RNA–Protein interactions for RNA: ENST00000399637.5

CACNA1C-215, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-215ENST00000399637 TTC39BQ5VTQ0 682 aaPredicted RBP11.48□□□□□ -0.57
CACNA1C-215ENST00000399637 ATP6V0D2Q8N8Y2 350 aa11.48□□□□□ -0.57
CACNA1C-215ENST00000399637 RNASE11Q8TAA1 199 aaKnown RBP11.48□□□□□ -0.57
CACNA1C-215ENST00000399637 ZNF512BQ96KM6 892 aaPredicted RBP11.48□□□□□ -0.57
CACNA1C-215ENST00000399637 XPNPEP3Q9NQH7 507 aa11.48□□□□□ -0.57
CACNA1C-215ENST00000399637 USP32Q8NFA0 1604 aa11.48□□□□□ -0.57
CACNA1C-215ENST00000399637 CPDO75976 1380 aa11.48□□□□□ -0.57
CACNA1C-215ENST00000399637 CYP7B1O75881 506 aa11.48□□□□□ -0.57
CACNA1C-215ENST00000399637 ATP12AP54707 1039 aa11.48□□□□□ -0.57
CACNA1C-215ENST00000399637 MARSP56192 900 aaKnown RBP11.48□□□□□ -0.57
CACNA1C-215ENST00000399637 EFL1Q7Z2Z2 1120 aaKnown RBP11.48□□□□□ -0.57
CACNA1C-215ENST00000399637 LONP2Q86WA8 852 aa11.48□□□□□ -0.57
CACNA1C-215ENST00000399637 DHX40Q8IX18 779 aaKnown RBP11.48□□□□□ -0.57
CACNA1C-215ENST00000399637 OXER1Q8TDS5 423 aa11.48□□□□□ -0.57
CACNA1C-215ENST00000399637 THAP11Q96EK4 314 aa11.48□□□□□ -0.57
CACNA1C-215ENST00000399637 TRPM5Q9NZQ8 1165 aa11.48□□□□□ -0.57
CACNA1C-215ENST00000399637 SMG5Q9UPR3 1016 aaKnown RBP11.48□□□□□ -0.57
CACNA1C-215ENST00000399637 TNFSF13BQ9Y275 285 aa11.48□□□□□ -0.57
CACNA1C-215ENST00000399637 SPHKAPQ2M3C7 1700 aa11.48□□□□□ -0.57
CACNA1C-215ENST00000399637 LRRIQ1Q96JM4 1722 aa11.48□□□□□ -0.57
CACNA1C-215ENST00000399637 NPHP3-ACAD11A0A0J9YXS1 232 aa11.48□□□□□ -0.57
CACNA1C-215ENST00000399637 TRIM49P0CI25 452 aa11.48□□□□□ -0.57
CACNA1C-215ENST00000399637 TRIM49CP0CI26 452 aa11.48□□□□□ -0.57
CACNA1C-215ENST00000399637 ARF3P61204 181 aaPredicted RBP11.48□□□□□ -0.57
CACNA1C-215ENST00000399637 ARF1P84077 181 aaKnown RBP11.48□□□□□ -0.57
CACNA1C-215ENST00000399637 CNTN1Q12860 1018 aa11.48□□□□□ -0.57
CACNA1C-215ENST00000399637 NECTIN1Q15223 517 aa11.48□□□□□ -0.57
CACNA1C-215ENST00000399637 TRIM71Q2Q1W2 868 aaKnown RBP11.48□□□□□ -0.57
CACNA1C-215ENST00000399637 ZNF284Q2VY69 593 aa11.48□□□□□ -0.57
CACNA1C-215ENST00000399637 TSGA10IPQ3SY00 556 aa11.48□□□□□ -0.57
CACNA1C-215ENST00000399637 ARSJQ5FYB0 599 aaPredicted RBP11.48□□□□□ -0.57
CACNA1C-215ENST00000399637 SPATA21Q7Z572 469 aa11.48□□□□□ -0.57
CACNA1C-215ENST00000399637 VPS50Q96JG6 964 aa11.48□□□□□ -0.57
CACNA1C-215ENST00000399637 GLIS2Q9BZE0 524 aaPredicted RBP11.48□□□□□ -0.57
CACNA1C-215ENST00000399637 UBAP1Q9NZ09 502 aa11.48□□□□□ -0.57
CACNA1C-215ENST00000399637 PHF2O75151 1096 aa11.47□□□□□ -0.57
CACNA1C-215ENST00000399637 RCAN1P53805 252 aa11.47□□□□□ -0.57
CACNA1C-215ENST00000399637 DEFA1P59665 94 aa11.47□□□□□ -0.57
CACNA1C-215ENST00000399637 DEFA3P59666 94 aa11.47□□□□□ -0.57
CACNA1C-215ENST00000399637 PIGHQ14442 188 aaPredicted RBP11.47□□□□□ -0.57
CACNA1C-215ENST00000399637 SRLQ86TD4 932 aa11.47□□□□□ -0.57
CACNA1C-215ENST00000399637 STAMBPL1Q96FJ0 436 aa11.47□□□□□ -0.57
CACNA1C-215ENST00000399637 UBE2OQ9C0C9 1292 aaKnown RBP11.47□□□□□ -0.57
CACNA1C-215ENST00000399637 BRD8Q9H0E9 1235 aa11.47□□□□□ -0.57
CACNA1C-215ENST00000399637 LY9Q9HBG7 655 aa11.47□□□□□ -0.57
CACNA1C-215ENST00000399637 PRR12Q9ULL5 1215 aa11.47□□□□□ -0.57
CACNA1C-215ENST00000399637 PNMA8BQ9ULN7 279 aaPredicted RBP11.47□□□□□ -0.57
CACNA1C-215ENST00000399637 FHOD1Q9Y613 1164 aa11.47□□□□□ -0.57
CACNA1C-215ENST00000399637 PITPNM2Q9BZ72 1349 aa11.47□□□□□ -0.57
CACNA1C-215ENST00000399637 HEATR9A2RTY3 570 aa11.47□□□□□ -0.57
CACNA1C-215ENST00000399637 AMD1P17707 334 aa11.47□□□□□ -0.57
CACNA1C-215ENST00000399637 AASDHQ4L235 1098 aaPredicted RBP11.47□□□□□ -0.57
CACNA1C-215ENST00000399637 ARHGAP17Q68EM7 881 aa11.47□□□□□ -0.57
CACNA1C-215ENST00000399637 TBC1D16Q8TBP0 767 aa11.47□□□□□ -0.57
CACNA1C-215ENST00000399637 CPA5Q8WXQ8 436 aa11.47□□□□□ -0.57
CACNA1C-215ENST00000399637 NMRK2Q9NPI5 230 aa11.47□□□□□ -0.57
CACNA1C-215ENST00000399637 F5H5T6 163 aa11.47□□□□□ -0.57
CACNA1C-215ENST00000399637 TK2O00142 265 aa11.47□□□□□ -0.57
CACNA1C-215ENST00000399637 FGFR2P21802 821 aa11.47□□□□□ -0.57
CACNA1C-215ENST00000399637 ANXA11P50995 505 aaKnown RBP11.47□□□□□ -0.57
CACNA1C-215ENST00000399637 PTK6Q13882 451 aa11.47□□□□□ -0.57
CACNA1C-215ENST00000399637 RBM43Q6ZSC3 357 aaKnown RBP11.47□□□□□ -0.57
CACNA1C-215ENST00000399637 COMMD2Q86X83 199 aa11.47□□□□□ -0.57
CACNA1C-215ENST00000399637 MMGT1Q8N4V1 131 aa11.47□□□□□ -0.57
CACNA1C-215ENST00000399637 HNRNPLLQ8WVV9 542 aaKnown RBP11.47□□□□□ -0.57
CACNA1C-215ENST00000399637 SNX6Q9UNH7 406 aa11.47□□□□□ -0.57
CACNA1C-215ENST00000399637 AXIN2Q9Y2T1 843 aa11.47□□□□□ -0.57
CACNA1C-215ENST00000399637 TLK2Q86UE8 772 aa11.47□□□□□ -0.57
CACNA1C-215ENST00000399637 VPS37AQ8NEZ2 397 aa11.47□□□□□ -0.57
CACNA1C-215ENST00000399637 LPAR1Q92633 364 aa11.47□□□□□ -0.57
CACNA1C-215ENST00000399637 MCEEQ96PE7 176 aa11.47□□□□□ -0.57
CACNA1C-215ENST00000399637 NPHS2Q9NP85 383 aa11.47□□□□□ -0.57
CACNA1C-215ENST00000399637 PCMTD2Q9NV79 361 aa11.47□□□□□ -0.57
CACNA1C-215ENST00000399637 ZC3H7BQ9UGR2 993 aaKnown RBP11.47□□□□□ -0.57
CACNA1C-215ENST00000399637 ATP6V1HQ9UI12 483 aa11.47□□□□□ -0.57
CACNA1C-215ENST00000399637 MAFFQ9ULX9 164 aa11.47□□□□□ -0.57
CACNA1C-215ENST00000399637 USP42Q9H9J4 1324 aaKnown RBP11.47□□□□□ -0.57
CACNA1C-215ENST00000399637 TCP11X1B4DZS4 312 aa11.47□□□□□ -0.57
CACNA1C-215ENST00000399637 ITGAXP20702 1163 aa11.47□□□□□ -0.57
CACNA1C-215ENST00000399637 NUP62P37198 522 aaPredicted RBP11.47□□□□□ -0.57
CACNA1C-215ENST00000399637 ZNF200P98182 395 aaPredicted RBP11.47□□□□□ -0.57
CACNA1C-215ENST00000399637 SGSM1Q2NKQ1 1148 aa11.47□□□□□ -0.57
CACNA1C-215ENST00000399637 DOK6Q6PKX4 331 aa11.47□□□□□ -0.57
CACNA1C-215ENST00000399637 IPCEF1Q8WWN9 437 aaPredicted RBP11.47□□□□□ -0.57
CACNA1C-215ENST00000399637 IL17RAQ96F46 866 aa11.47□□□□□ -0.57
CACNA1C-215ENST00000399637 RBBP8Q99708 897 aa11.47□□□□□ -0.57
CACNA1C-215ENST00000399637 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.47□□□□□ -0.57
CACNA1C-215ENST00000399637 KLHL3Q9UH77 587 aa11.47□□□□□ -0.57
CACNA1C-215ENST00000399637 CLTCL1P53675 1640 aa11.46□□□□□ -0.57
CACNA1C-215ENST00000399637 IQCMA0A1B0GVH7 501 aa11.46□□□□□ -0.57
CACNA1C-215ENST00000399637 CHI3L1P36222 383 aaPredicted RBP11.46□□□□□ -0.57
CACNA1C-215ENST00000399637 AMHR2Q16671 573 aa11.46□□□□□ -0.57
CACNA1C-215ENST00000399637 GOLGA7BQ2TAP0 167 aa11.46□□□□□ -0.57
CACNA1C-215ENST00000399637 POTEAQ6S8J7 498 aa11.46□□□□□ -0.57
CACNA1C-215ENST00000399637 FAR2Q96K12 515 aa11.46□□□□□ -0.57
CACNA1C-215ENST00000399637 BBS2Q9BXC9 721 aa11.46□□□□□ -0.57
CACNA1C-215ENST00000399637 KLHL31Q9H511 634 aa11.46□□□□□ -0.57
CACNA1C-215ENST00000399637 CERS4Q9HA82 394 aa11.46□□□□□ -0.57
CACNA1C-215ENST00000399637 MRGBPQ9NV56 204 aa11.46□□□□□ -0.57
CACNA1C-215ENST00000399637 PSMC3IPQ9P2W1 217 aaPredicted RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms