RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 C19orf12Q9NSK7 152 aa8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 AFF4Q9UHB7 1163 aaKnown RBP8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 MRPL11Q9Y3B7 192 aaKnown RBP8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 AKT1P31749 480 aa8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 STAT4Q14765 748 aa8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 LIN37Q96GY3 246 aaPredicted RBP8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 AK8Q96MA6 479 aa8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 GPCPD1Q9NPB8 672 aa8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 TBC1D22BQ9NU19 505 aa8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 MAP3K5Q99683 1374 aa8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 INPP4BO15327 924 aa8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 ZNF235Q14590 738 aa8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 RRS1Q15050 365 aaKnown RBP8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 ZNF574Q6ZN55 896 aaPredicted RBP8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 GRAMD1CQ8IYS0 662 aa8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 DAW1Q8N136 415 aa8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 COMMD8Q9NX08 183 aa8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 SERTAD1Q9UHV2 236 aa8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 TDP2O95551 362 aa8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 ALDH1A1P00352 501 aa8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 MNDAP41218 407 aa8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 ELK3P41970 407 aa8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 TDGQ13569 410 aa8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 ZC2HC1CQ53FD0 456 aaPredicted RBP8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 DEF8Q6ZN54 512 aa8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 ZBTB10Q96DT7 871 aa8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 TTLL9Q3SXZ7 439 aa8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 SPATA21Q7Z572 469 aa8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 GNG13Q9P2W3 67 aa8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 VPS51Q9UID3 782 aa8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 TRIM64CA6NLI5 447 aa8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 RAB4AP20338 218 aa8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 CASP5P51878 434 aa8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 ZFP1Q6P2D0 407 aa8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 SPIRE2Q8WWL2 714 aa8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 TBCDQ9BTW9 1192 aa8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 SLC35C2Q9NQQ7 365 aa8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 KRT36O76013 467 aa8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 HIST1H2ABP04908 130 aa8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 OGNP20774 298 aaKnown RBP8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 HIST3H2AQ7L7L0 130 aa8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 HIST1H2ACQ93077 130 aa8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 AASSQ9UDR5 926 aa8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 PHGDHO43175 533 aaKnown RBP8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 REM1O75628 298 aa8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 ZBED6P86452 979 aa8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 CDKL4Q5MAI5 379 aa8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 STRA8Q7Z7C7 330 aa8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 MCCC1Q96RQ3 725 aaPredicted RBP8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 PPP1R14DQ9NXH3 145 aa8.88□□□□□ -0.99
CACNA1C-220ENST00000399655 CIB4A0PJX0 185 aa8.87□□□□□ -0.99
CACNA1C-220ENST00000399655 CCNA1P78396 465 aa8.87□□□□□ -0.99
CACNA1C-220ENST00000399655 GXYLT1Q4G148 440 aa8.87□□□□□ -0.99
CACNA1C-220ENST00000399655 HS6ST3Q8IZP7 471 aa8.87□□□□□ -0.99
CACNA1C-220ENST00000399655 FNIP1Q8TF40 1166 aa8.87□□□□□ -0.99
CACNA1C-220ENST00000399655 ACTN3Q08043 901 aaPredicted RBP8.87□□□□□ -0.99
CACNA1C-220ENST00000399655 OR52L1Q8NGH7 329 aa8.87□□□□□ -0.99
CACNA1C-220ENST00000399655 HDAC2Q92769 488 aaKnown RBP8.87□□□□□ -0.99
CACNA1C-220ENST00000399655 CDK19Q9BWU1 502 aa8.87□□□□□ -0.99
CACNA1C-220ENST00000399655 HFM1A2PYH4 1435 aa8.87□□□□□ -0.99
CACNA1C-220ENST00000399655 GTPBP6O43824 516 aaPredicted RBP8.87□□□□□ -0.99
CACNA1C-220ENST00000399655 BNIP3LO60238 219 aa8.87□□□□□ -0.99
CACNA1C-220ENST00000399655 GYS1P13807 737 aa8.87□□□□□ -0.99
CACNA1C-220ENST00000399655 HOXB6P17509 224 aaKnown RBP8.87□□□□□ -0.99
CACNA1C-220ENST00000399655 MYL9P24844 172 aa8.87□□□□□ -0.99
CACNA1C-220ENST00000399655 TAF6P49848 677 aa8.87□□□□□ -0.99
CACNA1C-220ENST00000399655 LRRC20Q8TCA0 184 aa8.87□□□□□ -0.99
CACNA1C-220ENST00000399655 SGCDQ92629 289 aa8.87□□□□□ -0.99
CACNA1C-220ENST00000399655 NDUFS3O75489 264 aa8.87□□□□□ -0.99
CACNA1C-220ENST00000399655 TCF7P36402 384 aaPredicted RBP8.87□□□□□ -0.99
CACNA1C-220ENST00000399655 RBM34P42696 430 aaKnown RBP8.87□□□□□ -0.99
CACNA1C-220ENST00000399655 IL2P60568 153 aa8.87□□□□□ -0.99
CACNA1C-220ENST00000399655 ARHGEF7Q14155 803 aa8.87□□□□□ -0.99
CACNA1C-220ENST00000399655 LONP2Q86WA8 852 aa8.87□□□□□ -0.99
CACNA1C-220ENST00000399655 HID1Q8IV36 788 aa8.87□□□□□ -0.99
CACNA1C-220ENST00000399655 YAF2Q8IY57 180 aa8.87□□□□□ -0.99
CACNA1C-220ENST00000399655 AADATQ8N5Z0 425 aa8.87□□□□□ -0.99
CACNA1C-220ENST00000399655 DESI2Q9BSY9 194 aa8.87□□□□□ -0.99
CACNA1C-220ENST00000399655 LRRC2Q9BYS8 371 aa8.87□□□□□ -0.99
CACNA1C-220ENST00000399655 ZNF224Q9NZL3 707 aa8.87□□□□□ -0.99
CACNA1C-220ENST00000399655 ZNF175Q9Y473 711 aa8.87□□□□□ -0.99
CACNA1C-220ENST00000399655 ADGRA2Q96PE1 1338 aa8.87□□□□□ -0.99
CACNA1C-220ENST00000399655 HNRNPH2P55795 449 aaKnown RBP8.87□□□□□ -0.99
CACNA1C-220ENST00000399655 NIM1KQ8IY84 436 aa8.87□□□□□ -0.99
CACNA1C-220ENST00000399655 GPD1LQ8N335 351 aa8.87□□□□□ -0.99
CACNA1C-220ENST00000399655 ZNF507Q8TCN5 953 aa8.87□□□□□ -0.99
CACNA1C-220ENST00000399655 SLC13A1Q9BZW2 595 aa8.87□□□□□ -0.99
CACNA1C-220ENST00000399655 CHRNGP07510 517 aa8.87□□□□□ -0.99
CACNA1C-220ENST00000399655 USPL1Q5W0Q7 1092 aa8.87□□□□□ -0.99
CACNA1C-220ENST00000399655 TTC27Q6P3X3 843 aa8.87□□□□□ -0.99
CACNA1C-220ENST00000399655 RDH13Q8NBN7 331 aa8.87□□□□□ -0.99
CACNA1C-220ENST00000399655 ATP6V1G3Q96LB4 118 aa8.87□□□□□ -0.99
CACNA1C-220ENST00000399655 SPOCK3Q9BQ16 436 aa8.87□□□□□ -0.99
CACNA1C-220ENST00000399655 NCKAP5LQ9HCH0 1330 aa8.87□□□□□ -0.99
CACNA1C-220ENST00000399655 S100PP25815 95 aa8.87□□□□□ -0.99
CACNA1C-220ENST00000399655 GRIK1P39086 918 aa8.87□□□□□ -0.99
CACNA1C-220ENST00000399655 ROR1Q01973 937 aa8.87□□□□□ -0.99
CACNA1C-220ENST00000399655 PTSQ03393 145 aa8.87□□□□□ -0.99
CACNA1C-220ENST00000399655 BMT2Q1RMZ1 405 aa8.87□□□□□ -0.99
CACNA1C-220ENST00000399655 AARDQ4LEZ3 155 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms