19.2■□□□□ 0.66
USP25-204ENST00000400183 PDK2Q15119 407 aa19.2■□□□□ 0.66
USP25-204ENST00000400183 PTPAQ15257 358 aa19.2■□□□□ 0.66
USP25-204ENST00000400183 KBTBD12Q3ZCT8 623 aa19.2■□□□□ 0.66
USP25-204ENST00000400183 GLRA4Q5JXX5 417 aa19.2■□□□□ 0.66
USP25-204ENST00000400183 FAXCQ5TGI0 409 aa19.2■□□□□ 0.66
USP25-204ENST00000400183 P3H2Q8IVL5 708 aa19.2■□□□□ 0.66
USP25-204ENST00000400183 SCN3BQ9NY72 215 aa19.2■□□□□ 0.66
USP25-204ENST00000400183 WWOXQ9NZC7 414 aa19.2■□□□□ 0.66
USP25-204ENST00000400183 KLK14Q9P0G3 267 aa19.2■□□□□ 0.66
USP25-204ENST00000400183 ZNF711Q9Y462 761 aa19.2■□□□□ 0.66
USP25-204ENST00000400183 C2orf81A6NN90 581 aa19.2■□□□□ 0.66
USP25-204ENST00000400183 GLRA3O75311 464 aa19.2■□□□□ 0.66
USP25-204ENST00000400183 B3GAT3O94766 335 aa19.2■□□□□ 0.66
USP25-204ENST00000400183 ALDH7A1P49419 539 aaKnown RBP19.2■□□□□ 0.66
USP25-204ENST00000400183 R3HDM1Q15032 1099 aaKnown RBP19.2■□□□□ 0.66
USP25-204ENST00000400183 RSPH10B2B2RC85 870 aa19.2■□□□□ 0.66
USP25-204ENST00000400183 VWA5AO00534 786 aa19.2■□□□□ 0.66
USP25-204ENST00000400183 RSPH10BP0C881 870 aa19.2■□□□□ 0.66
USP25-204ENST00000400183 COPAP53621 1224 aa19.2■□□□□ 0.66
USP25-204ENST00000400183 WLSQ5T9L3 541 aa19.2■□□□□ 0.66
USP25-204ENST00000400183 MPZL3Q6UWV2 235 aa19.2■□□□□ 0.66
USP25-204ENST00000400183 PNKPQ96T60 521 aa19.2■□□□□ 0.66
USP25-204ENST00000400183 AAR2Q9Y312 384 aaKnown RBP19.2■□□□□ 0.66
USP25-204ENST00000400183 DPEP1P16444 411 aa19.2■□□□□ 0.66
USP25-204ENST00000400183 SOAT1P35610 550 aa19.2■□□□□ 0.66
USP25-204ENST00000400183 RGS2P41220 211 aa19.2■□□□□ 0.66
USP25-204ENST00000400183 SEZ6Q53EL9 994 aa19.2■□□□□ 0.66
USP25-204ENST00000400183 SAMD3Q8N6K7 520 aa19.2■□□□□ 0.66
USP25-204ENST00000400183 ZNF518BQ9C0D4 1074 aa19.2■□□□□ 0.66
USP25-204ENST00000400183 MTMR12Q9C0I1 747 aa19.2■□□□□ 0.66
USP25-204ENST00000400183 GPRC5CQ9NQ84 441 aa19.2■□□□□ 0.66
USP25-204ENST00000400183 SPASTQ9UBP0 616 aa19.2■□□□□ 0.66
USP25-204ENST00000400183 TFR2Q9UP52 801 aa19.2■□□□□ 0.66
USP25-204ENST00000400183 SREBF1P36956 1147 aa19.19■□□□□ 0.66
USP25-204ENST00000400183 TMEM169Q96HH4 297 aa19.19■□□□□ 0.66
USP25-204ENST00000400183 FAM111AQ96PZ2 611 aa19.19■□□□□ 0.66
USP25-204ENST00000400183 IL25Q9H293 177 aa19.19■□□□□ 0.66
USP25-204ENST00000400183 ATP11BQ9Y2G3 1177 aa19.19■□□□□ 0.66
USP25-204ENST00000400183 QRICH2Q9H0J4 1663 aa19.19■□□□□ 0.66
USP25-204ENST00000400183 LRG1P02750 347 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms