RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 ACSL3O95573 720 aa11.39□□□□□ -0.59
CACNA1C-216ENST00000399638 GYS1P13807 737 aa11.39□□□□□ -0.59
CACNA1C-216ENST00000399638 RHOAP61586 193 aa11.39□□□□□ -0.59
CACNA1C-216ENST00000399638 NOGQ13253 232 aa11.39□□□□□ -0.59
CACNA1C-216ENST00000399638 TAF13Q15543 124 aa11.39□□□□□ -0.59
CACNA1C-216ENST00000399638 PLPP4Q5VZY2 271 aa11.39□□□□□ -0.59
CACNA1C-216ENST00000399638 CAPRIN2Q6IMN6 1127 aaKnown RBP11.39□□□□□ -0.59
CACNA1C-216ENST00000399638 STX12Q86Y82 276 aa11.39□□□□□ -0.59
CACNA1C-216ENST00000399638 RAD54LQ92698 747 aa11.39□□□□□ -0.59
CACNA1C-216ENST00000399638 WDR41Q9HAD4 459 aa11.39□□□□□ -0.59
CACNA1C-216ENST00000399638 TRIM33Q9UPN9 1127 aa11.39□□□□□ -0.59
CACNA1C-216ENST00000399638 AKR1A1P14550 325 aa11.39□□□□□ -0.59
CACNA1C-216ENST00000399638 HORMAD1Q86X24 394 aa11.39□□□□□ -0.59
CACNA1C-216ENST00000399638 SCAIQ8N9R8 606 aa11.39□□□□□ -0.59
CACNA1C-216ENST00000399638 PTPRN2Q92932 1015 aa11.39□□□□□ -0.59
CACNA1C-216ENST00000399638 PGLYRP2Q96PD5 576 aa11.39□□□□□ -0.59
CACNA1C-216ENST00000399638 CNOT10Q9H9A5 744 aaKnown RBP11.39□□□□□ -0.59
CACNA1C-216ENST00000399638 GPSM3Q9Y4H4 160 aa11.39□□□□□ -0.59
CACNA1C-216ENST00000399638 CYB561D2O14569 222 aa11.39□□□□□ -0.59
CACNA1C-216ENST00000399638 TBX3O15119 743 aa11.39□□□□□ -0.59
CACNA1C-216ENST00000399638 MTRF1O75570 445 aaKnown RBP11.39□□□□□ -0.59
CACNA1C-216ENST00000399638 KRT38O76015 456 aa11.39□□□□□ -0.59
CACNA1C-216ENST00000399638 FEN1P39748 380 aaKnown RBP11.39□□□□□ -0.59
CACNA1C-216ENST00000399638 PTPN12Q05209 780 aaKnown RBP11.39□□□□□ -0.59
CACNA1C-216ENST00000399638 ZNF746Q6NUN9 644 aaPredicted RBP11.39□□□□□ -0.59
CACNA1C-216ENST00000399638 PLD3Q8IV08 490 aa11.39□□□□□ -0.59
CACNA1C-216ENST00000399638 SUGP1Q8IWZ8 645 aaKnown RBP11.39□□□□□ -0.59
CACNA1C-216ENST00000399638 CCDC197Q8NCU1 140 aa11.39□□□□□ -0.59
CACNA1C-216ENST00000399638 TLE6Q9H808 572 aa11.39□□□□□ -0.59
CACNA1C-216ENST00000399638 ZMYND8Q9ULU4 1186 aaPredicted RBP11.39□□□□□ -0.59
CACNA1C-216ENST00000399638 FKBP9O95302 570 aa11.39□□□□□ -0.59
CACNA1C-216ENST00000399638 THP07101 528 aa11.39□□□□□ -0.59
CACNA1C-216ENST00000399638 RPS7P62081 194 aaKnown RBP11.39□□□□□ -0.59
CACNA1C-216ENST00000399638 USP39Q53GS9 565 aaKnown RBP11.39□□□□□ -0.59
CACNA1C-216ENST00000399638 CENPPQ6IPU0 288 aa11.39□□□□□ -0.59
CACNA1C-216ENST00000399638 LRRC8EQ6NSJ5 796 aa11.39□□□□□ -0.59
CACNA1C-216ENST00000399638 FKBP9P1Q75LS8 142 aa11.39□□□□□ -0.59
CACNA1C-216ENST00000399638 TAF8Q7Z7C8 310 aa11.39□□□□□ -0.59
CACNA1C-216ENST00000399638 DHX40Q8IX18 779 aaKnown RBP11.39□□□□□ -0.59
CACNA1C-216ENST00000399638 DSELQ8IZU8 1212 aa11.39□□□□□ -0.59
CACNA1C-216ENST00000399638 INTS2Q9H0H0 1204 aaKnown RBP11.39□□□□□ -0.59
CACNA1C-216ENST00000399638 TLR8Q9NR97 1041 aaKnown RBP11.39□□□□□ -0.59
CACNA1C-216ENST00000399638 PARVAQ9NVD7 372 aa11.39□□□□□ -0.59
CACNA1C-216ENST00000399638 ANAPC2Q9UJX6 822 aa11.39□□□□□ -0.59
CACNA1C-216ENST00000399638 AURKCQ9UQB9 309 aa11.39□□□□□ -0.59
CACNA1C-216ENST00000399638 MSH3P20585 1137 aa11.38□□□□□ -0.59
CACNA1C-216ENST00000399638 DR1Q01658 176 aa11.38□□□□□ -0.59
CACNA1C-216ENST00000399638 XRCC4Q13426 336 aa11.38□□□□□ -0.59
CACNA1C-216ENST00000399638 BBS7Q8IWZ6 715 aa11.38□□□□□ -0.59
CACNA1C-216ENST00000399638 COLGALT2Q8IYK4 626 aa11.38□□□□□ -0.59
CACNA1C-216ENST00000399638 ZBED8Q8IZ13 594 aa11.38□□□□□ -0.59
CACNA1C-216ENST00000399638 DIS3LQ8TF46 1054 aaKnown RBP11.38□□□□□ -0.59
CACNA1C-216ENST00000399638 FAM129BQ96TA1 746 aa11.38□□□□□ -0.59
CACNA1C-216ENST00000399638 NT5C1AQ9BXI3 368 aa11.38□□□□□ -0.59
CACNA1C-216ENST00000399638 BRD9Q9H8M2 597 aa11.38□□□□□ -0.59
CACNA1C-216ENST00000399638 PRMT7Q9NVM4 692 aaPredicted RBP11.38□□□□□ -0.59
CACNA1C-216ENST00000399638 LSP1P33241 339 aa11.38□□□□□ -0.59
CACNA1C-216ENST00000399638 NT5C2P49902 561 aa11.38□□□□□ -0.59
CACNA1C-216ENST00000399638 CORO1BQ9BR76 489 aa11.38□□□□□ -0.59
CACNA1C-216ENST00000399638 TMEM245Q9H330 911 aa11.38□□□□□ -0.59
CACNA1C-216ENST00000399638 ABCB6Q9NP58 842 aa11.38□□□□□ -0.59
CACNA1C-216ENST00000399638 DPP3Q9NY33 737 aa11.38□□□□□ -0.59
CACNA1C-216ENST00000399638 EIF3DO15371 548 aaKnown RBP eCLIP11.38□□□□□ -0.59
CACNA1C-216ENST00000399638 KRT6AP02538 564 aa11.38□□□□□ -0.59
CACNA1C-216ENST00000399638 KRT6BP04259 564 aa11.38□□□□□ -0.59
CACNA1C-216ENST00000399638 EIF4A3P38919 411 aaKnown RBP11.38□□□□□ -0.59
CACNA1C-216ENST00000399638 PNPLA4P41247 253 aa11.38□□□□□ -0.59
CACNA1C-216ENST00000399638 ACADSBP45954 432 aa11.38□□□□□ -0.59
CACNA1C-216ENST00000399638 KRT6CP48668 564 aa11.38□□□□□ -0.59
CACNA1C-216ENST00000399638 UBXN2BQ14CS0 331 aa11.38□□□□□ -0.59
CACNA1C-216ENST00000399638 E2F4Q16254 413 aa11.38□□□□□ -0.59
CACNA1C-216ENST00000399638 C6orf10Q5SRN2 563 aa11.38□□□□□ -0.59
CACNA1C-216ENST00000399638 MRPL9Q9BYD2 267 aaKnown RBP11.38□□□□□ -0.59
CACNA1C-216ENST00000399638 QRICH2Q9H0J4 1663 aa11.38□□□□□ -0.59
CACNA1C-216ENST00000399638 C2orf81A6NN90 581 aa11.38□□□□□ -0.59
CACNA1C-216ENST00000399638 LARGE1O95461 756 aa11.38□□□□□ -0.59
CACNA1C-216ENST00000399638 IFNA16P05015 189 aa11.38□□□□□ -0.59
CACNA1C-216ENST00000399638 C2orf54Q08AI8 447 aa11.38□□□□□ -0.59
CACNA1C-216ENST00000399638 ACAP2Q15057 778 aa11.38□□□□□ -0.59
CACNA1C-216ENST00000399638 TTLL9Q3SXZ7 439 aa11.38□□□□□ -0.59
CACNA1C-216ENST00000399638 TTC23Q5W5X9 447 aa11.38□□□□□ -0.59
CACNA1C-216ENST00000399638 PPP2R2DQ66LE6 453 aa11.38□□□□□ -0.59
CACNA1C-216ENST00000399638 TRIM65Q6PJ69 517 aa11.38□□□□□ -0.59
CACNA1C-216ENST00000399638 CDR2LQ86X02 465 aaPredicted RBP11.38□□□□□ -0.59
CACNA1C-216ENST00000399638 COL23A1Q86Y22 540 aaPredicted RBP11.38□□□□□ -0.59
CACNA1C-216ENST00000399638 ST13P4Q8IZP2 240 aaPredicted RBP11.38□□□□□ -0.59
CACNA1C-216ENST00000399638 ZNF579Q8NAF0 562 aaKnown RBP11.38□□□□□ -0.59
CACNA1C-216ENST00000399638 BLOC1S5Q8TDH9 187 aa11.38□□□□□ -0.59
CACNA1C-216ENST00000399638 MED8Q96G25 268 aa11.38□□□□□ -0.59
CACNA1C-216ENST00000399638 TSC22D3Q99576 134 aa11.38□□□□□ -0.59
CACNA1C-216ENST00000399638 WDCPQ9H6R7 721 aa11.38□□□□□ -0.59
CACNA1C-216ENST00000399638 ELOVL2Q9NXB9 296 aa11.38□□□□□ -0.59
CACNA1C-216ENST00000399638 A2ML1A8K2U0 1454 aa11.38□□□□□ -0.59
CACNA1C-216ENST00000399638 CBX4O00257 560 aa11.38□□□□□ -0.59
CACNA1C-216ENST00000399638 KPNA3O00505 521 aaPredicted RBP11.38□□□□□ -0.59
CACNA1C-216ENST00000399638 SPAG7O75391 227 aa11.38□□□□□ -0.59
CACNA1C-216ENST00000399638 SRBD1Q8N5C6 995 aaKnown RBP11.38□□□□□ -0.59
CACNA1C-216ENST00000399638 ZNF564Q8TBZ8 553 aaPredicted RBP11.38□□□□□ -0.59
CACNA1C-216ENST00000399638 ARNTL2Q8WYA1 636 aa11.38□□□□□ -0.59
CACNA1C-216ENST00000399638 TSPAN17Q96FV3 270 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms